Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 Y_RNA.454-201ENST00000384224 113 ntBASIC0.05□□□□□ -2.4
UPK3AO75631 SNORA20-201ENST00000384662 132 ntBASIC0.05□□□□□ -2.4
UPK3AO75631 MTATP6P23-201ENST00000440153 476 ntBASIC0.05□□□□□ -2.4
UPK3AO75631 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.05□□□□□ -2.4
UPK3AO75631 MIR5197-201ENST00000583721 112 ntBASIC0.05□□□□□ -2.4
UPK3AO75631 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.05□□□□□ -2.4
UPK3AO75631 MIR6082-201ENST00000613604 109 ntBASIC0.05□□□□□ -2.4
UPK3AO75631 MIR2909-201ENST00000617113 69 ntBASIC0.05□□□□□ -2.4
UPK3AO75631 Y_RNA.32-201ENST00000362589 110 ntBASIC0.04□□□□□ -2.4
UPK3AO75631 Y_RNA.153-201ENST00000363615 91 ntBASIC0.04□□□□□ -2.4
UPK3AO75631 Y_RNA.542-201ENST00000384641 111 ntBASIC0.04□□□□□ -2.4
UPK3AO75631 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
UPK3AO75631 SUMO1P3-201ENST00000439961 304 ntBASIC0.04□□□□□ -2.4
UPK3AO75631 AC141846.1-201ENST00000568348 142 ntBASIC0.04□□□□□ -2.4
UPK3AO75631 MIR371B-201ENST00000638082 66 ntBASIC0.04□□□□□ -2.4
UPK3AO75631 Y_RNA.68-201ENST00000362881 102 ntBASIC0.03□□□□□ -2.4
UPK3AO75631 Y_RNA.430-201ENST00000384081 110 ntBASIC0.03□□□□□ -2.4
UPK3AO75631 Y_RNA.588-201ENST00000391254 102 ntBASIC0.03□□□□□ -2.4
UPK3AO75631 Y_RNA.618-201ENST00000410949 107 ntBASIC0.03□□□□□ -2.4
UPK3AO75631 RNU6-651P-201ENST00000411040 105 ntBASIC0.03□□□□□ -2.4
UPK3AO75631 SEPT7P4-201ENST00000437076 306 ntBASIC0.03□□□□□ -2.4
UPK3AO75631 SNORA31.14-201ENST00000516728 116 ntBASIC0.03□□□□□ -2.4
UPK3AO75631 RNU7-70P-201ENST00000516941 66 ntBASIC0.03□□□□□ -2.4
UPK3AO75631 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.03□□□□□ -2.4
UPK3AO75631 MIR5190-201ENST00000581537 80 ntBASIC0.03□□□□□ -2.4
UPK3AO75631 MIR3171-201ENST00000584270 74 ntBASIC0.03□□□□□ -2.4
UPK3AO75631 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
UPK3AO75631 Y_RNA.174-201ENST00000363781 105 ntBASIC0.02□□□□□ -2.41
UPK3AO75631 RNU6-1229P-201ENST00000364295 107 ntBASIC0.02□□□□□ -2.41
UPK3AO75631 SNORA79-201ENST00000408376 140 ntBASIC0.02□□□□□ -2.41
UPK3AO75631 MTND4LP11-201ENST00000422184 280 ntBASIC0.02□□□□□ -2.41
UPK3AO75631 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.02□□□□□ -2.41
UPK3AO75631 AC069271.1-201ENST00000445577 156 ntBASIC0.02□□□□□ -2.41
UPK3AO75631 RNA5SP227-201ENST00000516184 113 ntBASIC0.02□□□□□ -2.41
UPK3AO75631 MIR4491-201ENST00000581087 68 ntBASIC0.02□□□□□ -2.41
UPK3AO75631 MIR4305-201ENST00000583252 102 ntBASIC0.02□□□□□ -2.41
UPK3AO75631 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.02□□□□□ -2.41
UPK3AO75631 MIR7107-201ENST00000611489 80 ntBASIC0.02□□□□□ -2.41
UPK3AO75631 SNORA22.1-201ENST00000362701 134 ntBASIC0.01□□□□□ -2.41
UPK3AO75631 Y_RNA.237-201ENST00000364439 102 ntBASIC0.01□□□□□ -2.41
UPK3AO75631 Y_RNA.412-201ENST00000384001 104 ntBASIC0.01□□□□□ -2.41
UPK3AO75631 Y_RNA.590-201ENST00000410140 107 ntBASIC0.01□□□□□ -2.41
UPK3AO75631 SNORD2.1-201ENST00000458762 69 ntBASIC0.01□□□□□ -2.41
UPK3AO75631 TRBVB-201ENST00000477100 408 ntBASIC0.01□□□□□ -2.41
UPK3AO75631 RNU6-561P-201ENST00000516222 102 ntBASIC0.01□□□□□ -2.41
UPK3AO75631 Y_RNA.679-201ENST00000516416 91 ntBASIC0.01□□□□□ -2.41
UPK3AO75631 RNA5SP285-201ENST00000516619 119 ntBASIC0.01□□□□□ -2.41
UPK3AO75631 SNORA9.1-201ENST00000362412 131 ntBASIC0□□□□□ -2.41
UPK3AO75631 RNA5SP214-201ENST00000363378 118 ntBASIC0□□□□□ -2.41
UPK3AO75631 Y_RNA.176-201ENST00000363815 109 ntBASIC0□□□□□ -2.41
UPK3AO75631 RNU6-728P-201ENST00000365375 104 ntBASIC0□□□□□ -2.41
UPK3AO75631 RNU6-1292P-201ENST00000383856 107 ntBASIC0□□□□□ -2.41
UPK3AO75631 Y_RNA.423-201ENST00000384057 113 ntBASIC0□□□□□ -2.41
UPK3AO75631 RNU6-135P-201ENST00000516769 101 ntBASIC0□□□□□ -2.41
UPK3AO75631 Y_RNA.697-201ENST00000516776 113 ntBASIC0□□□□□ -2.41
UPK3AO75631 RNU6-765P-201ENST00000516916 99 ntBASIC0□□□□□ -2.41
UPK3AO75631 RNU6-1137P-201ENST00000517073 99 ntBASIC0□□□□□ -2.41
UPK3AO75631 SCARNA16.5-201ENST00000517114 183 ntBASIC0□□□□□ -2.41
UPK3AO75631 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
UPK3AO75631 U2.14-201ENST00000615943 113 ntBASIC0□□□□□ -2.41
UPK3AO75631 AC021613.1-201ENST00000623880 111 ntBASIC0□□□□□ -2.41
UPK3AO75631 MIR6841-201ENST00000637129 72 ntBASIC0□□□□□ -2.41
UPK3AO75631 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.01□□□□□ -2.41
UPK3AO75631 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.01□□□□□ -2.41
UPK3AO75631 SNORA42.1-201ENST00000363515 137 ntBASIC-0.01□□□□□ -2.41
UPK3AO75631 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.01□□□□□ -2.41
UPK3AO75631 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.01□□□□□ -2.41
UPK3AO75631 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.01□□□□□ -2.41
UPK3AO75631 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.01□□□□□ -2.41
UPK3AO75631 SNORA18-201ENST00000384416 132 ntBASIC-0.01□□□□□ -2.41
UPK3AO75631 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.01□□□□□ -2.41
UPK3AO75631 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.01□□□□□ -2.41
UPK3AO75631 RNU6-291P-201ENST00000384720 107 ntBASIC-0.01□□□□□ -2.41
UPK3AO75631 RNU6-535P-201ENST00000384722 107 ntBASIC-0.01□□□□□ -2.41
UPK3AO75631 MIR329-2-201ENST00000385029 84 ntBASIC-0.01□□□□□ -2.41
UPK3AO75631 RNU6-381P-201ENST00000391259 108 ntBASIC-0.01□□□□□ -2.41
UPK3AO75631 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.01□□□□□ -2.41
UPK3AO75631 AL117351.2-201ENST00000513571 157 ntBASIC-0.01□□□□□ -2.41
UPK3AO75631 RNU7-129P-201ENST00000516128 62 ntBASIC-0.01□□□□□ -2.41
UPK3AO75631 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.01□□□□□ -2.41
UPK3AO75631 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.01□□□□□ -2.41
UPK3AO75631 AL442663.2-201ENST00000554385 511 ntBASIC-0.01□□□□□ -2.41
UPK3AO75631 MTND5P34-201ENST00000568888 325 ntBASIC-0.01□□□□□ -2.41
UPK3AO75631 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.01□□□□□ -2.41
UPK3AO75631 MIR6755-201ENST00000619993 66 ntBASIC-0.01□□□□□ -2.41
UPK3AO75631 AL365265.1-201ENST00000621045 234 ntBASIC-0.01□□□□□ -2.41
UPK3AO75631 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.01□□□□□ -2.41
UPK3AO75631 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
UPK3AO75631 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.02□□□□□ -2.41
UPK3AO75631 SNORD114-9-201ENST00000364370 72 ntBASIC-0.02□□□□□ -2.41
UPK3AO75631 RNU6-949P-201ENST00000384040 107 ntBASIC-0.02□□□□□ -2.41
UPK3AO75631 RNU6-187P-201ENST00000384139 106 ntBASIC-0.02□□□□□ -2.41
UPK3AO75631 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.02□□□□□ -2.41
UPK3AO75631 RNU6-713P-201ENST00000384761 107 ntBASIC-0.02□□□□□ -2.41
UPK3AO75631 PCNPP3-201ENST00000393579 471 ntBASIC-0.02□□□□□ -2.41
UPK3AO75631 AC096949.1-201ENST00000412047 152 ntBASIC-0.02□□□□□ -2.41
UPK3AO75631 SNORA25.16-201ENST00000516741 121 ntBASIC-0.02□□□□□ -2.41
UPK3AO75631 RNA5SP47-201ENST00000517230 109 ntBASIC-0.02□□□□□ -2.41
UPK3AO75631 AC020661.2-201ENST00000560114 134 ntBASIC-0.02□□□□□ -2.41
UPK3AO75631 AL365205.2-201ENST00000594586 68 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms