Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 HMGN1P33-201ENST00000432945 451 ntBASIC1.92□□□□□ -2.1
CNOT4O95628 JTBP1-201ENST00000441314 247 ntBASIC1.92□□□□□ -2.1
CNOT4O95628 RNU7-43P-201ENST00000516554 64 ntBASIC1.92□□□□□ -2.1
CNOT4O95628 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CNOT4O95628 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CNOT4O95628 RNU6-170P-201ENST00000362832 104 ntBASIC1.91□□□□□ -2.1
CNOT4O95628 SNORA64-201ENST00000384674 134 ntBASIC1.91□□□□□ -2.1
CNOT4O95628 AC096949.1-201ENST00000412047 152 ntBASIC1.91□□□□□ -2.1
CNOT4O95628 AC004941.2-201ENST00000427009 228 ntBASIC1.91□□□□□ -2.1
CNOT4O95628 RNU7-61P-201ENST00000515897 61 ntBASIC1.91□□□□□ -2.1
CNOT4O95628 RNU6-917P-201ENST00000516294 104 ntBASIC1.91□□□□□ -2.1
CNOT4O95628 RNU6-795P-201ENST00000516323 103 ntBASIC1.91□□□□□ -2.1
CNOT4O95628 RNU6-1018P-201ENST00000516577 106 ntBASIC1.91□□□□□ -2.1
CNOT4O95628 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.91□□□□□ -2.1
CNOT4O95628 AC008133.2-201ENST00000624540 351 ntBASIC1.91□□□□□ -2.1
CNOT4O95628 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
CNOT4O95628 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
CNOT4O95628 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CNOT4O95628 RNA5SP37-201ENST00000365420 130 ntBASIC1.9□□□□□ -2.11
CNOT4O95628 Y_RNA.377-201ENST00000365644 108 ntBASIC1.9□□□□□ -2.11
CNOT4O95628 RNU6-1201P-201ENST00000384227 107 ntBASIC1.9□□□□□ -2.11
CNOT4O95628 SNORA18-201ENST00000384416 132 ntBASIC1.9□□□□□ -2.11
CNOT4O95628 AL023284.1-201ENST00000403956 276 ntBASIC1.9□□□□□ -2.11
CNOT4O95628 HSPE1P24-201ENST00000450782 238 ntBASIC1.9□□□□□ -2.11
CNOT4O95628 RNU6-521P-201ENST00000516663 105 ntBASIC1.9□□□□□ -2.11
CNOT4O95628 RNU1-40P-201ENST00000516816 164 ntBASIC1.9□□□□□ -2.11
CNOT4O95628 RNU1-97P-201ENST00000516872 164 ntBASIC1.9□□□□□ -2.11
CNOT4O95628 AC026421.1-201ENST00000519101 163 ntBASIC1.9□□□□□ -2.11
CNOT4O95628 MIR4764-201ENST00000580680 88 ntBASIC1.9□□□□□ -2.11
CNOT4O95628 MIR8055-201ENST00000610739 97 ntBASIC1.9□□□□□ -2.11
CNOT4O95628 AC012531.4-201ENST00000616509 177 ntBASIC1.9□□□□□ -2.11
CNOT4O95628 SNORD45B-201ENST00000364617 72 ntBASIC1.89□□□□□ -2.11
CNOT4O95628 RNU6-1134P-201ENST00000365156 101 ntBASIC1.89□□□□□ -2.11
CNOT4O95628 RNU6-203P-201ENST00000384038 104 ntBASIC1.89□□□□□ -2.11
CNOT4O95628 MIR4285-201ENST00000581001 85 ntBASIC1.89□□□□□ -2.11
CNOT4O95628 AC062037.1-201ENST00000605302 128 ntBASIC1.89□□□□□ -2.11
CNOT4O95628 MIR8063-201ENST00000621930 81 ntBASIC1.89□□□□□ -2.11
CNOT4O95628 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
CNOT4O95628 Y_RNA.290-201ENST00000364879 114 ntBASIC1.88□□□□□ -2.11
CNOT4O95628 Y_RNA.338-201ENST00000365320 114 ntBASIC1.88□□□□□ -2.11
CNOT4O95628 Y_RNA.354-201ENST00000365448 111 ntBASIC1.88□□□□□ -2.11
CNOT4O95628 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.88□□□□□ -2.11
CNOT4O95628 RNU6-644P-201ENST00000391155 98 ntBASIC1.88□□□□□ -2.11
CNOT4O95628 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CNOT4O95628 AC005908.1-201ENST00000468701 347 ntBASIC1.88□□□□□ -2.11
CNOT4O95628 uc_338.20-201ENST00000621563 178 ntBASIC1.88□□□□□ -2.11
CNOT4O95628 Z97988.1-201ENST00000637697 135 ntBASIC1.88□□□□□ -2.11
CNOT4O95628 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
CNOT4O95628 RNU6-1313P-201ENST00000362622 102 ntBASIC1.87□□□□□ -2.11
CNOT4O95628 Y_RNA.140-201ENST00000363474 103 ntBASIC1.87□□□□□ -2.11
CNOT4O95628 MIR520C-201ENST00000385005 87 ntBASIC1.87□□□□□ -2.11
CNOT4O95628 MIR450A2-201ENST00000385022 100 ntBASIC1.87□□□□□ -2.11
CNOT4O95628 AC245047.7-201ENST00000440265 293 ntBASIC1.87□□□□□ -2.11
CNOT4O95628 AC104435.1-201ENST00000483483 166 ntBASIC1.87□□□□□ -2.11
CNOT4O95628 Y_RNA.659-201ENST00000515994 113 ntBASIC1.87□□□□□ -2.11
CNOT4O95628 RNU6-295P-201ENST00000516901 104 ntBASIC1.87□□□□□ -2.11
CNOT4O95628 U7.3-201ENST00000616123 62 ntBASIC1.87□□□□□ -2.11
CNOT4O95628 MIR8065-201ENST00000620577 100 ntBASIC1.87□□□□□ -2.11
CNOT4O95628 AL512310.12-203ENST00000640543 90 ntBASIC1.87□□□□□ -2.11
CNOT4O95628 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.87□□□□□ -2.11
CNOT4O95628 Y_RNA.96-201ENST00000363092 109 ntBASIC1.86□□□□□ -2.11
CNOT4O95628 RNU6-60P-201ENST00000364792 103 ntBASIC1.86□□□□□ -2.11
CNOT4O95628 RNU6-342P-201ENST00000384521 104 ntBASIC1.86□□□□□ -2.11
CNOT4O95628 MIR194-1-201ENST00000384892 85 ntBASIC1.86□□□□□ -2.11
CNOT4O95628 AC004965.1-201ENST00000413033 213 ntBASIC1.86□□□□□ -2.11
CNOT4O95628 MRPL35P3-201ENST00000421557 364 ntBASIC1.86□□□□□ -2.11
CNOT4O95628 RNU6-322P-201ENST00000516010 103 ntBASIC1.86□□□□□ -2.11
CNOT4O95628 RN7SKP12-201ENST00000516275 143 ntBASIC1.86□□□□□ -2.11
CNOT4O95628 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.86□□□□□ -2.11
CNOT4O95628 MIR4777-201ENST00000583710 86 ntBASIC1.86□□□□□ -2.11
CNOT4O95628 MIR548Z-201ENST00000584743 97 ntBASIC1.86□□□□□ -2.11
CNOT4O95628 AC096720.1-201ENST00000604441 183 ntBASIC1.86□□□□□ -2.11
CNOT4O95628 AC091304.10-201ENST00000641554 121 ntBASIC1.86□□□□□ -2.11
CNOT4O95628 AP000553.5-201ENST00000641933 54 ntBASIC1.86□□□□□ -2.11
CNOT4O95628 Y_RNA.95-201ENST00000363079 95 ntBASIC1.85□□□□□ -2.11
CNOT4O95628 SNORD115-35-201ENST00000365122 82 ntBASIC1.85□□□□□ -2.11
CNOT4O95628 RNU6-602P-201ENST00000411155 105 ntBASIC1.85□□□□□ -2.11
CNOT4O95628 AC108729.3-201ENST00000513484 108 ntBASIC1.85□□□□□ -2.11
CNOT4O95628 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.85□□□□□ -2.11
CNOT4O95628 RNU7-2P-201ENST00000516096 62 ntBASIC1.85□□□□□ -2.11
CNOT4O95628 RNU7-35P-201ENST00000517174 62 ntBASIC1.85□□□□□ -2.11
CNOT4O95628 CYP3A52P-201ENST00000563326 91 ntBASIC1.85□□□□□ -2.11
CNOT4O95628 MIR4422-201ENST00000581938 83 ntBASIC1.85□□□□□ -2.11
CNOT4O95628 AC012493.3-201ENST00000604494 112 ntBASIC1.85□□□□□ -2.11
CNOT4O95628 Y_RNA.164-201ENST00000363709 102 ntBASIC1.84□□□□□ -2.11
CNOT4O95628 RNU6-820P-201ENST00000384273 107 ntBASIC1.84□□□□□ -2.11
CNOT4O95628 MIR206-201ENST00000384872 86 ntBASIC1.84□□□□□ -2.11
CNOT4O95628 MIR653-201ENST00000385279 96 ntBASIC1.84□□□□□ -2.11
CNOT4O95628 SNORA26.9-201ENST00000391322 122 ntBASIC1.84□□□□□ -2.11
CNOT4O95628 RNU6-162P-201ENST00000516228 103 ntBASIC1.84□□□□□ -2.11
CNOT4O95628 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.84□□□□□ -2.11
CNOT4O95628 MIR4251-201ENST00000635819 61 ntBASIC1.84□□□□□ -2.11
CNOT4O95628 AL451046.2-201ENST00000403074 277 ntBASIC1.83□□□□□ -2.12
CNOT4O95628 Y_RNA.705-201ENST00000516862 110 ntBASIC1.83□□□□□ -2.12
CNOT4O95628 MIR548AO-201ENST00000579992 96 ntBASIC1.83□□□□□ -2.12
CNOT4O95628 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CNOT4O95628 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CNOT4O95628 MIR494-201ENST00000349529 81 ntBASIC1.82□□□□□ -2.12
CNOT4O95628 Y_RNA.4-201ENST00000362333 112 ntBASIC1.82□□□□□ -2.12
CNOT4O95628 RNA5SP173-201ENST00000364857 136 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms