Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 MIR6755-201ENST00000619993 66 ntBASIC0.03□□□□□ -2.4
CAPN1P07384 MIR6841-201ENST00000637129 72 ntBASIC0.03□□□□□ -2.4
CAPN1P07384 Y_RNA.138-201ENST00000363462 102 ntBASIC0.02□□□□□ -2.41
CAPN1P07384 Y_RNA.153-201ENST00000363615 91 ntBASIC0.02□□□□□ -2.41
CAPN1P07384 Y_RNA.542-201ENST00000384641 111 ntBASIC0.02□□□□□ -2.41
CAPN1P07384 RNU6-651P-201ENST00000411040 105 ntBASIC0.02□□□□□ -2.41
CAPN1P07384 SUMO1P3-201ENST00000439961 304 ntBASIC0.02□□□□□ -2.41
CAPN1P07384 RNU7-80P-201ENST00000459562 61 ntBASIC0.02□□□□□ -2.41
CAPN1P07384 RNU6-765P-201ENST00000516916 99 ntBASIC0.02□□□□□ -2.41
CAPN1P07384 MIR4768-201ENST00000585270 74 ntBASIC0.02□□□□□ -2.41
CAPN1P07384 AC134503.1-201ENST00000633048 54 ntBASIC0.02□□□□□ -2.41
CAPN1P07384 AL596211.1-201ENST00000569873 2277 ntBASIC0.02□□□□□ -2.41
CAPN1P07384 Y_RNA.44-201ENST00000362676 108 ntBASIC0.01□□□□□ -2.41
CAPN1P07384 Y_RNA.128-201ENST00000363391 112 ntBASIC0.01□□□□□ -2.41
CAPN1P07384 Y_RNA.199-201ENST00000364014 102 ntBASIC0.01□□□□□ -2.41
CAPN1P07384 Y_RNA.216-201ENST00000364205 93 ntBASIC0.01□□□□□ -2.41
CAPN1P07384 MIR548P-201ENST00000408336 84 ntBASIC0.01□□□□□ -2.41
CAPN1P07384 MTATP6P23-201ENST00000440153 476 ntBASIC0.01□□□□□ -2.41
CAPN1P07384 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.01□□□□□ -2.41
CAPN1P07384 MIR4491-201ENST00000581087 68 ntBASIC0.01□□□□□ -2.41
CAPN1P07384 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.01□□□□□ -2.41
CAPN1P07384 MIR6828-201ENST00000636181 60 ntBASIC0.01□□□□□ -2.41
CAPN1P07384 Y_RNA.174-201ENST00000363781 105 ntBASIC0□□□□□ -2.41
CAPN1P07384 SNORD114-9-201ENST00000364370 72 ntBASIC0□□□□□ -2.41
CAPN1P07384 Y_RNA.454-201ENST00000384224 113 ntBASIC0□□□□□ -2.41
CAPN1P07384 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0□□□□□ -2.41
CAPN1P07384 SEPT7P4-201ENST00000437076 306 ntBASIC0□□□□□ -2.41
CAPN1P07384 Y_RNA.660-201ENST00000516002 120 ntBASIC0□□□□□ -2.41
CAPN1P07384 RNU6-561P-201ENST00000516222 102 ntBASIC0□□□□□ -2.41
CAPN1P07384 SCARNA16.5-201ENST00000517114 183 ntBASIC0□□□□□ -2.41
CAPN1P07384 AL365205.2-201ENST00000594586 68 ntBASIC0□□□□□ -2.41
CAPN1P07384 MIR371B-201ENST00000638082 66 ntBASIC0□□□□□ -2.41
CAPN1P07384 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
CAPN1P07384 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
CAPN1P07384 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.01□□□□□ -2.41
CAPN1P07384 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.01□□□□□ -2.41
CAPN1P07384 RNA5SP214-201ENST00000363378 118 ntBASIC-0.01□□□□□ -2.41
CAPN1P07384 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.01□□□□□ -2.41
CAPN1P07384 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.01□□□□□ -2.41
CAPN1P07384 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.01□□□□□ -2.41
CAPN1P07384 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.01□□□□□ -2.41
CAPN1P07384 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.01□□□□□ -2.41
CAPN1P07384 RNU6-949P-201ENST00000384040 107 ntBASIC-0.01□□□□□ -2.41
CAPN1P07384 RNU6-187P-201ENST00000384139 106 ntBASIC-0.01□□□□□ -2.41
CAPN1P07384 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.01□□□□□ -2.41
CAPN1P07384 SNORA72.6-201ENST00000384520 129 ntBASIC-0.01□□□□□ -2.41
CAPN1P07384 RNU6-291P-201ENST00000384720 107 ntBASIC-0.01□□□□□ -2.41
CAPN1P07384 PCNPP3-201ENST00000393579 471 ntBASIC-0.01□□□□□ -2.41
CAPN1P07384 AC113618.1-201ENST00000416747 285 ntBASIC-0.01□□□□□ -2.41
CAPN1P07384 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.01□□□□□ -2.41
CAPN1P07384 RNU6-135P-201ENST00000516769 101 ntBASIC-0.01□□□□□ -2.41
CAPN1P07384 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.01□□□□□ -2.41
CAPN1P07384 RNU6-570P-201ENST00000517051 105 ntBASIC-0.01□□□□□ -2.41
CAPN1P07384 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.01□□□□□ -2.41
CAPN1P07384 RNA5SP47-201ENST00000517230 109 ntBASIC-0.01□□□□□ -2.41
CAPN1P07384 MIR3152-201ENST00000579801 74 ntBASIC-0.01□□□□□ -2.41
CAPN1P07384 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.01□□□□□ -2.41
CAPN1P07384 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.01□□□□□ -2.41
CAPN1P07384 SNORA9.1-201ENST00000362412 131 ntBASIC-0.02□□□□□ -2.41
CAPN1P07384 SNORA22.1-201ENST00000362701 134 ntBASIC-0.02□□□□□ -2.41
CAPN1P07384 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.02□□□□□ -2.41
CAPN1P07384 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.02□□□□□ -2.41
CAPN1P07384 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.02□□□□□ -2.41
CAPN1P07384 SNORA20-201ENST00000384662 132 ntBASIC-0.02□□□□□ -2.41
CAPN1P07384 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
CAPN1P07384 RNU6-381P-201ENST00000391259 108 ntBASIC-0.02□□□□□ -2.41
CAPN1P07384 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.02□□□□□ -2.41
CAPN1P07384 RNA5SP227-201ENST00000516184 113 ntBASIC-0.02□□□□□ -2.41
CAPN1P07384 MTND5P34-201ENST00000568888 325 ntBASIC-0.02□□□□□ -2.41
CAPN1P07384 MIR3171-201ENST00000584270 74 ntBASIC-0.02□□□□□ -2.41
CAPN1P07384 AC104408.1-201ENST00000605241 170 ntBASIC-0.02□□□□□ -2.41
CAPN1P07384 U2.14-201ENST00000615943 113 ntBASIC-0.02□□□□□ -2.41
CAPN1P07384 AC021613.1-201ENST00000623880 111 ntBASIC-0.02□□□□□ -2.41
CAPN1P07384 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.03□□□□□ -2.41
CAPN1P07384 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.03□□□□□ -2.41
CAPN1P07384 SNORA25.16-201ENST00000516741 121 ntBASIC-0.03□□□□□ -2.41
CAPN1P07384 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.03□□□□□ -2.41
CAPN1P07384 AL442067.1-201ENST00000613261 223 ntBASIC-0.03□□□□□ -2.41
CAPN1P07384 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
CAPN1P07384 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.04□□□□□ -2.42
CAPN1P07384 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.04□□□□□ -2.42
CAPN1P07384 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.04□□□□□ -2.42
CAPN1P07384 SNORA18-201ENST00000384416 132 ntBASIC-0.04□□□□□ -2.42
CAPN1P07384 SNORD28-201ENST00000384706 75 ntBASIC-0.04□□□□□ -2.42
CAPN1P07384 AC020661.2-201ENST00000560114 134 ntBASIC-0.04□□□□□ -2.42
CAPN1P07384 AC091304.10-201ENST00000641554 121 ntBASIC-0.04□□□□□ -2.42
CAPN1P07384 RNY1P13-201ENST00000365030 105 ntBASIC-0.05□□□□□ -2.42
CAPN1P07384 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.05□□□□□ -2.42
CAPN1P07384 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.05□□□□□ -2.42
CAPN1P07384 RNU6-535P-201ENST00000384722 107 ntBASIC-0.05□□□□□ -2.42
CAPN1P07384 TRBVB-201ENST00000477100 408 ntBASIC-0.05□□□□□ -2.42
CAPN1P07384 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.05□□□□□ -2.42
CAPN1P07384 AL442663.2-201ENST00000554385 511 ntBASIC-0.05□□□□□ -2.42
CAPN1P07384 MIR4639-201ENST00000584938 69 ntBASIC-0.05□□□□□ -2.42
CAPN1P07384 AL365265.1-201ENST00000621045 234 ntBASIC-0.05□□□□□ -2.42
CAPN1P07384 SNORD114-5-201ENST00000362928 70 ntBASIC-0.06□□□□□ -2.42
CAPN1P07384 RNU6-728P-201ENST00000365375 104 ntBASIC-0.06□□□□□ -2.42
CAPN1P07384 RNU6-127P-201ENST00000390897 107 ntBASIC-0.06□□□□□ -2.42
CAPN1P07384 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.06□□□□□ -2.42
CAPN1P07384 RNU4-43P-201ENST00000410628 137 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms