Protein–RNA interactions for Protein: P47972

NPTX2, Neuronal pentraxin-2, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX2P47972 MIR6129-201ENST00000616087 109 ntBASIC1.53□□□□□ -2.16
NPTX2P47972 RNU6-215P-201ENST00000365169 102 ntBASIC1.52□□□□□ -2.17
NPTX2P47972 SNORD20-201ENST00000384550 80 ntBASIC1.52□□□□□ -2.17
NPTX2P47972 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.52□□□□□ -2.17
NPTX2P47972 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.52□□□□□ -2.17
NPTX2P47972 RPS3AP1-201ENST00000413190 320 ntBASIC1.52□□□□□ -2.17
NPTX2P47972 RNU6-893P-201ENST00000458841 100 ntBASIC1.52□□□□□ -2.17
NPTX2P47972 RNU1-92P-201ENST00000517017 135 ntBASIC1.52□□□□□ -2.17
NPTX2P47972 MIR4421-201ENST00000578133 69 ntBASIC1.52□□□□□ -2.17
NPTX2P47972 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
NPTX2P47972 SNORA25.3-201ENST00000363205 127 ntBASIC1.51□□□□□ -2.17
NPTX2P47972 Y_RNA.213-201ENST00000364178 111 ntBASIC1.51□□□□□ -2.17
NPTX2P47972 RNU6-1325P-201ENST00000364905 105 ntBASIC1.51□□□□□ -2.17
NPTX2P47972 Y_RNA.531-201ENST00000384589 121 ntBASIC1.51□□□□□ -2.17
NPTX2P47972 MIR548A1-201ENST00000385041 97 ntBASIC1.51□□□□□ -2.17
NPTX2P47972 MIR1302-7-201ENST00000408841 72 ntBASIC1.51□□□□□ -2.17
NPTX2P47972 RNU6-602P-201ENST00000411155 105 ntBASIC1.51□□□□□ -2.17
NPTX2P47972 RNU7-113P-201ENST00000459273 62 ntBASIC1.51□□□□□ -2.17
NPTX2P47972 RNA5SP61-201ENST00000516453 100 ntBASIC1.51□□□□□ -2.17
NPTX2P47972 CYP3A52P-201ENST00000563326 91 ntBASIC1.51□□□□□ -2.17
NPTX2P47972 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
NPTX2P47972 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
NPTX2P47972 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.5□□□□□ -2.17
NPTX2P47972 AP003716.2-201ENST00000528260 108 ntBASIC1.5□□□□□ -2.17
NPTX2P47972 MIR8065-201ENST00000620577 100 ntBASIC1.5□□□□□ -2.17
NPTX2P47972 SNORD115-2-201ENST00000362842 82 ntBASIC1.49□□□□□ -2.17
NPTX2P47972 SNORD115-20-201ENST00000365099 82 ntBASIC1.49□□□□□ -2.17
NPTX2P47972 Y_RNA.470-201ENST00000384307 117 ntBASIC1.49□□□□□ -2.17
NPTX2P47972 SNORD116-21-201ENST00000384507 92 ntBASIC1.49□□□□□ -2.17
NPTX2P47972 RNU6-955P-201ENST00000410497 104 ntBASIC1.49□□□□□ -2.17
NPTX2P47972 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.49□□□□□ -2.17
NPTX2P47972 AL133373.1-201ENST00000497098 94 ntBASIC1.49□□□□□ -2.17
NPTX2P47972 AC113410.1-201ENST00000505029 247 ntBASIC1.49□□□□□ -2.17
NPTX2P47972 PRELID3BP2-201ENST00000605362 201 ntBASIC1.49□□□□□ -2.17
NPTX2P47972 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.49□□□□□ -2.17
NPTX2P47972 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
NPTX2P47972 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.48□□□□□ -2.17
NPTX2P47972 SNORA7.1-201ENST00000363750 139 ntBASIC1.48□□□□□ -2.17
NPTX2P47972 MIR759-201ENST00000390224 91 ntBASIC1.48□□□□□ -2.17
NPTX2P47972 AC245047.7-201ENST00000440265 293 ntBASIC1.48□□□□□ -2.17
NPTX2P47972 RPS23P4-201ENST00000487908 423 ntBASIC1.48□□□□□ -2.17
NPTX2P47972 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.48□□□□□ -2.17
NPTX2P47972 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.48□□□□□ -2.17
NPTX2P47972 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.48□□□□□ -2.17
NPTX2P47972 Y_RNA.35-201ENST00000362601 101 ntBASIC1.47□□□□□ -2.17
NPTX2P47972 SNORD38B-201ENST00000384690 67 ntBASIC1.47□□□□□ -2.17
NPTX2P47972 RNU1-123P-201ENST00000458950 160 ntBASIC1.47□□□□□ -2.17
NPTX2P47972 AC004223.1-201ENST00000479840 271 ntBASIC1.47□□□□□ -2.17
NPTX2P47972 RNU6-589P-201ENST00000516485 107 ntBASIC1.47□□□□□ -2.17
NPTX2P47972 RN7SKP88-201ENST00000516847 250 ntBASIC1.47□□□□□ -2.17
NPTX2P47972 AC007012.1-201ENST00000567192 175 ntBASIC1.47□□□□□ -2.17
NPTX2P47972 MIR3163-201ENST00000581592 73 ntBASIC1.47□□□□□ -2.17
NPTX2P47972 snoU13.31-201ENST00000607291 104 ntBASIC1.47□□□□□ -2.17
NPTX2P47972 7SK.8-201ENST00000612110 250 ntBASIC1.47□□□□□ -2.17
NPTX2P47972 7SK.11-201ENST00000615477 250 ntBASIC1.47□□□□□ -2.17
NPTX2P47972 7SK.13-201ENST00000622040 250 ntBASIC1.47□□□□□ -2.17
NPTX2P47972 SNORD38B-202ENST00000625943 69 ntBASIC1.47□□□□□ -2.17
NPTX2P47972 AL391516.1-201ENST00000554380 2449 ntBASIC1.47□□□□□ -2.17
NPTX2P47972 MIR26B-201ENST00000362251 77 ntBASIC1.46□□□□□ -2.18
NPTX2P47972 RNA5SP264-201ENST00000363115 107 ntBASIC1.46□□□□□ -2.18
NPTX2P47972 Y_RNA.354-201ENST00000365448 111 ntBASIC1.46□□□□□ -2.18
NPTX2P47972 RNU6-880P-201ENST00000384526 107 ntBASIC1.46□□□□□ -2.18
NPTX2P47972 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.46□□□□□ -2.18
NPTX2P47972 MIR1185-1-201ENST00000408598 86 ntBASIC1.46□□□□□ -2.18
NPTX2P47972 RNA5SP33-201ENST00000516687 98 ntBASIC1.46□□□□□ -2.18
NPTX2P47972 RNU6-919P-201ENST00000516731 104 ntBASIC1.46□□□□□ -2.18
NPTX2P47972 MIR548AE2-201ENST00000583456 67 ntBASIC1.46□□□□□ -2.18
NPTX2P47972 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.46□□□□□ -2.18
NPTX2P47972 MIR103A2-201ENST00000362154 78 ntBASIC1.45□□□□□ -2.18
NPTX2P47972 RNY4P6-201ENST00000363667 96 ntBASIC1.45□□□□□ -2.18
NPTX2P47972 Y_RNA.549-201ENST00000384657 102 ntBASIC1.45□□□□□ -2.18
NPTX2P47972 AC244023.1-201ENST00000426884 112 ntBASIC1.45□□□□□ -2.18
NPTX2P47972 RNU7-6P-201ENST00000516845 62 ntBASIC1.45□□□□□ -2.18
NPTX2P47972 Y_RNA.709-201ENST00000516952 92 ntBASIC1.45□□□□□ -2.18
NPTX2P47972 MIR4498-201ENST00000577599 66 ntBASIC1.45□□□□□ -2.18
NPTX2P47972 AC242498.1-201ENST00000604134 111 ntBASIC1.45□□□□□ -2.18
NPTX2P47972 AL035470.1-201ENST00000622571 220 ntBASIC1.45□□□□□ -2.18
NPTX2P47972 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
NPTX2P47972 Y_RNA.299-201ENST00000364973 94 ntBASIC1.44□□□□□ -2.18
NPTX2P47972 RNU6-342P-201ENST00000384521 104 ntBASIC1.44□□□□□ -2.18
NPTX2P47972 MIR548D2-201ENST00000384955 97 ntBASIC1.44□□□□□ -2.18
NPTX2P47972 SNORD12C-201ENST00000386307 89 ntBASIC1.44□□□□□ -2.18
NPTX2P47972 MIR758-201ENST00000390227 88 ntBASIC1.44□□□□□ -2.18
NPTX2P47972 RNY4P18-201ENST00000391107 89 ntBASIC1.44□□□□□ -2.18
NPTX2P47972 RNU4-69P-201ENST00000410677 143 ntBASIC1.44□□□□□ -2.18
NPTX2P47972 AL035461.1-201ENST00000421490 332 ntBASIC1.44□□□□□ -2.18
NPTX2P47972 MIR1270-201ENST00000459320 83 ntBASIC1.44□□□□□ -2.18
NPTX2P47972 AC048334.1-201ENST00000477975 159 ntBASIC1.44□□□□□ -2.18
NPTX2P47972 MIR3660-201ENST00000584845 100 ntBASIC1.44□□□□□ -2.18
NPTX2P47972 AC087741.2-201ENST00000619415 172 ntBASIC1.44□□□□□ -2.18
NPTX2P47972 RNU6-396P-201ENST00000365369 105 ntBASIC1.43□□□□□ -2.18
NPTX2P47972 Y_RNA.344-201ENST00000365381 112 ntBASIC1.43□□□□□ -2.18
NPTX2P47972 Y_RNA.362-201ENST00000365518 110 ntBASIC1.43□□□□□ -2.18
NPTX2P47972 SNORA32-201ENST00000384072 121 ntBASIC1.43□□□□□ -2.18
NPTX2P47972 RNU6-1054P-201ENST00000411293 104 ntBASIC1.43□□□□□ -2.18
NPTX2P47972 AC063976.4-201ENST00000421971 163 ntBASIC1.43□□□□□ -2.18
NPTX2P47972 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.43□□□□□ -2.18
NPTX2P47972 AC068338.1-201ENST00000565567 176 ntBASIC1.43□□□□□ -2.18
NPTX2P47972 MIR4679-2-201ENST00000578358 77 ntBASIC1.43□□□□□ -2.18
NPTX2P47972 MIR6516-201ENST00000630554 81 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms