Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RNU4-16P-201ENST00000364737 141 ntBASIC0.13□□□□□ -2.39
CX3CR1P49238 Y_RNA.277-201ENST00000364754 102 ntBASIC0.13□□□□□ -2.39
CX3CR1P49238 RNU4-17P-201ENST00000365598 141 ntBASIC0.13□□□□□ -2.39
CX3CR1P49238 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
CX3CR1P49238 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
CX3CR1P49238 MIR1287-201ENST00000408492 90 ntBASIC0.13□□□□□ -2.39
CX3CR1P49238 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.13□□□□□ -2.39
CX3CR1P49238 Y_RNA.679-201ENST00000516416 91 ntBASIC0.13□□□□□ -2.39
CX3CR1P49238 AP003072.1-201ENST00000531740 145 ntBASIC0.13□□□□□ -2.39
CX3CR1P49238 MTND5P34-201ENST00000568888 325 ntBASIC0.13□□□□□ -2.39
CX3CR1P49238 MIR7107-201ENST00000611489 80 ntBASIC0.13□□□□□ -2.39
CX3CR1P49238 AC022709.1-201ENST00000615967 87 ntBASIC0.13□□□□□ -2.39
CX3CR1P49238 MIR6755-201ENST00000619993 66 ntBASIC0.13□□□□□ -2.39
CX3CR1P49238 RNY1P13-201ENST00000365030 105 ntBASIC0.12□□□□□ -2.39
CX3CR1P49238 Y_RNA.354-201ENST00000365448 111 ntBASIC0.12□□□□□ -2.39
CX3CR1P49238 RNU6-1336P-201ENST00000383886 109 ntBASIC0.12□□□□□ -2.39
CX3CR1P49238 RNU6-42P-201ENST00000384165 107 ntBASIC0.12□□□□□ -2.39
CX3CR1P49238 RNU6-291P-201ENST00000384720 107 ntBASIC0.12□□□□□ -2.39
CX3CR1P49238 RNU6-713P-201ENST00000384761 107 ntBASIC0.12□□□□□ -2.39
CX3CR1P49238 RNA5SP237-201ENST00000410414 113 ntBASIC0.12□□□□□ -2.39
CX3CR1P49238 SNORD71-201ENST00000411292 86 ntBASIC0.12□□□□□ -2.39
CX3CR1P49238 AC069271.1-201ENST00000445577 156 ntBASIC0.12□□□□□ -2.39
CX3CR1P49238 RNU7-80P-201ENST00000459562 61 ntBASIC0.12□□□□□ -2.39
CX3CR1P49238 SNORA25.16-201ENST00000516741 121 ntBASIC0.12□□□□□ -2.39
CX3CR1P49238 AC044792.1-201ENST00000593294 196 ntBASIC0.12□□□□□ -2.39
CX3CR1P49238 MTND5P32-201ENST00000560711 1802 ntBASIC0.11□□□□□ -2.39
CX3CR1P49238 Y_RNA.171-201ENST00000363760 102 ntBASIC0.11□□□□□ -2.39
CX3CR1P49238 Y_RNA.292-201ENST00000364904 97 ntBASIC0.11□□□□□ -2.39
CX3CR1P49238 RNU6-728P-201ENST00000365375 104 ntBASIC0.11□□□□□ -2.39
CX3CR1P49238 RNU6-949P-201ENST00000384040 107 ntBASIC0.11□□□□□ -2.39
CX3CR1P49238 SNORA18-201ENST00000384416 132 ntBASIC0.11□□□□□ -2.39
CX3CR1P49238 Y_RNA.574-201ENST00000384766 95 ntBASIC0.11□□□□□ -2.39
CX3CR1P49238 RNU2-38P-201ENST00000410856 79 ntBASIC0.11□□□□□ -2.39
CX3CR1P49238 RNU6-1149P-201ENST00000516810 97 ntBASIC0.11□□□□□ -2.39
CX3CR1P49238 Y_RNA.720-201ENST00000517166 92 ntBASIC0.11□□□□□ -2.39
CX3CR1P49238 AC069113.3-201ENST00000521019 150 ntBASIC0.11□□□□□ -2.39
CX3CR1P49238 AP003327.1-201ENST00000529684 127 ntBASIC0.11□□□□□ -2.39
CX3CR1P49238 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
CX3CR1P49238 RNA5SP245-201ENST00000364239 121 ntBASIC0.1□□□□□ -2.39
CX3CR1P49238 Y_RNA.326-201ENST00000365176 113 ntBASIC0.1□□□□□ -2.39
CX3CR1P49238 RNU6-187P-201ENST00000384139 106 ntBASIC0.1□□□□□ -2.39
CX3CR1P49238 RNU6-493P-201ENST00000391321 108 ntBASIC0.1□□□□□ -2.39
CX3CR1P49238 MIR1302-6-201ENST00000408466 90 ntBASIC0.1□□□□□ -2.39
CX3CR1P49238 AL512326.2-201ENST00000426359 151 ntBASIC0.1□□□□□ -2.39
CX3CR1P49238 SUMO1P3-201ENST00000439961 304 ntBASIC0.1□□□□□ -2.39
CX3CR1P49238 AL121914.1-201ENST00000450188 156 ntBASIC0.1□□□□□ -2.39
CX3CR1P49238 MTND1P19-201ENST00000511780 315 ntBASIC0.1□□□□□ -2.39
CX3CR1P49238 RNA5SP268-201ENST00000516828 124 ntBASIC0.1□□□□□ -2.39
CX3CR1P49238 Y_RNA.757-201ENST00000578934 114 ntBASIC0.1□□□□□ -2.39
CX3CR1P49238 MIR4744-201ENST00000581563 82 ntBASIC0.1□□□□□ -2.39
CX3CR1P49238 MIR6828-201ENST00000636181 60 ntBASIC0.1□□□□□ -2.39
CX3CR1P49238 Y_RNA.116-201ENST00000363292 103 ntBASIC0.09□□□□□ -2.4
CX3CR1P49238 Y_RNA.238-201ENST00000364441 102 ntBASIC0.09□□□□□ -2.4
CX3CR1P49238 Y_RNA.262-201ENST00000364641 102 ntBASIC0.09□□□□□ -2.4
CX3CR1P49238 Y_RNA.308-201ENST00000365043 101 ntBASIC0.09□□□□□ -2.4
CX3CR1P49238 Y_RNA.454-201ENST00000384224 113 ntBASIC0.09□□□□□ -2.4
CX3CR1P49238 Y_RNA.470-201ENST00000384307 117 ntBASIC0.09□□□□□ -2.4
CX3CR1P49238 SNORA72.6-201ENST00000384520 129 ntBASIC0.09□□□□□ -2.4
CX3CR1P49238 Y_RNA.539-201ENST00000384635 107 ntBASIC0.09□□□□□ -2.4
CX3CR1P49238 RNU6-578P-201ENST00000390980 103 ntBASIC0.09□□□□□ -2.4
CX3CR1P49238 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
CX3CR1P49238 RNA5SP261-201ENST00000410536 106 ntBASIC0.09□□□□□ -2.4
CX3CR1P49238 AC073261.1-201ENST00000429409 121 ntBASIC0.09□□□□□ -2.4
CX3CR1P49238 RNU6-765P-201ENST00000516916 99 ntBASIC0.09□□□□□ -2.4
CX3CR1P49238 MIR4308-201ENST00000580634 81 ntBASIC0.09□□□□□ -2.4
CX3CR1P49238 MIR378D2-201ENST00000580636 98 ntBASIC0.09□□□□□ -2.4
CX3CR1P49238 RNU2-4P-201ENST00000606190 192 ntBASIC0.09□□□□□ -2.4
CX3CR1P49238 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.09□□□□□ -2.4
CX3CR1P49238 Y_RNA.54-201ENST00000362766 105 ntBASIC0.08□□□□□ -2.4
CX3CR1P49238 RNY4P28-201ENST00000365281 93 ntBASIC0.08□□□□□ -2.4
CX3CR1P49238 Y_RNA.352-201ENST00000365439 102 ntBASIC0.08□□□□□ -2.4
CX3CR1P49238 RNU6-1160P-201ENST00000384546 104 ntBASIC0.08□□□□□ -2.4
CX3CR1P49238 Y_RNA.536-201ENST00000384621 113 ntBASIC0.08□□□□□ -2.4
CX3CR1P49238 RNU2-59P-201ENST00000410482 191 ntBASIC0.08□□□□□ -2.4
CX3CR1P49238 SNORD116-25-201ENST00000516517 92 ntBASIC0.08□□□□□ -2.4
CX3CR1P49238 RNA5SP47-201ENST00000517230 109 ntBASIC0.08□□□□□ -2.4
CX3CR1P49238 MRPS18CP4-201ENST00000535821 231 ntBASIC0.08□□□□□ -2.4
CX3CR1P49238 MIR3152-201ENST00000579801 74 ntBASIC0.08□□□□□ -2.4
CX3CR1P49238 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.08□□□□□ -2.4
CX3CR1P49238 MIR924-201ENST00000638017 53 ntBASIC0.08□□□□□ -2.4
CX3CR1P49238 RNU6-103P-201ENST00000363686 107 ntBASIC0.07□□□□□ -2.4
CX3CR1P49238 SNORD28-201ENST00000384706 75 ntBASIC0.07□□□□□ -2.4
CX3CR1P49238 MIR624-201ENST00000385217 97 ntBASIC0.07□□□□□ -2.4
CX3CR1P49238 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
CX3CR1P49238 SNORA79-201ENST00000408376 140 ntBASIC0.07□□□□□ -2.4
CX3CR1P49238 RPL39P25-201ENST00000449384 154 ntBASIC0.07□□□□□ -2.4
CX3CR1P49238 AC112693.2-201ENST00000556538 232 ntBASIC0.07□□□□□ -2.4
CX3CR1P49238 RNU1-29P-201ENST00000606574 126 ntBASIC0.07□□□□□ -2.4
CX3CR1P49238 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.07□□□□□ -2.4
CX3CR1P49238 SNORD114-23-201ENST00000363536 72 ntBASIC0.06□□□□□ -2.4
CX3CR1P49238 SNORA63.5-201ENST00000363548 123 ntBASIC0.06□□□□□ -2.4
CX3CR1P49238 RNU6-923P-201ENST00000364753 107 ntBASIC0.06□□□□□ -2.4
CX3CR1P49238 Y_RNA.366-201ENST00000365540 102 ntBASIC0.06□□□□□ -2.4
CX3CR1P49238 SNORA20-201ENST00000384662 132 ntBASIC0.06□□□□□ -2.4
CX3CR1P49238 RNU6-535P-201ENST00000384722 107 ntBASIC0.06□□□□□ -2.4
CX3CR1P49238 PCNPP3-201ENST00000393579 471 ntBASIC0.06□□□□□ -2.4
CX3CR1P49238 RNA5SP127-201ENST00000411051 133 ntBASIC0.06□□□□□ -2.4
CX3CR1P49238 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.06□□□□□ -2.4
CX3CR1P49238 MTND2P23-201ENST00000422990 651 ntBASIC0.06□□□□□ -2.4
CX3CR1P49238 AC108059.2-201ENST00000434626 151 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms