Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 RNA5SP47-201ENST00000517230 109 ntBASIC-0.07□□□□□ -2.42
SEMA3DO95025 IGLVI-20-201ENST00000519296 130 ntBASIC-0.07□□□□□ -2.42
SEMA3DO95025 MTND5P34-201ENST00000568888 325 ntBASIC-0.07□□□□□ -2.42
SEMA3DO95025 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.07□□□□□ -2.42
SEMA3DO95025 MIR4290-201ENST00000583807 95 ntBASIC-0.07□□□□□ -2.42
SEMA3DO95025 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.08□□□□□ -2.42
SEMA3DO95025 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.08□□□□□ -2.42
SEMA3DO95025 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.08□□□□□ -2.42
SEMA3DO95025 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.08□□□□□ -2.42
SEMA3DO95025 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.08□□□□□ -2.42
SEMA3DO95025 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.08□□□□□ -2.42
SEMA3DO95025 RNY3P14-201ENST00000384309 102 ntBASIC-0.08□□□□□ -2.42
SEMA3DO95025 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
SEMA3DO95025 AL606845.1-201ENST00000404881 255 ntBASIC-0.08□□□□□ -2.42
SEMA3DO95025 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.08□□□□□ -2.42
SEMA3DO95025 RNU7-80P-201ENST00000459562 61 ntBASIC-0.08□□□□□ -2.42
SEMA3DO95025 AC141557.1-201ENST00000540982 400 ntBASIC-0.08□□□□□ -2.42
SEMA3DO95025 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.08□□□□□ -2.42
SEMA3DO95025 AC097639.2-201ENST00000603159 172 ntBASIC-0.08□□□□□ -2.42
SEMA3DO95025 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.09□□□□□ -2.42
SEMA3DO95025 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.09□□□□□ -2.42
SEMA3DO95025 SNORD28-201ENST00000384706 75 ntBASIC-0.09□□□□□ -2.42
SEMA3DO95025 RNU6-535P-201ENST00000384722 107 ntBASIC-0.09□□□□□ -2.42
SEMA3DO95025 MIR643-201ENST00000385267 97 ntBASIC-0.09□□□□□ -2.42
SEMA3DO95025 MT-TD-201ENST00000387419 68 ntBASIC-0.09□□□□□ -2.42
SEMA3DO95025 RNU6-127P-201ENST00000390897 107 ntBASIC-0.09□□□□□ -2.42
SEMA3DO95025 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.09□□□□□ -2.42
SEMA3DO95025 AC082651.2-201ENST00000496833 166 ntBASIC-0.09□□□□□ -2.42
SEMA3DO95025 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.09□□□□□ -2.42
SEMA3DO95025 SERF1AP1-201ENST00000514575 187 ntBASIC-0.09□□□□□ -2.42
SEMA3DO95025 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.09□□□□□ -2.42
SEMA3DO95025 SNORA25.16-201ENST00000516741 121 ntBASIC-0.09□□□□□ -2.42
SEMA3DO95025 RNU6-765P-201ENST00000516916 99 ntBASIC-0.09□□□□□ -2.42
SEMA3DO95025 MIR3152-201ENST00000579801 74 ntBASIC-0.09□□□□□ -2.42
SEMA3DO95025 MIR5197-201ENST00000583721 112 ntBASIC-0.09□□□□□ -2.42
SEMA3DO95025 AC091304.10-201ENST00000641554 121 ntBASIC-0.09□□□□□ -2.42
SEMA3DO95025 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.1□□□□□ -2.43
SEMA3DO95025 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.1□□□□□ -2.43
SEMA3DO95025 RNY3P5-201ENST00000384127 102 ntBASIC-0.1□□□□□ -2.43
SEMA3DO95025 MIR760-201ENST00000390220 80 ntBASIC-0.1□□□□□ -2.43
SEMA3DO95025 RNU6-651P-201ENST00000411040 105 ntBASIC-0.1□□□□□ -2.43
SEMA3DO95025 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.1□□□□□ -2.43
SEMA3DO95025 MIR4752-201ENST00000579672 72 ntBASIC-0.1□□□□□ -2.43
SEMA3DO95025 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.1□□□□□ -2.43
SEMA3DO95025 AC244669.1-204ENST00000621564 178 ntBASIC-0.1□□□□□ -2.43
SEMA3DO95025 MIR6759-201ENST00000638110 65 ntBASIC-0.1□□□□□ -2.43
SEMA3DO95025 SNORD114-31-201ENST00000363219 75 ntBASIC-0.11□□□□□ -2.43
SEMA3DO95025 RNU6-46P-201ENST00000383860 107 ntBASIC-0.11□□□□□ -2.43
SEMA3DO95025 RNU6-949P-201ENST00000384040 107 ntBASIC-0.11□□□□□ -2.43
SEMA3DO95025 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.11□□□□□ -2.43
SEMA3DO95025 SNORA18-201ENST00000384416 132 ntBASIC-0.11□□□□□ -2.43
SEMA3DO95025 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.11□□□□□ -2.43
SEMA3DO95025 SNORA20-201ENST00000384662 132 ntBASIC-0.11□□□□□ -2.43
SEMA3DO95025 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.11□□□□□ -2.43
SEMA3DO95025 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.11□□□□□ -2.43
SEMA3DO95025 RNU6-561P-201ENST00000516222 102 ntBASIC-0.11□□□□□ -2.43
SEMA3DO95025 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.11□□□□□ -2.43
SEMA3DO95025 RNU6-988P-201ENST00000519081 107 ntBASIC-0.11□□□□□ -2.43
SEMA3DO95025 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.11□□□□□ -2.43
SEMA3DO95025 MIR6841-201ENST00000637129 72 ntBASIC-0.11□□□□□ -2.43
SEMA3DO95025 MTND4P29-201ENST00000503122 1372 ntBASIC-0.11□□□□□ -2.43
SEMA3DO95025 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
SEMA3DO95025 SNORA22.1-201ENST00000362701 134 ntBASIC-0.12□□□□□ -2.43
SEMA3DO95025 SNORA32.1-201ENST00000364514 115 ntBASIC-0.12□□□□□ -2.43
SEMA3DO95025 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.12□□□□□ -2.43
SEMA3DO95025 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.12□□□□□ -2.43
SEMA3DO95025 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.12□□□□□ -2.43
SEMA3DO95025 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.12□□□□□ -2.43
SEMA3DO95025 MIR593-201ENST00000384856 100 ntBASIC-0.12□□□□□ -2.43
SEMA3DO95025 MIR610-201ENST00000385139 96 ntBASIC-0.12□□□□□ -2.43
SEMA3DO95025 MIR616-201ENST00000385293 97 ntBASIC-0.12□□□□□ -2.43
SEMA3DO95025 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.12□□□□□ -2.43
SEMA3DO95025 RNU6-135P-201ENST00000516769 101 ntBASIC-0.12□□□□□ -2.43
SEMA3DO95025 AC113195.1-201ENST00000579952 141 ntBASIC-0.12□□□□□ -2.43
SEMA3DO95025 MIR4639-201ENST00000584938 69 ntBASIC-0.12□□□□□ -2.43
SEMA3DO95025 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.12□□□□□ -2.43
SEMA3DO95025 AC021613.1-201ENST00000623880 111 ntBASIC-0.12□□□□□ -2.43
SEMA3DO95025 MIR499B-201ENST00000636498 73 ntBASIC-0.12□□□□□ -2.43
SEMA3DO95025 RNA5SP245-201ENST00000364239 121 ntBASIC-0.13□□□□□ -2.43
SEMA3DO95025 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.13□□□□□ -2.43
SEMA3DO95025 RNY1P13-201ENST00000365030 105 ntBASIC-0.13□□□□□ -2.43
SEMA3DO95025 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.13□□□□□ -2.43
SEMA3DO95025 SNORA22B-201ENST00000383876 138 ntBASIC-0.13□□□□□ -2.43
SEMA3DO95025 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.13□□□□□ -2.43
SEMA3DO95025 RNU6-848P-201ENST00000515948 107 ntBASIC-0.13□□□□□ -2.43
SEMA3DO95025 RNU6-617P-201ENST00000516147 107 ntBASIC-0.13□□□□□ -2.43
SEMA3DO95025 RNU6-473P-201ENST00000516164 107 ntBASIC-0.13□□□□□ -2.43
SEMA3DO95025 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.13□□□□□ -2.43
SEMA3DO95025 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.13□□□□□ -2.43
SEMA3DO95025 RNA5SP128-201ENST00000365305 116 ntBASIC-0.14□□□□□ -2.43
SEMA3DO95025 MIR145-201ENST00000384967 88 ntBASIC-0.14□□□□□ -2.43
SEMA3DO95025 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
SEMA3DO95025 RPL39P34-201ENST00000477141 156 ntBASIC-0.14□□□□□ -2.43
SEMA3DO95025 MIR4801-201ENST00000582704 82 ntBASIC-0.14□□□□□ -2.43
SEMA3DO95025 MIR4743-201ENST00000584576 69 ntBASIC-0.14□□□□□ -2.43
SEMA3DO95025 AL442067.1-201ENST00000613261 223 ntBASIC-0.14□□□□□ -2.43
SEMA3DO95025 MIR1295B-201ENST00000636144 60 ntBASIC-0.14□□□□□ -2.43
SEMA3DO95025 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.15□□□□□ -2.43
SEMA3DO95025 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.15□□□□□ -2.43
SEMA3DO95025 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms