Protein–RNA interactions for Protein: P56199

ITGA1, Integrin alpha-1, humanhuman

Predictions only

Length 1,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1P56199 RNU2-40P-201ENST00000410833 196 ntBASIC1.95□□□□□ -2.1
ITGA1P56199 RNU6-521P-201ENST00000516663 105 ntBASIC1.95□□□□□ -2.1
ITGA1P56199 RNU6-762P-201ENST00000517107 102 ntBASIC1.95□□□□□ -2.1
ITGA1P56199 AL627230.6-201ENST00000611129 280 ntBASIC1.95□□□□□ -2.1
ITGA1P56199 Z97988.1-201ENST00000637697 135 ntBASIC1.95□□□□□ -2.1
ITGA1P56199 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
ITGA1P56199 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
ITGA1P56199 Y_RNA.140-201ENST00000363474 103 ntBASIC1.94□□□□□ -2.1
ITGA1P56199 Y_RNA.338-201ENST00000365320 114 ntBASIC1.94□□□□□ -2.1
ITGA1P56199 Y_RNA.377-201ENST00000365644 108 ntBASIC1.94□□□□□ -2.1
ITGA1P56199 MIR653-201ENST00000385279 96 ntBASIC1.94□□□□□ -2.1
ITGA1P56199 AC245047.7-201ENST00000440265 293 ntBASIC1.94□□□□□ -2.1
ITGA1P56199 RNU6-322P-201ENST00000516010 103 ntBASIC1.94□□□□□ -2.1
ITGA1P56199 RNU6-1018P-201ENST00000516577 106 ntBASIC1.94□□□□□ -2.1
ITGA1P56199 Y_RNA.783-201ENST00000613546 102 ntBASIC1.94□□□□□ -2.1
ITGA1P56199 MIR8065-201ENST00000620577 100 ntBASIC1.94□□□□□ -2.1
ITGA1P56199 ZNF355P-201ENST00000427301 3216 ntBASIC1.94□□□□□ -2.1
ITGA1P56199 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
ITGA1P56199 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
ITGA1P56199 RNU6-170P-201ENST00000362832 104 ntBASIC1.93□□□□□ -2.1
ITGA1P56199 Y_RNA.354-201ENST00000365448 111 ntBASIC1.93□□□□□ -2.1
ITGA1P56199 RNU6-1201P-201ENST00000384227 107 ntBASIC1.93□□□□□ -2.1
ITGA1P56199 RNU6-342P-201ENST00000384521 104 ntBASIC1.93□□□□□ -2.1
ITGA1P56199 SNORA26.2-201ENST00000390922 122 ntBASIC1.93□□□□□ -2.1
ITGA1P56199 RNA5SP247-201ENST00000411181 105 ntBASIC1.93□□□□□ -2.1
ITGA1P56199 AC096949.1-201ENST00000412047 152 ntBASIC1.93□□□□□ -2.1
ITGA1P56199 HMGN2P38-201ENST00000423806 265 ntBASIC1.93□□□□□ -2.1
ITGA1P56199 AC004941.2-201ENST00000427009 228 ntBASIC1.93□□□□□ -2.1
ITGA1P56199 RNU6-795P-201ENST00000516323 103 ntBASIC1.93□□□□□ -2.1
ITGA1P56199 CYP3A52P-201ENST00000563326 91 ntBASIC1.93□□□□□ -2.1
ITGA1P56199 MIR3935-201ENST00000583472 104 ntBASIC1.93□□□□□ -2.1
ITGA1P56199 AP000942.3-201ENST00000603702 160 ntBASIC1.93□□□□□ -2.1
ITGA1P56199 AC012531.4-201ENST00000616509 177 ntBASIC1.93□□□□□ -2.1
ITGA1P56199 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
ITGA1P56199 SNORA18-201ENST00000384416 132 ntBASIC1.92□□□□□ -2.1
ITGA1P56199 AL451046.2-201ENST00000403074 277 ntBASIC1.92□□□□□ -2.1
ITGA1P56199 AC019129.1-201ENST00000403786 261 ntBASIC1.92□□□□□ -2.1
ITGA1P56199 RNY4P29-201ENST00000410801 97 ntBASIC1.92□□□□□ -2.1
ITGA1P56199 RNU6-602P-201ENST00000411155 105 ntBASIC1.92□□□□□ -2.1
ITGA1P56199 AL161935.2-201ENST00000414627 60 ntBASIC1.92□□□□□ -2.1
ITGA1P56199 RNU7-61P-201ENST00000515897 61 ntBASIC1.92□□□□□ -2.1
ITGA1P56199 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.92□□□□□ -2.1
ITGA1P56199 AL096840.1-201ENST00000603287 93 ntBASIC1.92□□□□□ -2.1
ITGA1P56199 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.92□□□□□ -2.1
ITGA1P56199 MIR4251-201ENST00000635819 61 ntBASIC1.92□□□□□ -2.1
ITGA1P56199 AL512310.12-203ENST00000640543 90 ntBASIC1.92□□□□□ -2.1
ITGA1P56199 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
ITGA1P56199 RNU6-1313P-201ENST00000362622 102 ntBASIC1.91□□□□□ -2.1
ITGA1P56199 SNORD45B-201ENST00000364617 72 ntBASIC1.91□□□□□ -2.1
ITGA1P56199 RNA5SP259-201ENST00000365541 109 ntBASIC1.91□□□□□ -2.1
ITGA1P56199 MIR583-201ENST00000384846 75 ntBASIC1.91□□□□□ -2.1
ITGA1P56199 MIR513A1-201ENST00000385138 129 ntBASIC1.91□□□□□ -2.1
ITGA1P56199 RNA5SP212-201ENST00000391223 107 ntBASIC1.91□□□□□ -2.1
ITGA1P56199 JTBP1-201ENST00000441314 247 ntBASIC1.91□□□□□ -2.1
ITGA1P56199 RNU7-35P-201ENST00000517174 62 ntBASIC1.91□□□□□ -2.1
ITGA1P56199 MIR548AO-201ENST00000579992 96 ntBASIC1.91□□□□□ -2.1
ITGA1P56199 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
ITGA1P56199 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
ITGA1P56199 RNU1-17P-201ENST00000363022 152 ntBASIC1.9□□□□□ -2.11
ITGA1P56199 Y_RNA.290-201ENST00000364879 114 ntBASIC1.9□□□□□ -2.11
ITGA1P56199 SNORD115-35-201ENST00000365122 82 ntBASIC1.9□□□□□ -2.11
ITGA1P56199 RNU6-644P-201ENST00000391155 98 ntBASIC1.9□□□□□ -2.11
ITGA1P56199 RNU7-41P-201ENST00000515917 61 ntBASIC1.9□□□□□ -2.11
ITGA1P56199 Y_RNA.659-201ENST00000515994 113 ntBASIC1.9□□□□□ -2.11
ITGA1P56199 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.9□□□□□ -2.11
ITGA1P56199 MIR6845-201ENST00000613182 61 ntBASIC1.9□□□□□ -2.11
ITGA1P56199 uc_338.20-201ENST00000621563 178 ntBASIC1.9□□□□□ -2.11
ITGA1P56199 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.9□□□□□ -2.11
ITGA1P56199 AC091304.10-201ENST00000641554 121 ntBASIC1.9□□□□□ -2.11
ITGA1P56199 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
ITGA1P56199 Y_RNA.4-201ENST00000362333 112 ntBASIC1.89□□□□□ -2.11
ITGA1P56199 Y_RNA.164-201ENST00000363709 102 ntBASIC1.89□□□□□ -2.11
ITGA1P56199 Y_RNA.388-201ENST00000383919 113 ntBASIC1.89□□□□□ -2.11
ITGA1P56199 RNU6-439P-201ENST00000384188 106 ntBASIC1.89□□□□□ -2.11
ITGA1P56199 HMGN2P19-201ENST00000425149 265 ntBASIC1.89□□□□□ -2.11
ITGA1P56199 AC108729.3-201ENST00000513484 108 ntBASIC1.89□□□□□ -2.11
ITGA1P56199 RNU7-2P-201ENST00000516096 62 ntBASIC1.89□□□□□ -2.11
ITGA1P56199 SNORD111.1-201ENST00000516421 86 ntBASIC1.89□□□□□ -2.11
ITGA1P56199 MIR4448-201ENST00000584360 86 ntBASIC1.89□□□□□ -2.11
ITGA1P56199 MIR548Z-201ENST00000584743 97 ntBASIC1.89□□□□□ -2.11
ITGA1P56199 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.89□□□□□ -2.11
ITGA1P56199 AC096720.1-201ENST00000604441 183 ntBASIC1.89□□□□□ -2.11
ITGA1P56199 AL773524.1-201ENST00000614065 229 ntBASIC1.89□□□□□ -2.11
ITGA1P56199 Y_RNA.95-201ENST00000363079 95 ntBASIC1.88□□□□□ -2.11
ITGA1P56199 RNU6-60P-201ENST00000364792 103 ntBASIC1.88□□□□□ -2.11
ITGA1P56199 RNU6-1134P-201ENST00000365156 101 ntBASIC1.88□□□□□ -2.11
ITGA1P56199 MIR206-201ENST00000384872 86 ntBASIC1.88□□□□□ -2.11
ITGA1P56199 AC244636.1-201ENST00000421152 228 ntBASIC1.88□□□□□ -2.11
ITGA1P56199 MRPL35P3-201ENST00000421557 364 ntBASIC1.88□□□□□ -2.11
ITGA1P56199 AC090844.1-201ENST00000422019 156 ntBASIC1.88□□□□□ -2.11
ITGA1P56199 RN7SL274P-201ENST00000492268 272 ntBASIC1.88□□□□□ -2.11
ITGA1P56199 AC026421.1-201ENST00000519101 163 ntBASIC1.88□□□□□ -2.11
ITGA1P56199 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.88□□□□□ -2.11
ITGA1P56199 MIR4777-201ENST00000583710 86 ntBASIC1.88□□□□□ -2.11
ITGA1P56199 AC062037.1-201ENST00000605302 128 ntBASIC1.88□□□□□ -2.11
ITGA1P56199 U7.3-201ENST00000616123 62 ntBASIC1.88□□□□□ -2.11
ITGA1P56199 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.88□□□□□ -2.11
ITGA1P56199 Y_RNA.96-201ENST00000363092 109 ntBASIC1.87□□□□□ -2.11
ITGA1P56199 RNA5SP48-201ENST00000363969 126 ntBASIC1.87□□□□□ -2.11
ITGA1P56199 SNORD41-201ENST00000386967 70 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms