Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.86□□□□□ -2.55
HLA-DQB2P05538 RNU4-70P-201ENST00000384579 139 ntBASIC-0.86□□□□□ -2.55
HLA-DQB2P05538 PMCHL1-202ENST00000423102 261 ntBASIC-0.86□□□□□ -2.55
HLA-DQB2P05538 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.86□□□□□ -2.55
HLA-DQB2P05538 U8.20-201ENST00000459445 131 ntBASIC-0.86□□□□□ -2.55
HLA-DQB2P05538 RNA5SP153-201ENST00000516498 76 ntBASIC-0.86□□□□□ -2.55
HLA-DQB2P05538 RNU7-188P-201ENST00000517063 64 ntBASIC-0.86□□□□□ -2.55
HLA-DQB2P05538 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.86□□□□□ -2.55
HLA-DQB2P05538 MIR548H5-201ENST00000580314 60 ntBASIC-0.86□□□□□ -2.55
HLA-DQB2P05538 MIR3129-201ENST00000581095 76 ntBASIC-0.86□□□□□ -2.55
HLA-DQB2P05538 AC006006.1-201ENST00000603082 144 ntBASIC-0.86□□□□□ -2.55
HLA-DQB2P05538 AC002553.4-201ENST00000616896 331 ntBASIC-0.86□□□□□ -2.55
HLA-DQB2P05538 RNY1P2-201ENST00000364820 117 ntBASIC-0.87□□□□□ -2.55
HLA-DQB2P05538 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.87□□□□□ -2.55
HLA-DQB2P05538 RNU7-35P-201ENST00000517174 62 ntBASIC-0.87□□□□□ -2.55
HLA-DQB2P05538 MIR4473-201ENST00000583731 91 ntBASIC-0.87□□□□□ -2.55
HLA-DQB2P05538 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.87□□□□□ -2.55
HLA-DQB2P05538 AC133104.2-201ENST00000615272 193 ntBASIC-0.87□□□□□ -2.55
HLA-DQB2P05538 AC007485.1-201ENST00000616755 206 ntBASIC-0.87□□□□□ -2.55
HLA-DQB2P05538 RNU4-73P-201ENST00000363164 141 ntBASIC-0.88□□□□□ -2.55
HLA-DQB2P05538 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.88□□□□□ -2.55
HLA-DQB2P05538 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.88□□□□□ -2.55
HLA-DQB2P05538 MIR599-201ENST00000385069 95 ntBASIC-0.88□□□□□ -2.55
HLA-DQB2P05538 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.88□□□□□ -2.55
HLA-DQB2P05538 SNORD75.1-201ENST00000408373 60 ntBASIC-0.88□□□□□ -2.55
HLA-DQB2P05538 RNU6-130P-201ENST00000411112 103 ntBASIC-0.88□□□□□ -2.55
HLA-DQB2P05538 RNU6-718P-201ENST00000516166 105 ntBASIC-0.88□□□□□ -2.55
HLA-DQB2P05538 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.88□□□□□ -2.55
HLA-DQB2P05538 RNU7-70P-201ENST00000516941 66 ntBASIC-0.88□□□□□ -2.55
HLA-DQB2P05538 RNA5SP66-201ENST00000517178 101 ntBASIC-0.88□□□□□ -2.55
HLA-DQB2P05538 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.89□□□□□ -2.55
HLA-DQB2P05538 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.89□□□□□ -2.55
HLA-DQB2P05538 SNORD113-8-201ENST00000363497 74 ntBASIC-0.89□□□□□ -2.55
HLA-DQB2P05538 RNU6-449P-201ENST00000383914 107 ntBASIC-0.89□□□□□ -2.55
HLA-DQB2P05538 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.89□□□□□ -2.55
HLA-DQB2P05538 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.89□□□□□ -2.55
HLA-DQB2P05538 MIR604-201ENST00000384880 94 ntBASIC-0.89□□□□□ -2.55
HLA-DQB2P05538 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.89□□□□□ -2.55
HLA-DQB2P05538 SNORA3B-201ENST00000391305 131 ntBASIC-0.89□□□□□ -2.55
HLA-DQB2P05538 MIR1277-201ENST00000408536 78 ntBASIC-0.89□□□□□ -2.55
HLA-DQB2P05538 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.89□□□□□ -2.55
HLA-DQB2P05538 SNORD116.3-201ENST00000517176 78 ntBASIC-0.89□□□□□ -2.55
HLA-DQB2P05538 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.89□□□□□ -2.55
HLA-DQB2P05538 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.9□□□□□ -2.55
HLA-DQB2P05538 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.9□□□□□ -2.55
HLA-DQB2P05538 RNU6-102P-201ENST00000384485 104 ntBASIC-0.9□□□□□ -2.55
HLA-DQB2P05538 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.9□□□□□ -2.55
HLA-DQB2P05538 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.9□□□□□ -2.55
HLA-DQB2P05538 RNU6-735P-201ENST00000410612 107 ntBASIC-0.9□□□□□ -2.55
HLA-DQB2P05538 AC069439.1-201ENST00000494739 167 ntBASIC-0.9□□□□□ -2.55
HLA-DQB2P05538 SNORA40.14-201ENST00000516543 86 ntBASIC-0.9□□□□□ -2.55
HLA-DQB2P05538 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.9□□□□□ -2.55
HLA-DQB2P05538 AC098479.1-201ENST00000609225 154 ntBASIC-0.9□□□□□ -2.55
HLA-DQB2P05538 PART1_1.1-201ENST00000611761 217 ntBASIC-0.9□□□□□ -2.55
HLA-DQB2P05538 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.9□□□□□ -2.55
HLA-DQB2P05538 SNORD114-14-201ENST00000362723 75 ntBASIC-0.91□□□□□ -2.56
HLA-DQB2P05538 RNU4-24P-201ENST00000364565 139 ntBASIC-0.91□□□□□ -2.56
HLA-DQB2P05538 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.91□□□□□ -2.56
HLA-DQB2P05538 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.91□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.91□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.91□□□□□ -2.56
HLA-DQB2P05538 MIR548F1-201ENST00000408667 84 ntBASIC-0.91□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.91□□□□□ -2.56
HLA-DQB2P05538 AL022718.1-201ENST00000412004 84 ntBASIC-0.91□□□□□ -2.56
HLA-DQB2P05538 HSPE1P25-201ENST00000455484 251 ntBASIC-0.91□□□□□ -2.56
HLA-DQB2P05538 RNU6-893P-201ENST00000458841 100 ntBASIC-0.91□□□□□ -2.56
HLA-DQB2P05538 RNU6-559P-201ENST00000516151 98 ntBASIC-0.91□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.91□□□□□ -2.56
HLA-DQB2P05538 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.91□□□□□ -2.56
HLA-DQB2P05538 RNU7-10P-201ENST00000607194 63 ntBASIC-0.91□□□□□ -2.56
HLA-DQB2P05538 AL138825.1-201ENST00000618587 192 ntBASIC-0.91□□□□□ -2.56
HLA-DQB2P05538 SNORA32-201ENST00000384072 121 ntBASIC-0.92□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.92□□□□□ -2.56
HLA-DQB2P05538 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.92□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.92□□□□□ -2.56
HLA-DQB2P05538 RNU6-455P-201ENST00000384681 107 ntBASIC-0.92□□□□□ -2.56
HLA-DQB2P05538 MIR635-201ENST00000384830 98 ntBASIC-0.92□□□□□ -2.56
HLA-DQB2P05538 MT-TQ-201ENST00000387372 72 ntBASIC-0.92□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.92□□□□□ -2.56
HLA-DQB2P05538 TRAJ51-201ENST00000504127 63 ntBASIC-0.92□□□□□ -2.56
HLA-DQB2P05538 RNU6-720P-201ENST00000516363 108 ntBASIC-0.92□□□□□ -2.56
HLA-DQB2P05538 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.92□□□□□ -2.56
HLA-DQB2P05538 RNU6-358P-201ENST00000516564 75 ntBASIC-0.92□□□□□ -2.56
HLA-DQB2P05538 MIR3920-201ENST00000581751 86 ntBASIC-0.92□□□□□ -2.56
HLA-DQB2P05538 MIR4436A-201ENST00000585278 85 ntBASIC-0.92□□□□□ -2.56
HLA-DQB2P05538 RNU6-845P-201ENST00000362578 103 ntBASIC-0.93□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.93□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.93□□□□□ -2.56
HLA-DQB2P05538 RNU6-47P-201ENST00000383866 107 ntBASIC-0.93□□□□□ -2.56
HLA-DQB2P05538 RNU6-662P-201ENST00000384253 104 ntBASIC-0.93□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.93□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.93□□□□□ -2.56
HLA-DQB2P05538 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.93□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.516-201ENST00000384541 124 ntBASIC-0.93□□□□□ -2.56
HLA-DQB2P05538 AC097635.1-201ENST00000450678 155 ntBASIC-0.93□□□□□ -2.56
HLA-DQB2P05538 SNRPGP8-201ENST00000454064 226 ntBASIC-0.93□□□□□ -2.56
HLA-DQB2P05538 RNU7-137P-201ENST00000516788 62 ntBASIC-0.93□□□□□ -2.56
HLA-DQB2P05538 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.93□□□□□ -2.56
HLA-DQB2P05538 AL008718.3-201ENST00000610217 321 ntBASIC-0.93□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.3-201ENST00000362331 103 ntBASIC-0.94□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms