Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC242498.1-201ENST00000604134 111 ntBASIC0.96□□□□□ -2.26
CLPTM1O96005 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CLPTM1O96005 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CLPTM1O96005 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CLPTM1O96005 SNORA22.1-201ENST00000362701 134 ntBASIC0.95□□□□□ -2.26
CLPTM1O96005 Y_RNA.294-201ENST00000364916 102 ntBASIC0.95□□□□□ -2.26
CLPTM1O96005 RNY1P5-201ENST00000383890 115 ntBASIC0.95□□□□□ -2.26
CLPTM1O96005 RNU6-187P-201ENST00000384139 106 ntBASIC0.95□□□□□ -2.26
CLPTM1O96005 SNORD38B-201ENST00000384690 67 ntBASIC0.95□□□□□ -2.26
CLPTM1O96005 SNORD12C-201ENST00000386307 89 ntBASIC0.95□□□□□ -2.26
CLPTM1O96005 RNU6-1319P-201ENST00000390855 104 ntBASIC0.95□□□□□ -2.26
CLPTM1O96005 RNU6-747P-201ENST00000390928 104 ntBASIC0.95□□□□□ -2.26
CLPTM1O96005 RNU6-241P-201ENST00000391148 104 ntBASIC0.95□□□□□ -2.26
CLPTM1O96005 AL603914.1-201ENST00000401964 204 ntBASIC0.95□□□□□ -2.26
CLPTM1O96005 RNU6-177P-201ENST00000411257 104 ntBASIC0.95□□□□□ -2.26
CLPTM1O96005 RPS3AP1-201ENST00000413190 320 ntBASIC0.95□□□□□ -2.26
CLPTM1O96005 AC002429.1-201ENST00000437672 148 ntBASIC0.95□□□□□ -2.26
CLPTM1O96005 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.95□□□□□ -2.26
CLPTM1O96005 RNU7-90P-201ENST00000459216 62 ntBASIC0.95□□□□□ -2.26
CLPTM1O96005 RPL39P28-201ENST00000465655 155 ntBASIC0.95□□□□□ -2.26
CLPTM1O96005 AP001328.1-201ENST00000528550 176 ntBASIC0.95□□□□□ -2.26
CLPTM1O96005 AP000753.3-201ENST00000604083 169 ntBASIC0.95□□□□□ -2.26
CLPTM1O96005 SNORD38B-202ENST00000625943 69 ntBASIC0.95□□□□□ -2.26
CLPTM1O96005 MIR6841-201ENST00000637129 72 ntBASIC0.95□□□□□ -2.26
CLPTM1O96005 Y_RNA.191-201ENST00000363972 113 ntBASIC0.94□□□□□ -2.26
CLPTM1O96005 RNU6-42P-201ENST00000384165 107 ntBASIC0.94□□□□□ -2.26
CLPTM1O96005 SNORD12-201ENST00000391002 90 ntBASIC0.94□□□□□ -2.26
CLPTM1O96005 snoU13.21-201ENST00000459368 105 ntBASIC0.94□□□□□ -2.26
CLPTM1O96005 Y_RNA.703-201ENST00000516846 111 ntBASIC0.94□□□□□ -2.26
CLPTM1O96005 MIR4264-201ENST00000583520 66 ntBASIC0.94□□□□□ -2.26
CLPTM1O96005 AC108081.1-201ENST00000604358 221 ntBASIC0.94□□□□□ -2.26
CLPTM1O96005 RNU6-94P-201ENST00000607728 107 ntBASIC0.94□□□□□ -2.26
CLPTM1O96005 AC010332.2-201ENST00000613083 1904 ntBASIC0.93□□□□□ -2.26
CLPTM1O96005 Y_RNA.343-201ENST00000365354 112 ntBASIC0.93□□□□□ -2.26
CLPTM1O96005 Y_RNA.366-201ENST00000365540 102 ntBASIC0.93□□□□□ -2.26
CLPTM1O96005 Y_RNA.568-201ENST00000384742 113 ntBASIC0.93□□□□□ -2.26
CLPTM1O96005 MT-TN-201ENST00000387400 73 ntBASIC0.93□□□□□ -2.26
CLPTM1O96005 RNA5SP261-201ENST00000410536 106 ntBASIC0.93□□□□□ -2.26
CLPTM1O96005 AC087343.1-201ENST00000477341 475 ntBASIC0.93□□□□□ -2.26
CLPTM1O96005 RNA5SP220-201ENST00000516298 104 ntBASIC0.93□□□□□ -2.26
CLPTM1O96005 AC036111.3-201ENST00000526389 112 ntBASIC0.93□□□□□ -2.26
CLPTM1O96005 MIR4661-201ENST00000582720 75 ntBASIC0.93□□□□□ -2.26
CLPTM1O96005 uc_338.6-201ENST00000613544 171 ntBASIC0.93□□□□□ -2.26
CLPTM1O96005 MIR6740-201ENST00000618268 113 ntBASIC0.93□□□□□ -2.26
CLPTM1O96005 MIR377-201ENST00000362145 69 ntBASIC0.92□□□□□ -2.26
CLPTM1O96005 Y_RNA.171-201ENST00000363760 102 ntBASIC0.92□□□□□ -2.26
CLPTM1O96005 SNORD114-27-201ENST00000363766 70 ntBASIC0.92□□□□□ -2.26
CLPTM1O96005 Y_RNA.430-201ENST00000384081 110 ntBASIC0.92□□□□□ -2.26
CLPTM1O96005 Y_RNA.466-201ENST00000384294 113 ntBASIC0.92□□□□□ -2.26
CLPTM1O96005 RNA5SP144-201ENST00000410846 116 ntBASIC0.92□□□□□ -2.26
CLPTM1O96005 POLR2J4-204ENST00000418424 324 ntBASIC0.92□□□□□ -2.26
CLPTM1O96005 MTND4LP9-201ENST00000427694 174 ntBASIC0.92□□□□□ -2.26
CLPTM1O96005 SUMO1P3-201ENST00000439961 304 ntBASIC0.92□□□□□ -2.26
CLPTM1O96005 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.92□□□□□ -2.26
CLPTM1O96005 RNU7-62P-201ENST00000458856 62 ntBASIC0.92□□□□□ -2.26
CLPTM1O96005 SNORD124-201ENST00000459577 104 ntBASIC0.92□□□□□ -2.26
CLPTM1O96005 RNU6-1258P-201ENST00000516911 111 ntBASIC0.92□□□□□ -2.26
CLPTM1O96005 AC133485.4-201ENST00000561835 220 ntBASIC0.92□□□□□ -2.26
CLPTM1O96005 AC138907.4-201ENST00000570107 226 ntBASIC0.92□□□□□ -2.26
CLPTM1O96005 Y_RNA.757-201ENST00000578934 114 ntBASIC0.92□□□□□ -2.26
CLPTM1O96005 MIR3152-201ENST00000579801 74 ntBASIC0.92□□□□□ -2.26
CLPTM1O96005 AC021443.1-201ENST00000604478 211 ntBASIC0.92□□□□□ -2.26
CLPTM1O96005 SNORD114-21-201ENST00000606412 72 ntBASIC0.92□□□□□ -2.26
CLPTM1O96005 AC011603.4-201ENST00000611325 277 ntBASIC0.92□□□□□ -2.26
CLPTM1O96005 MIR6504-201ENST00000613520 61 ntBASIC0.92□□□□□ -2.26
CLPTM1O96005 Y_RNA.168-201ENST00000363740 102 ntBASIC0.91□□□□□ -2.26
CLPTM1O96005 RNU6-746P-201ENST00000384112 109 ntBASIC0.91□□□□□ -2.26
CLPTM1O96005 MIR588-201ENST00000384900 83 ntBASIC0.91□□□□□ -2.26
CLPTM1O96005 RNU6-257P-201ENST00000410238 98 ntBASIC0.91□□□□□ -2.26
CLPTM1O96005 AC015818.7-201ENST00000428754 109 ntBASIC0.91□□□□□ -2.26
CLPTM1O96005 AC087499.7-201ENST00000441958 109 ntBASIC0.91□□□□□ -2.26
CLPTM1O96005 RNU2-35P-201ENST00000516446 142 ntBASIC0.91□□□□□ -2.26
CLPTM1O96005 Y_RNA.692-201ENST00000516627 105 ntBASIC0.91□□□□□ -2.26
CLPTM1O96005 AC106800.4-201ENST00000614905 153 ntBASIC0.91□□□□□ -2.26
CLPTM1O96005 AP001340.1-201ENST00000624405 217 ntBASIC0.91□□□□□ -2.26
CLPTM1O96005 Y_RNA.114-201ENST00000363265 113 ntBASIC0.9□□□□□ -2.27
CLPTM1O96005 SNORD113.3-201ENST00000364630 78 ntBASIC0.9□□□□□ -2.27
CLPTM1O96005 RNU6-1237P-201ENST00000384777 107 ntBASIC0.9□□□□□ -2.27
CLPTM1O96005 MIR19B1-201ENST00000384829 87 ntBASIC0.9□□□□□ -2.27
CLPTM1O96005 RNA5SP102-201ENST00000516865 106 ntBASIC0.9□□□□□ -2.27
CLPTM1O96005 MIR3121-201ENST00000579680 77 ntBASIC0.9□□□□□ -2.27
CLPTM1O96005 MIR4452-201ENST00000583004 71 ntBASIC0.9□□□□□ -2.27
CLPTM1O96005 MIR4305-201ENST00000583252 102 ntBASIC0.9□□□□□ -2.27
CLPTM1O96005 U7.2-201ENST00000607576 63 ntBASIC0.9□□□□□ -2.27
CLPTM1O96005 RNU6-342P-201ENST00000384521 104 ntBASIC0.89□□□□□ -2.27
CLPTM1O96005 MIR548M-201ENST00000408260 86 ntBASIC0.89□□□□□ -2.27
CLPTM1O96005 RNU6-1165P-201ENST00000410119 107 ntBASIC0.89□□□□□ -2.27
CLPTM1O96005 RNU6-994P-201ENST00000410507 111 ntBASIC0.89□□□□□ -2.27
CLPTM1O96005 SNORD83.1-201ENST00000411362 77 ntBASIC0.89□□□□□ -2.27
CLPTM1O96005 AL512326.2-201ENST00000426359 151 ntBASIC0.89□□□□□ -2.27
CLPTM1O96005 snoU13.2-201ENST00000459201 104 ntBASIC0.89□□□□□ -2.27
CLPTM1O96005 RNU7-164P-201ENST00000459221 62 ntBASIC0.89□□□□□ -2.27
CLPTM1O96005 AC113410.1-201ENST00000505029 247 ntBASIC0.89□□□□□ -2.27
CLPTM1O96005 RNU7-123P-201ENST00000515911 60 ntBASIC0.89□□□□□ -2.27
CLPTM1O96005 RNU6-113P-201ENST00000516653 101 ntBASIC0.89□□□□□ -2.27
CLPTM1O96005 IGKV1-22-201ENST00000524313 326 ntBASIC0.89□□□□□ -2.27
CLPTM1O96005 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.89□□□□□ -2.27
CLPTM1O96005 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.89□□□□□ -2.27
CLPTM1O96005 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
CLPTM1O96005 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms