Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RNU6-1057P-201ENST00000517162 102 ntBASIC-4.21□□□□□ -3.08
TOP2AP11388 SNORA22.1-201ENST00000362701 134 ntBASIC-4.22□□□□□ -3.09
TOP2AP11388 RNU6-1267P-201ENST00000410747 107 ntBASIC-4.22□□□□□ -3.09
TOP2AP11388 Y_RNA.633-201ENST00000459107 95 ntBASIC-4.22□□□□□ -3.09
TOP2AP11388 RNU6-559P-201ENST00000516151 98 ntBASIC-4.22□□□□□ -3.09
TOP2AP11388 AL445984.1-201ENST00000637834 659 ntBASIC-4.22□□□□□ -3.09
TOP2AP11388 RNU6-61P-201ENST00000365528 109 ntBASIC-4.23□□□□□ -3.09
TOP2AP11388 Y_RNA.512-201ENST00000384518 102 ntBASIC-4.23□□□□□ -3.09
TOP2AP11388 RNU6-192P-201ENST00000391253 100 ntBASIC-4.23□□□□□ -3.09
TOP2AP11388 USP9YP23-201ENST00000455085 407 ntBASIC-4.23□□□□□ -3.09
TOP2AP11388 CYP3A54P-201ENST00000566950 75 ntBASIC-4.23□□□□□ -3.09
TOP2AP11388 RNU4-80P-201ENST00000363200 141 ntBASIC-4.24□□□□□ -3.09
TOP2AP11388 RNU5B-1-201ENST00000363286 116 ntBASIC-4.24□□□□□ -3.09
TOP2AP11388 SNORD114-10-201ENST00000363409 72 ntBASIC-4.24□□□□□ -3.09
TOP2AP11388 SNORA20-201ENST00000384662 132 ntBASIC-4.24□□□□□ -3.09
TOP2AP11388 SNORD73A-201ENST00000386062 65 ntBASIC-4.24□□□□□ -3.09
TOP2AP11388 SNORA53-201ENST00000391141 249 ntBASIC-4.24□□□□□ -3.09
TOP2AP11388 ACA59.1-201ENST00000515966 143 ntBASIC-4.24□□□□□ -3.09
TOP2AP11388 Y_RNA.683-201ENST00000516508 93 ntBASIC-4.24□□□□□ -3.09
TOP2AP11388 RNU7-137P-201ENST00000516788 62 ntBASIC-4.24□□□□□ -3.09
TOP2AP11388 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-4.24□□□□□ -3.09
TOP2AP11388 AC245884.10-201ENST00000597355 337 ntBASIC-4.24□□□□□ -3.09
TOP2AP11388 AC092807.2-201ENST00000609367 243 ntBASIC-4.24□□□□□ -3.09
TOP2AP11388 AC122108.2-201ENST00000611946 526 ntBASIC-4.24□□□□□ -3.09
TOP2AP11388 U6.100-201ENST00000636230 99 ntBASIC-4.24□□□□□ -3.09
TOP2AP11388 MIR6841-201ENST00000637129 72 ntBASIC-4.24□□□□□ -3.09
TOP2AP11388 Y_RNA.527-201ENST00000384573 102 ntBASIC-4.25□□□□□ -3.09
TOP2AP11388 AC114982.2-201ENST00000461396 358 ntBASIC-4.26□□□□□ -3.09
TOP2AP11388 MIR2681-201ENST00000581814 105 ntBASIC-4.26□□□□□ -3.09
TOP2AP11388 Y_RNA.830-201ENST00000628531 96 ntBASIC-4.26□□□□□ -3.09
TOP2AP11388 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-4.26□□□□□ -3.09
TOP2AP11388 Y_RNA.420-201ENST00000384043 110 ntBASIC-4.26□□□□□ -3.09
TOP2AP11388 AC107399.1-201ENST00000451226 265 ntBASIC-4.26□□□□□ -3.09
TOP2AP11388 SNORD67.1-201ENST00000516618 108 ntBASIC-4.26□□□□□ -3.09
TOP2AP11388 MIR410-201ENST00000362222 80 ntBASIC-4.27□□□□□ -3.09
TOP2AP11388 RNU6-282P-201ENST00000365357 103 ntBASIC-4.27□□□□□ -3.09
TOP2AP11388 MIR513C-201ENST00000401352 84 ntBASIC-4.27□□□□□ -3.09
TOP2AP11388 RNU6-1287P-201ENST00000362914 107 ntBASIC-4.28□□□□□ -3.09
TOP2AP11388 SNORD115-7-201ENST00000365306 82 ntBASIC-4.28□□□□□ -3.09
TOP2AP11388 Y_RNA.351-201ENST00000365436 96 ntBASIC-4.28□□□□□ -3.09
TOP2AP11388 RNU6-874P-201ENST00000362390 105 ntBASIC-4.29□□□□□ -3.1
TOP2AP11388 Y_RNA.27-201ENST00000362540 103 ntBASIC-4.29□□□□□ -3.1
TOP2AP11388 RNU6-715P-201ENST00000365204 103 ntBASIC-4.29□□□□□ -3.1
TOP2AP11388 RNU6-387P-201ENST00000411331 105 ntBASIC-4.29□□□□□ -3.1
TOP2AP11388 AC026741.1-201ENST00000605892 482 ntBASIC-4.29□□□□□ -3.1
TOP2AP11388 TRDV1-202ENST00000621643 102 ntBASIC-4.29□□□□□ -3.1
TOP2AP11388 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-4.29□□□□□ -3.1
TOP2AP11388 RNU6-550P-201ENST00000391057 101 ntBASIC-4.3□□□□□ -3.1
TOP2AP11388 TIMM9P2-201ENST00000419324 266 ntBASIC-4.3□□□□□ -3.1
TOP2AP11388 RNU6-1174P-201ENST00000517278 101 ntBASIC-4.3□□□□□ -3.1
TOP2AP11388 AL512360.1-201ENST00000555346 234 ntBASIC-4.3□□□□□ -3.1
TOP2AP11388 Y_RNA.233-201ENST00000364407 101 ntBASIC-4.31□□□□□ -3.1
TOP2AP11388 MIR516A2-201ENST00000384888 90 ntBASIC-4.31□□□□□ -3.1
TOP2AP11388 MIR516A1-201ENST00000385033 90 ntBASIC-4.31□□□□□ -3.1
TOP2AP11388 HSPE1P25-201ENST00000455484 251 ntBASIC-4.31□□□□□ -3.1
TOP2AP11388 MIR5693-201ENST00000577722 73 ntBASIC-4.31□□□□□ -3.1
TOP2AP11388 RNU6-978P-201ENST00000364371 103 ntBASIC-4.31□□□□□ -3.1
TOP2AP11388 Y_RNA.344-201ENST00000365381 112 ntBASIC-4.31□□□□□ -3.1
TOP2AP11388 AC009961.2-201ENST00000435771 251 ntBASIC-4.31□□□□□ -3.1
TOP2AP11388 RNU6-693P-201ENST00000516134 107 ntBASIC-4.31□□□□□ -3.1
TOP2AP11388 RNU6-861P-201ENST00000516745 106 ntBASIC-4.31□□□□□ -3.1
TOP2AP11388 RNU7-116P-201ENST00000516940 62 ntBASIC-4.31□□□□□ -3.1
TOP2AP11388 AC002044.1-201ENST00000606707 158 ntBASIC-4.31□□□□□ -3.1
TOP2AP11388 SNORD56.2-201ENST00000363242 71 ntBASIC-4.32□□□□□ -3.1
TOP2AP11388 Y_RNA.199-201ENST00000364014 102 ntBASIC-4.32□□□□□ -3.1
TOP2AP11388 SNORD115-32-201ENST00000364079 82 ntBASIC-4.32□□□□□ -3.1
TOP2AP11388 RNU6-20P-201ENST00000384106 107 ntBASIC-4.32□□□□□ -3.1
TOP2AP11388 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-4.32□□□□□ -3.1
TOP2AP11388 RNU6-694P-201ENST00000364071 147 ntBASIC-4.33□□□□□ -3.1
TOP2AP11388 Y_RNA.587-201ENST00000391210 103 ntBASIC-4.33□□□□□ -3.1
TOP2AP11388 RNU7-154P-201ENST00000516194 62 ntBASIC-4.33□□□□□ -3.1
TOP2AP11388 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-4.33□□□□□ -3.1
TOP2AP11388 Y_RNA.463-201ENST00000384271 102 ntBASIC-4.34□□□□□ -3.1
TOP2AP11388 AC123904.2-201ENST00000548059 300 ntBASIC-4.34□□□□□ -3.1
TOP2AP11388 AP000720.1-201ENST00000625091 483 ntBASIC-4.34□□□□□ -3.1
TOP2AP11388 Y_RNA.576-201ENST00000384781 102 ntBASIC-4.35□□□□□ -3.11
TOP2AP11388 MIR1278-201ENST00000408753 81 ntBASIC-4.35□□□□□ -3.11
TOP2AP11388 RNU2-66P-201ENST00000410650 161 ntBASIC-4.35□□□□□ -3.11
TOP2AP11388 RNU6-1052P-201ENST00000411398 104 ntBASIC-4.35□□□□□ -3.11
TOP2AP11388 RNU6-719P-201ENST00000516671 104 ntBASIC-4.35□□□□□ -3.11
TOP2AP11388 RNU6-85P-201ENST00000605989 107 ntBASIC-4.35□□□□□ -3.11
TOP2AP11388 RNU6-824P-201ENST00000363724 104 ntBASIC-4.36□□□□□ -3.11
TOP2AP11388 RNU6-1014P-201ENST00000383940 103 ntBASIC-4.36□□□□□ -3.11
TOP2AP11388 SNORA19.1-201ENST00000410656 129 ntBASIC-4.36□□□□□ -3.11
TOP2AP11388 AL161932.1-201ENST00000437408 146 ntBASIC-4.36□□□□□ -3.11
TOP2AP11388 MTND2P31-201ENST00000512602 616 ntBASIC-4.36□□□□□ -3.11
TOP2AP11388 RNU6-1225P-201ENST00000516336 65 ntBASIC-4.36□□□□□ -3.11
TOP2AP11388 RNU2-31P-201ENST00000516954 155 ntBASIC-4.36□□□□□ -3.11
TOP2AP11388 AC073534.2-201ENST00000620377 381 ntBASIC-4.36□□□□□ -3.11
TOP2AP11388 AC019226.2-201ENST00000625973 424 ntBASIC-4.36□□□□□ -3.11
TOP2AP11388 Y_RNA.51-201ENST00000362725 102 ntBASIC-4.36□□□□□ -3.11
TOP2AP11388 RNU6-132P-201ENST00000383863 107 ntBASIC-4.36□□□□□ -3.11
TOP2AP11388 MIR519A2-201ENST00000384990 87 ntBASIC-4.36□□□□□ -3.11
TOP2AP11388 MIR509-1-201ENST00000385265 94 ntBASIC-4.36□□□□□ -3.11
TOP2AP11388 MIR509-2-201ENST00000390724 91 ntBASIC-4.36□□□□□ -3.11
TOP2AP11388 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-4.36□□□□□ -3.11
TOP2AP11388 RNU6-630P-201ENST00000391258 106 ntBASIC-4.37□□□□□ -3.11
TOP2AP11388 CHEK2P4-201ENST00000450340 246 ntBASIC-4.37□□□□□ -3.11
TOP2AP11388 RNU6-893P-201ENST00000458841 100 ntBASIC-4.37□□□□□ -3.11
TOP2AP11388 Y_RNA.677-201ENST00000516401 85 ntBASIC-4.37□□□□□ -3.11
Retrieved 100 of 98,524 protein–RNA pairs in 249.3 ms