Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 MIR96-201ENST00000362288 78 ntBASIC0.58□□□□□ -2.32
SNX3O60493 Y_RNA.188-201ENST00000363952 111 ntBASIC0.58□□□□□ -2.32
SNX3O60493 Y_RNA.233-201ENST00000364407 101 ntBASIC0.58□□□□□ -2.32
SNX3O60493 RNU1-93P-201ENST00000364704 169 ntBASIC0.58□□□□□ -2.32
SNX3O60493 Y_RNA.393-201ENST00000383936 102 ntBASIC0.58□□□□□ -2.32
SNX3O60493 RNU6-364P-201ENST00000384387 107 ntBASIC0.58□□□□□ -2.32
SNX3O60493 RNU7-102P-201ENST00000458948 62 ntBASIC0.58□□□□□ -2.32
SNX3O60493 RNU7-156P-201ENST00000517214 74 ntBASIC0.58□□□□□ -2.32
SNX3O60493 Y_RNA.52-201ENST00000362760 96 ntBASIC0.57□□□□□ -2.32
SNX3O60493 RNU6-379P-201ENST00000363813 104 ntBASIC0.57□□□□□ -2.32
SNX3O60493 RNU6-1082P-201ENST00000364574 107 ntBASIC0.57□□□□□ -2.32
SNX3O60493 RNU6-312P-201ENST00000364629 107 ntBASIC0.57□□□□□ -2.32
SNX3O60493 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.57□□□□□ -2.32
SNX3O60493 RNA5SP237-201ENST00000410414 113 ntBASIC0.57□□□□□ -2.32
SNX3O60493 MIR3612-201ENST00000579753 87 ntBASIC0.57□□□□□ -2.32
SNX3O60493 Y_RNA.297-201ENST00000364950 91 ntBASIC0.56□□□□□ -2.32
SNX3O60493 Y_RNA.401-201ENST00000383965 117 ntBASIC0.56□□□□□ -2.32
SNX3O60493 RNU6-447P-201ENST00000410293 104 ntBASIC0.56□□□□□ -2.32
SNX3O60493 RNU6-1118P-201ENST00000410382 104 ntBASIC0.56□□□□□ -2.32
SNX3O60493 RNU6-1076P-201ENST00000410397 104 ntBASIC0.56□□□□□ -2.32
SNX3O60493 RNU6-355P-201ENST00000410427 104 ntBASIC0.56□□□□□ -2.32
SNX3O60493 RNU6-791P-201ENST00000410467 104 ntBASIC0.56□□□□□ -2.32
SNX3O60493 RNU6-705P-201ENST00000410601 104 ntBASIC0.56□□□□□ -2.32
SNX3O60493 RNU6-1100P-201ENST00000410691 104 ntBASIC0.56□□□□□ -2.32
SNX3O60493 RNU6-860P-201ENST00000410860 104 ntBASIC0.56□□□□□ -2.32
SNX3O60493 RNU6-1217P-201ENST00000411276 104 ntBASIC0.56□□□□□ -2.32
SNX3O60493 RNU6-785P-201ENST00000411324 104 ntBASIC0.56□□□□□ -2.32
SNX3O60493 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
SNX3O60493 Y_RNA.644-201ENST00000459006 113 ntBASIC0.56□□□□□ -2.32
SNX3O60493 AC107027.2-201ENST00000512197 115 ntBASIC0.56□□□□□ -2.32
SNX3O60493 Y_RNA.674-201ENST00000516362 113 ntBASIC0.56□□□□□ -2.32
SNX3O60493 SNORA4-201ENST00000584302 138 ntBASIC0.56□□□□□ -2.32
SNX3O60493 SNORD92-201ENST00000585078 85 ntBASIC0.56□□□□□ -2.32
SNX3O60493 AL590095.2-201ENST00000604136 117 ntBASIC0.56□□□□□ -2.32
SNX3O60493 U6.90-201ENST00000614007 104 ntBASIC0.56□□□□□ -2.32
SNX3O60493 AC141273.2-201ENST00000618989 130 ntBASIC0.56□□□□□ -2.32
SNX3O60493 U6.70-201ENST00000620287 104 ntBASIC0.56□□□□□ -2.32
SNX3O60493 AC078938.1-201ENST00000620993 318 ntBASIC0.56□□□□□ -2.32
SNX3O60493 MIR6835-201ENST00000621552 64 ntBASIC0.56□□□□□ -2.32
SNX3O60493 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
SNX3O60493 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
SNX3O60493 MIR18A-201ENST00000362310 71 ntBASIC0.55□□□□□ -2.32
SNX3O60493 SNORD93-201ENST00000408813 74 ntBASIC0.55□□□□□ -2.32
SNX3O60493 RNU6-1258P-201ENST00000516911 111 ntBASIC0.55□□□□□ -2.32
SNX3O60493 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.55□□□□□ -2.32
SNX3O60493 AC141846.1-201ENST00000568348 142 ntBASIC0.55□□□□□ -2.32
SNX3O60493 AC090897.1-201ENST00000580909 226 ntBASIC0.55□□□□□ -2.32
SNX3O60493 RNU6-945P-201ENST00000383947 107 ntBASIC0.54□□□□□ -2.32
SNX3O60493 RNY1P6-201ENST00000384193 109 ntBASIC0.54□□□□□ -2.32
SNX3O60493 Y_RNA.515-201ENST00000384535 112 ntBASIC0.54□□□□□ -2.32
SNX3O60493 RNA5SP236-201ENST00000516169 116 ntBASIC0.54□□□□□ -2.32
SNX3O60493 RNU6-388P-201ENST00000517012 105 ntBASIC0.54□□□□□ -2.32
SNX3O60493 RNU6-389P-201ENST00000517048 105 ntBASIC0.54□□□□□ -2.32
SNX3O60493 Y_RNA.757-201ENST00000578934 114 ntBASIC0.54□□□□□ -2.32
SNX3O60493 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.54□□□□□ -2.32
SNX3O60493 RNU6-349P-201ENST00000362402 107 ntBASIC0.53□□□□□ -2.32
SNX3O60493 Y_RNA.337-201ENST00000365312 102 ntBASIC0.53□□□□□ -2.32
SNX3O60493 SNORA18-201ENST00000384416 132 ntBASIC0.53□□□□□ -2.32
SNX3O60493 RNU6-342P-201ENST00000384521 104 ntBASIC0.53□□□□□ -2.32
SNX3O60493 MIR140-201ENST00000385282 100 ntBASIC0.53□□□□□ -2.32
SNX3O60493 MT-TG-201ENST00000387429 68 ntBASIC0.53□□□□□ -2.32
SNX3O60493 U8.15-201ENST00000390947 134 ntBASIC0.53□□□□□ -2.32
SNX3O60493 SNORD100-201ENST00000408573 76 ntBASIC0.53□□□□□ -2.32
SNX3O60493 RPL39P25-201ENST00000449384 154 ntBASIC0.53□□□□□ -2.32
SNX3O60493 RNU4-54P-201ENST00000516428 129 ntBASIC0.53□□□□□ -2.32
SNX3O60493 AC072026.1-201ENST00000605023 201 ntBASIC0.53□□□□□ -2.32
SNX3O60493 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
SNX3O60493 Y_RNA.171-201ENST00000363760 102 ntBASIC0.52□□□□□ -2.33
SNX3O60493 RNU6-818P-201ENST00000364837 108 ntBASIC0.52□□□□□ -2.33
SNX3O60493 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.52□□□□□ -2.33
SNX3O60493 RNU4-83P-201ENST00000410863 133 ntBASIC0.52□□□□□ -2.33
SNX3O60493 Y_RNA.793-201ENST00000411222 111 ntBASIC0.52□□□□□ -2.33
SNX3O60493 RNU6-893P-201ENST00000458841 100 ntBASIC0.52□□□□□ -2.33
SNX3O60493 AP002392.1-201ENST00000537692 208 ntBASIC0.52□□□□□ -2.33
SNX3O60493 AC004812.1-201ENST00000540773 146 ntBASIC0.52□□□□□ -2.33
SNX3O60493 MIR6844-201ENST00000637122 62 ntBASIC0.52□□□□□ -2.33
SNX3O60493 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
SNX3O60493 RNA5SP432-201ENST00000362480 116 ntBASIC0.51□□□□□ -2.33
SNX3O60493 RNU4-45P-201ENST00000365469 141 ntBASIC0.51□□□□□ -2.33
SNX3O60493 Y_RNA.357-201ENST00000365487 109 ntBASIC0.51□□□□□ -2.33
SNX3O60493 Y_RNA.552-201ENST00000384665 112 ntBASIC0.51□□□□□ -2.33
SNX3O60493 SNORA75.5-201ENST00000391291 81 ntBASIC0.51□□□□□ -2.33
SNX3O60493 RNA5SP144-201ENST00000410846 116 ntBASIC0.51□□□□□ -2.33
SNX3O60493 AC002350.1-201ENST00000490759 375 ntBASIC0.51□□□□□ -2.33
SNX3O60493 RNA5SP121-201ENST00000516537 101 ntBASIC0.51□□□□□ -2.33
SNX3O60493 AC018659.1-201ENST00000551083 169 ntBASIC0.51□□□□□ -2.33
SNX3O60493 MIR8066-201ENST00000617280 78 ntBASIC0.51□□□□□ -2.33
SNX3O60493 Y_RNA.42-201ENST00000362660 108 ntBASIC0.5□□□□□ -2.33
SNX3O60493 RNU6-200P-201ENST00000364743 107 ntBASIC0.5□□□□□ -2.33
SNX3O60493 Y_RNA.476-201ENST00000384347 108 ntBASIC0.5□□□□□ -2.33
SNX3O60493 Y_RNA.497-201ENST00000384447 98 ntBASIC0.5□□□□□ -2.33
SNX3O60493 MIR508-201ENST00000384857 115 ntBASIC0.5□□□□□ -2.33
SNX3O60493 RNU6-239P-201ENST00000390990 99 ntBASIC0.5□□□□□ -2.33
SNX3O60493 snosnR66.1-201ENST00000391095 99 ntBASIC0.5□□□□□ -2.33
SNX3O60493 MIR1276-201ENST00000408707 83 ntBASIC0.5□□□□□ -2.33
SNX3O60493 RNU6-588P-201ENST00000410281 105 ntBASIC0.5□□□□□ -2.33
SNX3O60493 RNU5E-9P-201ENST00000411164 104 ntBASIC0.5□□□□□ -2.33
SNX3O60493 RNU6-448P-201ENST00000517052 107 ntBASIC0.5□□□□□ -2.33
SNX3O60493 CYP3A137P-201ENST00000562436 69 ntBASIC0.5□□□□□ -2.33
SNX3O60493 AC133485.1-201ENST00000567176 124 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms