Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 RNY1P13-201ENST00000365030 105 ntBASIC-0.27□□□□□ -2.45
SLC6A1P30531 MIR626-201ENST00000385032 94 ntBASIC-0.27□□□□□ -2.45
SLC6A1P30531 MT-TT-201ENST00000387460 66 ntBASIC-0.27□□□□□ -2.45
SLC6A1P30531 MIR501-201ENST00000390204 84 ntBASIC-0.27□□□□□ -2.45
SLC6A1P30531 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.27□□□□□ -2.45
SLC6A1P30531 SNORA53-201ENST00000391141 249 ntBASIC-0.27□□□□□ -2.45
SLC6A1P30531 MIR892B-201ENST00000401279 77 ntBASIC-0.27□□□□□ -2.45
SLC6A1P30531 MTND4P19-201ENST00000446659 478 ntBASIC-0.27□□□□□ -2.45
SLC6A1P30531 RNU7-159P-201ENST00000459284 62 ntBASIC-0.27□□□□□ -2.45
SLC6A1P30531 RNU7-80P-201ENST00000459562 61 ntBASIC-0.27□□□□□ -2.45
SLC6A1P30531 AC138869.1-201ENST00000568623 124 ntBASIC-0.27□□□□□ -2.45
SLC6A1P30531 SNORA22.1-201ENST00000362701 134 ntBASIC-0.28□□□□□ -2.45
SLC6A1P30531 RNU6-161P-201ENST00000363051 106 ntBASIC-0.28□□□□□ -2.45
SLC6A1P30531 RNU4-73P-201ENST00000363164 141 ntBASIC-0.28□□□□□ -2.45
SLC6A1P30531 SNORA63.5-201ENST00000363548 123 ntBASIC-0.28□□□□□ -2.45
SLC6A1P30531 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.28□□□□□ -2.45
SLC6A1P30531 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.28□□□□□ -2.45
SLC6A1P30531 RNU6-211P-201ENST00000384047 107 ntBASIC-0.28□□□□□ -2.45
SLC6A1P30531 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.28□□□□□ -2.45
SLC6A1P30531 SNORA18-201ENST00000384416 132 ntBASIC-0.28□□□□□ -2.45
SLC6A1P30531 SNORA20-201ENST00000384662 132 ntBASIC-0.28□□□□□ -2.45
SLC6A1P30531 RNU6-823P-201ENST00000391042 103 ntBASIC-0.28□□□□□ -2.45
SLC6A1P30531 SNRPGP8-201ENST00000454064 226 ntBASIC-0.28□□□□□ -2.45
SLC6A1P30531 RNA5SP395-201ENST00000516567 118 ntBASIC-0.28□□□□□ -2.45
SLC6A1P30531 AP003072.1-201ENST00000531740 145 ntBASIC-0.28□□□□□ -2.45
SLC6A1P30531 MIR3129-201ENST00000581095 76 ntBASIC-0.28□□□□□ -2.45
SLC6A1P30531 AC037487.3-201ENST00000606668 112 ntBASIC-0.28□□□□□ -2.45
SLC6A1P30531 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.29□□□□□ -2.46
SLC6A1P30531 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.29□□□□□ -2.46
SLC6A1P30531 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.29□□□□□ -2.46
SLC6A1P30531 MIR214-201ENST00000385214 110 ntBASIC-0.29□□□□□ -2.46
SLC6A1P30531 RNU6-269P-201ENST00000391077 97 ntBASIC-0.29□□□□□ -2.46
SLC6A1P30531 RPL21P38-201ENST00000418090 167 ntBASIC-0.29□□□□□ -2.46
SLC6A1P30531 AC108059.2-201ENST00000434626 151 ntBASIC-0.29□□□□□ -2.46
SLC6A1P30531 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.29□□□□□ -2.46
SLC6A1P30531 AC021613.1-201ENST00000623880 111 ntBASIC-0.29□□□□□ -2.46
SLC6A1P30531 UBE2WP1-201ENST00000362030 340 ntBASIC-0.3□□□□□ -2.46
SLC6A1P30531 RNY3P5-201ENST00000384127 102 ntBASIC-0.3□□□□□ -2.46
SLC6A1P30531 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.3□□□□□ -2.46
SLC6A1P30531 MIR1252-201ENST00000408861 65 ntBASIC-0.3□□□□□ -2.46
SLC6A1P30531 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.3□□□□□ -2.46
SLC6A1P30531 RNU7-165P-201ENST00000458864 60 ntBASIC-0.3□□□□□ -2.46
SLC6A1P30531 RNU6-875P-201ENST00000516488 106 ntBASIC-0.3□□□□□ -2.46
SLC6A1P30531 RNU6-531P-201ENST00000516694 104 ntBASIC-0.3□□□□□ -2.46
SLC6A1P30531 SNORA70.25-201ENST00000612741 95 ntBASIC-0.3□□□□□ -2.46
SLC6A1P30531 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.31□□□□□ -2.46
SLC6A1P30531 SNORD114-31-201ENST00000363219 75 ntBASIC-0.31□□□□□ -2.46
SLC6A1P30531 RNU6-726P-201ENST00000364680 107 ntBASIC-0.31□□□□□ -2.46
SLC6A1P30531 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.31□□□□□ -2.46
SLC6A1P30531 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.31□□□□□ -2.46
SLC6A1P30531 RNA5SP163-201ENST00000410304 99 ntBASIC-0.31□□□□□ -2.46
SLC6A1P30531 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.31□□□□□ -2.46
SLC6A1P30531 AL442067.1-201ENST00000613261 223 ntBASIC-0.31□□□□□ -2.46
SLC6A1P30531 MIR1295B-201ENST00000636144 60 ntBASIC-0.31□□□□□ -2.46
SLC6A1P30531 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.32□□□□□ -2.46
SLC6A1P30531 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.32□□□□□ -2.46
SLC6A1P30531 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.32□□□□□ -2.46
SLC6A1P30531 RNU6-652P-201ENST00000365488 107 ntBASIC-0.32□□□□□ -2.46
SLC6A1P30531 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.32□□□□□ -2.46
SLC6A1P30531 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
SLC6A1P30531 AL606845.1-201ENST00000404881 255 ntBASIC-0.32□□□□□ -2.46
SLC6A1P30531 MIR1912-201ENST00000410389 80 ntBASIC-0.32□□□□□ -2.46
SLC6A1P30531 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.32□□□□□ -2.46
SLC6A1P30531 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.32□□□□□ -2.46
SLC6A1P30531 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.32□□□□□ -2.46
SLC6A1P30531 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.32□□□□□ -2.46
SLC6A1P30531 AC104692.1-201ENST00000472406 90 ntBASIC-0.32□□□□□ -2.46
SLC6A1P30531 RNU6-453P-201ENST00000516819 85 ntBASIC-0.32□□□□□ -2.46
SLC6A1P30531 DEFB131E-201ENST00000532329 154 ntBASIC-0.32□□□□□ -2.46
SLC6A1P30531 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.32□□□□□ -2.46
SLC6A1P30531 MIR548AD-201ENST00000584780 82 ntBASIC-0.32□□□□□ -2.46
SLC6A1P30531 AL162376.1-201ENST00000624117 175 ntBASIC-0.32□□□□□ -2.46
SLC6A1P30531 RNA5SP98-201ENST00000363158 137 ntBASIC-0.33□□□□□ -2.46
SLC6A1P30531 SNORD115-24-201ENST00000363528 82 ntBASIC-0.33□□□□□ -2.46
SLC6A1P30531 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.33□□□□□ -2.46
SLC6A1P30531 RNU6-806P-201ENST00000365147 105 ntBASIC-0.33□□□□□ -2.46
SLC6A1P30531 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.33□□□□□ -2.46
SLC6A1P30531 ELOCP20-201ENST00000422460 345 ntBASIC-0.33□□□□□ -2.46
SLC6A1P30531 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.33□□□□□ -2.46
SLC6A1P30531 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.33□□□□□ -2.46
SLC6A1P30531 SNORA40.15-201ENST00000516884 107 ntBASIC-0.33□□□□□ -2.46
SLC6A1P30531 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.33□□□□□ -2.46
SLC6A1P30531 MIR4645-201ENST00000583158 77 ntBASIC-0.33□□□□□ -2.46
SLC6A1P30531 AL365205.2-201ENST00000594586 68 ntBASIC-0.33□□□□□ -2.46
SLC6A1P30531 MTND5P32-201ENST00000560711 1802 ntBASIC-0.34□□□□□ -2.46
SLC6A1P30531 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.34□□□□□ -2.46
SLC6A1P30531 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.34□□□□□ -2.46
SLC6A1P30531 RNU4-58P-201ENST00000363192 141 ntBASIC-0.34□□□□□ -2.46
SLC6A1P30531 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.34□□□□□ -2.46
SLC6A1P30531 RNA5SP133-201ENST00000363368 119 ntBASIC-0.34□□□□□ -2.46
SLC6A1P30531 RNU4-16P-201ENST00000364737 141 ntBASIC-0.34□□□□□ -2.46
SLC6A1P30531 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.34□□□□□ -2.46
SLC6A1P30531 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.34□□□□□ -2.46
SLC6A1P30531 MIR5589-201ENST00000579442 60 ntBASIC-0.34□□□□□ -2.46
SLC6A1P30531 AC090971.5-201ENST00000621102 293 ntBASIC-0.34□□□□□ -2.46
SLC6A1P30531 MIR369-201ENST00000362155 70 ntBASIC-0.35□□□□□ -2.47
SLC6A1P30531 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.35□□□□□ -2.47
SLC6A1P30531 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.35□□□□□ -2.47
SLC6A1P30531 RNU6-702P-201ENST00000364982 107 ntBASIC-0.35□□□□□ -2.47
SLC6A1P30531 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms