Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
HOXD11P31277 MIR627-201ENST00000384979 97 ntBASIC4.08□□□□□ -1.76
HOXD11P31277 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.08□□□□□ -1.76
HOXD11P31277 AC100770.1-201ENST00000532310 322 ntBASIC4.08□□□□□ -1.76
HOXD11P31277 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.08□□□□□ -1.76
HOXD11P31277 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.08□□□□□ -1.76
HOXD11P31277 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HOXD11P31277 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXD11P31277 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXD11P31277 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXD11P31277 MIR125B2-201ENST00000385128 89 ntBASIC4.07□□□□□ -1.76
HOXD11P31277 SNORD83.1-201ENST00000411362 77 ntBASIC4.07□□□□□ -1.76
HOXD11P31277 AC067940.1-201ENST00000458411 300 ntBASIC4.07□□□□□ -1.76
HOXD11P31277 S100A11P2-201ENST00000467589 312 ntBASIC4.07□□□□□ -1.76
HOXD11P31277 RN7SL20P-201ENST00000488827 297 ntBASIC4.07□□□□□ -1.76
HOXD11P31277 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HOXD11P31277 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXD11P31277 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HOXD11P31277 RNA5SP383-201ENST00000362934 120 ntBASIC4.06□□□□□ -1.76
HOXD11P31277 RNA5SP264-201ENST00000363115 107 ntBASIC4.06□□□□□ -1.76
HOXD11P31277 SNORA54-201ENST00000384281 123 ntBASIC4.06□□□□□ -1.76
HOXD11P31277 snoU13.25-201ENST00000458945 104 ntBASIC4.06□□□□□ -1.76
HOXD11P31277 AC021146.9-201ENST00000512503 156 ntBASIC4.06□□□□□ -1.76
HOXD11P31277 RNA5SP164-201ENST00000516533 110 ntBASIC4.06□□□□□ -1.76
HOXD11P31277 AP003716.2-201ENST00000528260 108 ntBASIC4.06□□□□□ -1.76
HOXD11P31277 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC4.06□□□□□ -1.76
HOXD11P31277 MIR7151-201ENST00000617477 60 ntBASIC4.06□□□□□ -1.76
HOXD11P31277 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HOXD11P31277 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXD11P31277 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXD11P31277 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
HOXD11P31277 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HOXD11P31277 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXD11P31277 RNA5SP175-201ENST00000364275 119 ntBASIC4.05□□□□□ -1.76
HOXD11P31277 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
HOXD11P31277 snoU13.21-201ENST00000459368 105 ntBASIC4.05□□□□□ -1.76
HOXD11P31277 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.05□□□□□ -1.76
HOXD11P31277 MIR3186-201ENST00000577404 85 ntBASIC4.05□□□□□ -1.76
HOXD11P31277 MIR548AG2-201ENST00000581228 64 ntBASIC4.05□□□□□ -1.76
HOXD11P31277 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXD11P31277 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXD11P31277 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HOXD11P31277 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
HOXD11P31277 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXD11P31277 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD11P31277 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
HOXD11P31277 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD11P31277 SNORA5B-201ENST00000363786 132 ntBASIC4.04□□□□□ -1.76
HOXD11P31277 AL513328.1-201ENST00000446460 224 ntBASIC4.04□□□□□ -1.76
HOXD11P31277 SNORD42B-201ENST00000458893 67 ntBASIC4.04□□□□□ -1.76
HOXD11P31277 RN7SL330P-201ENST00000469709 307 ntBASIC4.04□□□□□ -1.76
HOXD11P31277 RNA5SP446-201ENST00000515955 82 ntBASIC4.04□□□□□ -1.76
HOXD11P31277 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXD11P31277 AC027290.2-201ENST00000623210 18662 ntBASIC4.03□□□□□ -1.76
HOXD11P31277 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXD11P31277 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HOXD11P31277 MIR617-201ENST00000385030 97 ntBASIC4.03□□□□□ -1.76
HOXD11P31277 SNORA3.3-201ENST00000408712 125 ntBASIC4.03□□□□□ -1.76
HOXD11P31277 RNU6ATAC14P-201ENST00000516218 91 ntBASIC4.03□□□□□ -1.76
HOXD11P31277 AC018659.1-201ENST00000551083 169 ntBASIC4.03□□□□□ -1.76
HOXD11P31277 AL645939.4-201ENST00000604495 135 ntBASIC4.03□□□□□ -1.76
HOXD11P31277 AC091167.4-201ENST00000605079 184 ntBASIC4.03□□□□□ -1.76
HOXD11P31277 XIST_intron.1-201ENST00000619444 68 ntBASIC4.03□□□□□ -1.76
HOXD11P31277 U8.2-201ENST00000363156 134 ntBASIC4.02□□□□□ -1.77
HOXD11P31277 RNU6-990P-201ENST00000364385 104 ntBASIC4.02□□□□□ -1.77
HOXD11P31277 Y_RNA.250-201ENST00000364542 110 ntBASIC4.02□□□□□ -1.77
HOXD11P31277 RNU6-934P-201ENST00000365154 107 ntBASIC4.02□□□□□ -1.77
HOXD11P31277 RNU1-89P-201ENST00000384592 164 ntBASIC4.02□□□□□ -1.77
HOXD11P31277 HLA-N-201ENST00000437516 135 ntBASIC4.02□□□□□ -1.77
HOXD11P31277 RNU6-231P-201ENST00000517122 103 ntBASIC4.02□□□□□ -1.77
HOXD11P31277 U7.8-201ENST00000619968 63 ntBASIC4.02□□□□□ -1.77
HOXD11P31277 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXD11P31277 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
HOXD11P31277 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD11P31277 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD11P31277 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD11P31277 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
HOXD11P31277 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD11P31277 RN7SL442P-201ENST00000473804 320 ntBASIC4.01□□□□□ -1.77
HOXD11P31277 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD11P31277 MIR7106-201ENST00000612419 65 ntBASIC4.01□□□□□ -1.77
HOXD11P31277 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXD11P31277 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD11P31277 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD11P31277 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
HOXD11P31277 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD11P31277 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4□□□□□ -1.77
HOXD11P31277 RNU6V-201ENST00000384105 107 ntBASIC4□□□□□ -1.77
HOXD11P31277 AL137849.1-201ENST00000604767 169 ntBASIC4□□□□□ -1.77
HOXD11P31277 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
HOXD11P31277 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
HOXD11P31277 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HOXD11P31277 MIR521-2-201ENST00000384818 87 ntBASIC3.99□□□□□ -1.77
HOXD11P31277 RNA5SP306-201ENST00000411087 107 ntBASIC3.99□□□□□ -1.77
HOXD11P31277 AC092427.1-202ENST00000430569 476 ntBASIC3.99□□□□□ -1.77
HOXD11P31277 RNU7-174P-201ENST00000516248 59 ntBASIC3.99□□□□□ -1.77
HOXD11P31277 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.99□□□□□ -1.77
HOXD11P31277 MIR4771-2-201ENST00000577758 74 ntBASIC3.99□□□□□ -1.77
HOXD11P31277 MIR4771-1-201ENST00000582617 74 ntBASIC3.99□□□□□ -1.77
HOXD11P31277 AC091178.1-203ENST00000584586 279 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms