Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 RNU6-893P-201ENST00000458841 100 ntBASIC1.93□□□□□ -2.1
CHGBP05060 RNU6-640P-201ENST00000363693 105 ntBASIC1.92□□□□□ -2.1
CHGBP05060 RNU6-1131P-201ENST00000364955 107 ntBASIC1.92□□□□□ -2.1
CHGBP05060 MIR513A1-201ENST00000385138 129 ntBASIC1.92□□□□□ -2.1
CHGBP05060 SNORD77B-201ENST00000391112 67 ntBASIC1.92□□□□□ -2.1
CHGBP05060 RNU4-62P-201ENST00000410125 130 ntBASIC1.92□□□□□ -2.1
CHGBP05060 MIR1912-201ENST00000410389 80 ntBASIC1.92□□□□□ -2.1
CHGBP05060 SNORA40.13-201ENST00000516379 120 ntBASIC1.92□□□□□ -2.1
CHGBP05060 RNU6-922P-201ENST00000516753 99 ntBASIC1.92□□□□□ -2.1
CHGBP05060 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.92□□□□□ -2.1
CHGBP05060 Y_RNA.299-201ENST00000364973 94 ntBASIC1.91□□□□□ -2.1
CHGBP05060 MIR605-201ENST00000385078 83 ntBASIC1.91□□□□□ -2.1
CHGBP05060 RPS3AP1-201ENST00000413190 320 ntBASIC1.91□□□□□ -2.1
CHGBP05060 AC245047.7-201ENST00000440265 293 ntBASIC1.91□□□□□ -2.1
CHGBP05060 RNU6-970P-201ENST00000516312 107 ntBASIC1.91□□□□□ -2.1
CHGBP05060 SNORA44.1-201ENST00000517031 108 ntBASIC1.91□□□□□ -2.1
CHGBP05060 AC024614.2-201ENST00000577584 372 ntBASIC1.91□□□□□ -2.1
CHGBP05060 MIR6841-201ENST00000637129 72 ntBASIC1.91□□□□□ -2.1
CHGBP05060 RNU4-67P-201ENST00000364569 141 ntBASIC1.9□□□□□ -2.11
CHGBP05060 RNU6-409P-201ENST00000384114 104 ntBASIC1.9□□□□□ -2.11
CHGBP05060 Y_RNA.544-201ENST00000384650 113 ntBASIC1.9□□□□□ -2.11
CHGBP05060 AL603825.1-201ENST00000438481 80 ntBASIC1.9□□□□□ -2.11
CHGBP05060 snoU13.16-201ENST00000459350 104 ntBASIC1.9□□□□□ -2.11
CHGBP05060 RNU7-41P-201ENST00000515917 61 ntBASIC1.9□□□□□ -2.11
CHGBP05060 RNU6-322P-201ENST00000516010 103 ntBASIC1.9□□□□□ -2.11
CHGBP05060 RNU7-43P-201ENST00000516554 64 ntBASIC1.9□□□□□ -2.11
CHGBP05060 DEFB131E-201ENST00000532329 154 ntBASIC1.9□□□□□ -2.11
CHGBP05060 MIR502-201ENST00000606349 86 ntBASIC1.9□□□□□ -2.11
CHGBP05060 RNY3P2-201ENST00000362918 102 ntBASIC1.89□□□□□ -2.11
CHGBP05060 Y_RNA.140-201ENST00000363474 103 ntBASIC1.89□□□□□ -2.11
CHGBP05060 RNU1-42P-201ENST00000364033 160 ntBASIC1.89□□□□□ -2.11
CHGBP05060 RNU4-36P-201ENST00000364294 144 ntBASIC1.89□□□□□ -2.11
CHGBP05060 RNU6-342P-201ENST00000384521 104 ntBASIC1.89□□□□□ -2.11
CHGBP05060 RNU6-1237P-201ENST00000384777 107 ntBASIC1.89□□□□□ -2.11
CHGBP05060 MIR194-1-201ENST00000384892 85 ntBASIC1.89□□□□□ -2.11
CHGBP05060 AL451046.2-201ENST00000403074 277 ntBASIC1.89□□□□□ -2.11
CHGBP05060 RNU6-733P-201ENST00000410759 104 ntBASIC1.89□□□□□ -2.11
CHGBP05060 MIR1270-201ENST00000459320 83 ntBASIC1.89□□□□□ -2.11
CHGBP05060 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.89□□□□□ -2.11
CHGBP05060 MIR548AO-201ENST00000579992 96 ntBASIC1.89□□□□□ -2.11
CHGBP05060 MIR4251-201ENST00000635819 61 ntBASIC1.89□□□□□ -2.11
CHGBP05060 AC090844.1-201ENST00000422019 156 ntBASIC1.88□□□□□ -2.11
CHGBP05060 JTBP1-201ENST00000441314 247 ntBASIC1.88□□□□□ -2.11
CHGBP05060 RNU6-904P-201ENST00000516206 101 ntBASIC1.88□□□□□ -2.11
CHGBP05060 RNU6-947P-201ENST00000516264 106 ntBASIC1.88□□□□□ -2.11
CHGBP05060 FAM71BP1-201ENST00000604431 523 ntBASIC1.88□□□□□ -2.11
CHGBP05060 SNORD115-2-201ENST00000362842 82 ntBASIC1.87□□□□□ -2.11
CHGBP05060 RNU6-363P-201ENST00000362895 105 ntBASIC1.87□□□□□ -2.11
CHGBP05060 SNORD115-19-201ENST00000363098 82 ntBASIC1.87□□□□□ -2.11
CHGBP05060 SNORD115-18-201ENST00000363293 82 ntBASIC1.87□□□□□ -2.11
CHGBP05060 SNORD115-17-201ENST00000364612 82 ntBASIC1.87□□□□□ -2.11
CHGBP05060 SNORD115-20-201ENST00000365099 82 ntBASIC1.87□□□□□ -2.11
CHGBP05060 SNORA18-201ENST00000384416 132 ntBASIC1.87□□□□□ -2.11
CHGBP05060 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.87□□□□□ -2.11
CHGBP05060 RNU6-237P-201ENST00000515985 71 ntBASIC1.87□□□□□ -2.11
CHGBP05060 SNORD111.1-201ENST00000516421 86 ntBASIC1.87□□□□□ -2.11
CHGBP05060 CYP3A52P-201ENST00000563326 91 ntBASIC1.87□□□□□ -2.11
CHGBP05060 MIR3198-2-201ENST00000577868 80 ntBASIC1.87□□□□□ -2.11
CHGBP05060 MIR8055-201ENST00000610739 97 ntBASIC1.87□□□□□ -2.11
CHGBP05060 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.87□□□□□ -2.11
CHGBP05060 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
CHGBP05060 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.86□□□□□ -2.11
CHGBP05060 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CHGBP05060 Y_RNA.360-201ENST00000365512 102 ntBASIC1.86□□□□□ -2.11
CHGBP05060 Y_RNA.430-201ENST00000384081 110 ntBASIC1.86□□□□□ -2.11
CHGBP05060 RNU6-49P-201ENST00000384256 107 ntBASIC1.86□□□□□ -2.11
CHGBP05060 RNY1P7-201ENST00000384743 110 ntBASIC1.86□□□□□ -2.11
CHGBP05060 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CHGBP05060 RNU6-482P-201ENST00000391068 107 ntBASIC1.86□□□□□ -2.11
CHGBP05060 RPL31P63-201ENST00000422565 375 ntBASIC1.86□□□□□ -2.11
CHGBP05060 AC008834.1-201ENST00000511612 175 ntBASIC1.86□□□□□ -2.11
CHGBP05060 RNU6-795P-201ENST00000516323 103 ntBASIC1.86□□□□□ -2.11
CHGBP05060 RNU6-521P-201ENST00000516663 105 ntBASIC1.86□□□□□ -2.11
CHGBP05060 AL512310.12-203ENST00000640543 90 ntBASIC1.86□□□□□ -2.11
CHGBP05060 RNU6-1099P-201ENST00000363533 107 ntBASIC1.85□□□□□ -2.11
CHGBP05060 RNU6-60P-201ENST00000364792 103 ntBASIC1.85□□□□□ -2.11
CHGBP05060 Y_RNA.369-201ENST00000365568 117 ntBASIC1.85□□□□□ -2.11
CHGBP05060 MIR488-201ENST00000365739 83 ntBASIC1.85□□□□□ -2.11
CHGBP05060 RNU6-602P-201ENST00000411155 105 ntBASIC1.85□□□□□ -2.11
CHGBP05060 RNA5SP445-201ENST00000515889 115 ntBASIC1.85□□□□□ -2.11
CHGBP05060 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.85□□□□□ -2.11
CHGBP05060 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.85□□□□□ -2.11
CHGBP05060 MIR8063-201ENST00000621930 81 ntBASIC1.85□□□□□ -2.11
CHGBP05060 Y_RNA.78-201ENST00000362970 110 ntBASIC1.84□□□□□ -2.11
CHGBP05060 Y_RNA.107-201ENST00000363190 121 ntBASIC1.84□□□□□ -2.11
CHGBP05060 SNORA25.3-201ENST00000363205 127 ntBASIC1.84□□□□□ -2.11
CHGBP05060 MIR577-201ENST00000385196 96 ntBASIC1.84□□□□□ -2.11
CHGBP05060 MIR653-201ENST00000385279 96 ntBASIC1.84□□□□□ -2.11
CHGBP05060 RNU6-679P-201ENST00000391003 106 ntBASIC1.84□□□□□ -2.11
CHGBP05060 RNU6-1086P-201ENST00000410930 100 ntBASIC1.84□□□□□ -2.11
CHGBP05060 AC009474.2-201ENST00000451383 136 ntBASIC1.84□□□□□ -2.11
CHGBP05060 SCARNA23-201ENST00000516060 130 ntBASIC1.84□□□□□ -2.11
CHGBP05060 AP000942.3-201ENST00000603702 160 ntBASIC1.84□□□□□ -2.11
CHGBP05060 Y_RNA.818-201ENST00000618813 71 ntBASIC1.84□□□□□ -2.11
CHGBP05060 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CHGBP05060 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.83□□□□□ -2.12
CHGBP05060 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CHGBP05060 RNU6-832P-201ENST00000363319 107 ntBASIC1.83□□□□□ -2.12
CHGBP05060 RNU6-294P-201ENST00000364999 102 ntBASIC1.83□□□□□ -2.12
CHGBP05060 MIR30A-201ENST00000385092 71 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms