Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.71□□□□□ -2.52
RPL28P46779 RNU4-84P-201ENST00000364200 139 ntBASIC-0.71□□□□□ -2.52
RPL28P46779 RNU4-24P-201ENST00000364565 139 ntBASIC-0.71□□□□□ -2.52
RPL28P46779 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.71□□□□□ -2.52
RPL28P46779 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.71□□□□□ -2.52
RPL28P46779 MIR224-201ENST00000384889 81 ntBASIC-0.71□□□□□ -2.52
RPL28P46779 RNU7-79P-201ENST00000516082 62 ntBASIC-0.71□□□□□ -2.52
RPL28P46779 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.71□□□□□ -2.52
RPL28P46779 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.71□□□□□ -2.52
RPL28P46779 MIR4436A-201ENST00000585278 85 ntBASIC-0.71□□□□□ -2.52
RPL28P46779 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.71□□□□□ -2.52
RPL28P46779 AC007485.1-201ENST00000616755 206 ntBASIC-0.71□□□□□ -2.52
RPL28P46779 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.72□□□□□ -2.52
RPL28P46779 PMCHL1-202ENST00000423102 261 ntBASIC-0.72□□□□□ -2.52
RPL28P46779 MTND4P19-201ENST00000446659 478 ntBASIC-0.72□□□□□ -2.52
RPL28P46779 RNU6-720P-201ENST00000516363 108 ntBASIC-0.72□□□□□ -2.52
RPL28P46779 SNORA40.14-201ENST00000516543 86 ntBASIC-0.72□□□□□ -2.52
RPL28P46779 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.72□□□□□ -2.52
RPL28P46779 RNA5SP66-201ENST00000517178 101 ntBASIC-0.72□□□□□ -2.52
RPL28P46779 AC096720.1-201ENST00000604441 183 ntBASIC-0.72□□□□□ -2.52
RPL28P46779 AC108676.2-201ENST00000605225 163 ntBASIC-0.72□□□□□ -2.52
RPL28P46779 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.73□□□□□ -2.53
RPL28P46779 RNA5SP368-201ENST00000364298 116 ntBASIC-0.73□□□□□ -2.53
RPL28P46779 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.73□□□□□ -2.53
RPL28P46779 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.73□□□□□ -2.53
RPL28P46779 RNY1P2-201ENST00000364820 117 ntBASIC-0.73□□□□□ -2.53
RPL28P46779 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.73□□□□□ -2.53
RPL28P46779 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.73□□□□□ -2.53
RPL28P46779 MIR1265-201ENST00000408444 86 ntBASIC-0.73□□□□□ -2.53
RPL28P46779 RNU6-358P-201ENST00000516564 75 ntBASIC-0.73□□□□□ -2.53
RPL28P46779 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.73□□□□□ -2.53
RPL28P46779 RNU7-188P-201ENST00000517063 64 ntBASIC-0.73□□□□□ -2.53
RPL28P46779 RNU7-35P-201ENST00000517174 62 ntBASIC-0.73□□□□□ -2.53
RPL28P46779 SNORD116.3-201ENST00000517176 78 ntBASIC-0.73□□□□□ -2.53
RPL28P46779 MIR548H5-201ENST00000580314 60 ntBASIC-0.73□□□□□ -2.53
RPL28P46779 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.73□□□□□ -2.53
RPL28P46779 AL138825.1-201ENST00000618587 192 ntBASIC-0.73□□□□□ -2.53
RPL28P46779 RNU6-845P-201ENST00000362578 103 ntBASIC-0.74□□□□□ -2.53
RPL28P46779 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.74□□□□□ -2.53
RPL28P46779 RNU6-449P-201ENST00000383914 107 ntBASIC-0.74□□□□□ -2.53
RPL28P46779 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.74□□□□□ -2.53
RPL28P46779 RNU6-35P-201ENST00000384530 107 ntBASIC-0.74□□□□□ -2.53
RPL28P46779 Y_RNA.516-201ENST00000384541 124 ntBASIC-0.74□□□□□ -2.53
RPL28P46779 RNU6-130P-201ENST00000411112 103 ntBASIC-0.74□□□□□ -2.53
RPL28P46779 AL022718.1-201ENST00000412004 84 ntBASIC-0.74□□□□□ -2.53
RPL28P46779 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.74□□□□□ -2.53
RPL28P46779 RNU6-893P-201ENST00000458841 100 ntBASIC-0.74□□□□□ -2.53
RPL28P46779 AC069439.1-201ENST00000494739 167 ntBASIC-0.74□□□□□ -2.53
RPL28P46779 MIR3920-201ENST00000581751 86 ntBASIC-0.74□□□□□ -2.53
RPL28P46779 AC025253.1-201ENST00000613623 543 ntBASIC-0.74□□□□□ -2.53
RPL28P46779 Y_RNA.3-201ENST00000362331 103 ntBASIC-0.75□□□□□ -2.53
RPL28P46779 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.75□□□□□ -2.53
RPL28P46779 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.75□□□□□ -2.53
RPL28P46779 SNORA3B-201ENST00000391305 131 ntBASIC-0.75□□□□□ -2.53
RPL28P46779 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.75□□□□□ -2.53
RPL28P46779 HSPE1P25-201ENST00000455484 251 ntBASIC-0.75□□□□□ -2.53
RPL28P46779 RNA5SP169-201ENST00000517268 117 ntBASIC-0.75□□□□□ -2.53
RPL28P46779 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.75□□□□□ -2.53
RPL28P46779 PART1_1.1-201ENST00000611761 217 ntBASIC-0.75□□□□□ -2.53
RPL28P46779 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.75□□□□□ -2.53
RPL28P46779 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.76□□□□□ -2.53
RPL28P46779 SNORD113-8-201ENST00000363497 74 ntBASIC-0.76□□□□□ -2.53
RPL28P46779 RNU4-10P-201ENST00000364383 140 ntBASIC-0.76□□□□□ -2.53
RPL28P46779 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.76□□□□□ -2.53
RPL28P46779 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.76□□□□□ -2.53
RPL28P46779 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.76□□□□□ -2.53
RPL28P46779 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.76□□□□□ -2.53
RPL28P46779 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.76□□□□□ -2.53
RPL28P46779 RNU6-102P-201ENST00000384485 104 ntBASIC-0.76□□□□□ -2.53
RPL28P46779 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.76□□□□□ -2.53
RPL28P46779 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.76□□□□□ -2.53
RPL28P46779 MIR181B2-201ENST00000385004 89 ntBASIC-0.76□□□□□ -2.53
RPL28P46779 MIR548F1-201ENST00000408667 84 ntBASIC-0.76□□□□□ -2.53
RPL28P46779 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-0.76□□□□□ -2.53
RPL28P46779 RNU6-507P-201ENST00000516045 100 ntBASIC-0.76□□□□□ -2.53
RPL28P46779 RNU6-559P-201ENST00000516151 98 ntBASIC-0.76□□□□□ -2.53
RPL28P46779 RNU6-718P-201ENST00000516166 105 ntBASIC-0.76□□□□□ -2.53
RPL28P46779 RNU6-175P-201ENST00000516896 107 ntBASIC-0.76□□□□□ -2.53
RPL28P46779 AC026407.1-201ENST00000518369 204 ntBASIC-0.76□□□□□ -2.53
RPL28P46779 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.76□□□□□ -2.53
RPL28P46779 RNU7-10P-201ENST00000607194 63 ntBASIC-0.76□□□□□ -2.53
RPL28P46779 AC098479.1-201ENST00000609225 154 ntBASIC-0.76□□□□□ -2.53
RPL28P46779 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.76□□□□□ -2.53
RPL28P46779 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.76□□□□□ -2.53
RPL28P46779 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.77□□□□□ -2.53
RPL28P46779 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.77□□□□□ -2.53
RPL28P46779 RNU1-141P-201ENST00000364623 158 ntBASIC-0.77□□□□□ -2.53
RPL28P46779 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.77□□□□□ -2.53
RPL28P46779 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.77□□□□□ -2.53
RPL28P46779 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.77□□□□□ -2.53
RPL28P46779 RNU6-455P-201ENST00000384681 107 ntBASIC-0.77□□□□□ -2.53
RPL28P46779 MIR599-201ENST00000385069 95 ntBASIC-0.77□□□□□ -2.53
RPL28P46779 AL603914.1-201ENST00000401964 204 ntBASIC-0.77□□□□□ -2.53
RPL28P46779 TRAJ51-201ENST00000504127 63 ntBASIC-0.77□□□□□ -2.53
RPL28P46779 AC074198.2-201ENST00000508153 258 ntBASIC-0.77□□□□□ -2.53
RPL28P46779 MIR3129-201ENST00000581095 76 ntBASIC-0.77□□□□□ -2.53
RPL28P46779 AC006006.1-201ENST00000603082 144 ntBASIC-0.77□□□□□ -2.53
RPL28P46779 AL606534.2-204ENST00000635008 178 ntBASIC-0.77□□□□□ -2.53
RPL28P46779 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.78□□□□□ -2.53
RPL28P46779 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms