Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 Y_RNA.464-201ENST00000384282 110 ntBASIC0.88□□□□□ -2.27
APOBEC1P41238 SNORD89-201ENST00000390981 114 ntBASIC0.88□□□□□ -2.27
APOBEC1P41238 AL603914.1-201ENST00000401964 204 ntBASIC0.88□□□□□ -2.27
APOBEC1P41238 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.88□□□□□ -2.27
APOBEC1P41238 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.88□□□□□ -2.27
APOBEC1P41238 RNA5SP255-201ENST00000516370 107 ntBASIC0.88□□□□□ -2.27
APOBEC1P41238 RNU6-113P-201ENST00000516653 101 ntBASIC0.88□□□□□ -2.27
APOBEC1P41238 SNORA25.9-201ENST00000365087 128 ntBASIC0.87□□□□□ -2.27
APOBEC1P41238 RNU6-690P-201ENST00000365242 106 ntBASIC0.87□□□□□ -2.27
APOBEC1P41238 Y_RNA.398-201ENST00000383952 99 ntBASIC0.87□□□□□ -2.27
APOBEC1P41238 MIR100-201ENST00000385259 80 ntBASIC0.87□□□□□ -2.27
APOBEC1P41238 RNU6-907P-201ENST00000390924 102 ntBASIC0.87□□□□□ -2.27
APOBEC1P41238 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.87□□□□□ -2.27
APOBEC1P41238 RNU6-1165P-201ENST00000410119 107 ntBASIC0.87□□□□□ -2.27
APOBEC1P41238 RNA5SP237-201ENST00000410414 113 ntBASIC0.87□□□□□ -2.27
APOBEC1P41238 RNA5SP247-201ENST00000411181 105 ntBASIC0.87□□□□□ -2.27
APOBEC1P41238 RPS26P5-201ENST00000418544 335 ntBASIC0.87□□□□□ -2.27
APOBEC1P41238 RNU2-60P-201ENST00000517290 128 ntBASIC0.87□□□□□ -2.27
APOBEC1P41238 AC025627.3-201ENST00000582078 182 ntBASIC0.87□□□□□ -2.27
APOBEC1P41238 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.87□□□□□ -2.27
APOBEC1P41238 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
APOBEC1P41238 AC010332.2-201ENST00000613083 1904 ntBASIC0.86□□□□□ -2.27
APOBEC1P41238 RNY1P11-201ENST00000363759 113 ntBASIC0.86□□□□□ -2.27
APOBEC1P41238 Y_RNA.400-201ENST00000383963 111 ntBASIC0.86□□□□□ -2.27
APOBEC1P41238 MIR1827-201ENST00000408549 66 ntBASIC0.86□□□□□ -2.27
APOBEC1P41238 SNORD83.1-201ENST00000411362 77 ntBASIC0.86□□□□□ -2.27
APOBEC1P41238 AL022718.1-201ENST00000412004 84 ntBASIC0.86□□□□□ -2.27
APOBEC1P41238 Y_RNA.690-201ENST00000516603 95 ntBASIC0.86□□□□□ -2.27
APOBEC1P41238 MIR548X2-201ENST00000579776 100 ntBASIC0.86□□□□□ -2.27
APOBEC1P41238 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.86□□□□□ -2.27
APOBEC1P41238 MIR563-201ENST00000385080 79 ntBASIC0.85□□□□□ -2.27
APOBEC1P41238 MT-TF-201ENST00000387314 71 ntBASIC0.85□□□□□ -2.27
APOBEC1P41238 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
APOBEC1P41238 RNA5SP144-201ENST00000410846 116 ntBASIC0.85□□□□□ -2.27
APOBEC1P41238 POLR2J4-204ENST00000418424 324 ntBASIC0.85□□□□□ -2.27
APOBEC1P41238 snoU13.21-201ENST00000459368 105 ntBASIC0.85□□□□□ -2.27
APOBEC1P41238 AC113410.1-201ENST00000505029 247 ntBASIC0.85□□□□□ -2.27
APOBEC1P41238 MIR4771-2-201ENST00000577758 74 ntBASIC0.85□□□□□ -2.27
APOBEC1P41238 Y_RNA.757-201ENST00000578934 114 ntBASIC0.85□□□□□ -2.27
APOBEC1P41238 MIR4771-1-201ENST00000582617 74 ntBASIC0.85□□□□□ -2.27
APOBEC1P41238 RNU6-309P-201ENST00000364573 106 ntBASIC0.84□□□□□ -2.27
APOBEC1P41238 RNU6-1237P-201ENST00000384777 107 ntBASIC0.84□□□□□ -2.27
APOBEC1P41238 MIR532-201ENST00000385025 91 ntBASIC0.84□□□□□ -2.27
APOBEC1P41238 RNU7-197P-201ENST00000458836 62 ntBASIC0.84□□□□□ -2.27
APOBEC1P41238 SNORA25.12-201ENST00000516202 82 ntBASIC0.84□□□□□ -2.27
APOBEC1P41238 RNU6-977P-201ENST00000516411 103 ntBASIC0.84□□□□□ -2.27
APOBEC1P41238 Y_RNA.686-201ENST00000516548 134 ntBASIC0.84□□□□□ -2.27
APOBEC1P41238 AC133485.4-201ENST00000561835 220 ntBASIC0.84□□□□□ -2.27
APOBEC1P41238 AC138907.4-201ENST00000570107 226 ntBASIC0.84□□□□□ -2.27
APOBEC1P41238 MIR6857-201ENST00000613267 93 ntBASIC0.84□□□□□ -2.27
APOBEC1P41238 AC021753.1-201ENST00000635724 168 ntBASIC0.84□□□□□ -2.27
APOBEC1P41238 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
APOBEC1P41238 Y_RNA.215-201ENST00000364204 112 ntBASIC0.83□□□□□ -2.28
APOBEC1P41238 RNU6-460P-201ENST00000391158 108 ntBASIC0.83□□□□□ -2.28
APOBEC1P41238 RPL39P25-201ENST00000449384 154 ntBASIC0.83□□□□□ -2.28
APOBEC1P41238 RNU7-113P-201ENST00000459273 62 ntBASIC0.83□□□□□ -2.28
APOBEC1P41238 RNU6-240P-201ENST00000516098 97 ntBASIC0.83□□□□□ -2.28
APOBEC1P41238 RNU6-1212P-201ENST00000517023 104 ntBASIC0.83□□□□□ -2.28
APOBEC1P41238 MIR4305-201ENST00000583252 102 ntBASIC0.83□□□□□ -2.28
APOBEC1P41238 uc_338.6-201ENST00000613544 171 ntBASIC0.83□□□□□ -2.28
APOBEC1P41238 MIR8070-201ENST00000616510 88 ntBASIC0.83□□□□□ -2.28
APOBEC1P41238 AL662814.1-201ENST00000617364 121 ntBASIC0.83□□□□□ -2.28
APOBEC1P41238 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.83□□□□□ -2.28
APOBEC1P41238 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.82□□□□□ -2.28
APOBEC1P41238 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
APOBEC1P41238 MIR30D-201ENST00000362283 70 ntBASIC0.82□□□□□ -2.28
APOBEC1P41238 RNU6-1187P-201ENST00000364771 110 ntBASIC0.82□□□□□ -2.28
APOBEC1P41238 RNU1-36P-201ENST00000365130 165 ntBASIC0.82□□□□□ -2.28
APOBEC1P41238 MIR499A-201ENST00000384903 122 ntBASIC0.82□□□□□ -2.28
APOBEC1P41238 MIR1287-201ENST00000408492 90 ntBASIC0.82□□□□□ -2.28
APOBEC1P41238 Y_RNA.651-201ENST00000459380 103 ntBASIC0.82□□□□□ -2.28
APOBEC1P41238 RNU5E-3P-201ENST00000515913 68 ntBASIC0.82□□□□□ -2.28
APOBEC1P41238 Y_RNA.692-201ENST00000516627 105 ntBASIC0.82□□□□□ -2.28
APOBEC1P41238 MTND5P41-201ENST00000517498 206 ntBASIC0.82□□□□□ -2.28
APOBEC1P41238 AC021443.1-201ENST00000604478 211 ntBASIC0.82□□□□□ -2.28
APOBEC1P41238 AC023934.1-201ENST00000574529 2389 ntBASIC0.81□□□□□ -2.28
APOBEC1P41238 Y_RNA.171-201ENST00000363760 102 ntBASIC0.81□□□□□ -2.28
APOBEC1P41238 RNU6-915P-201ENST00000364943 103 ntBASIC0.81□□□□□ -2.28
APOBEC1P41238 RNU6-209P-201ENST00000384118 107 ntBASIC0.81□□□□□ -2.28
APOBEC1P41238 Y_RNA.488-201ENST00000384403 102 ntBASIC0.81□□□□□ -2.28
APOBEC1P41238 SNORA18-201ENST00000384416 132 ntBASIC0.81□□□□□ -2.28
APOBEC1P41238 SNORD105-201ENST00000386910 85 ntBASIC0.81□□□□□ -2.28
APOBEC1P41238 MIR1257-201ENST00000408490 117 ntBASIC0.81□□□□□ -2.28
APOBEC1P41238 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.81□□□□□ -2.28
APOBEC1P41238 RNU7-185P-201ENST00000459215 60 ntBASIC0.81□□□□□ -2.28
APOBEC1P41238 RNU6-1258P-201ENST00000516911 111 ntBASIC0.81□□□□□ -2.28
APOBEC1P41238 MIR4676-201ENST00000583078 72 ntBASIC0.81□□□□□ -2.28
APOBEC1P41238 SNORA4-201ENST00000584302 138 ntBASIC0.81□□□□□ -2.28
APOBEC1P41238 AP001340.1-201ENST00000624405 217 ntBASIC0.81□□□□□ -2.28
APOBEC1P41238 RNU6-369P-201ENST00000362515 102 ntBASIC0.8□□□□□ -2.28
APOBEC1P41238 SNORD115-2-201ENST00000362842 82 ntBASIC0.8□□□□□ -2.28
APOBEC1P41238 Y_RNA.170-201ENST00000363746 110 ntBASIC0.8□□□□□ -2.28
APOBEC1P41238 Y_RNA.226-201ENST00000364337 114 ntBASIC0.8□□□□□ -2.28
APOBEC1P41238 SNORD115-20-201ENST00000365099 82 ntBASIC0.8□□□□□ -2.28
APOBEC1P41238 MIR520F-201ENST00000384824 87 ntBASIC0.8□□□□□ -2.28
APOBEC1P41238 AC015818.7-201ENST00000428754 109 ntBASIC0.8□□□□□ -2.28
APOBEC1P41238 AC087499.7-201ENST00000441958 109 ntBASIC0.8□□□□□ -2.28
APOBEC1P41238 RPL39P28-201ENST00000465655 155 ntBASIC0.8□□□□□ -2.28
APOBEC1P41238 RNA5SP33-201ENST00000516687 98 ntBASIC0.8□□□□□ -2.28
APOBEC1P41238 AP001328.1-201ENST00000528550 176 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 501.7 ms