Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RNA5SP144-201ENST00000410846 116 ntBASIC1.05□□□□□ -2.24
ZIC3O60481 MRPL35P3-201ENST00000421557 364 ntBASIC1.05□□□□□ -2.24
ZIC3O60481 Y_RNA.692-201ENST00000516627 105 ntBASIC1.05□□□□□ -2.24
ZIC3O60481 RNA5SP404-201ENST00000517118 132 ntBASIC1.05□□□□□ -2.24
ZIC3O60481 AC106800.4-201ENST00000614905 153 ntBASIC1.05□□□□□ -2.24
ZIC3O60481 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
ZIC3O60481 RNU1-124P-201ENST00000363861 145 ntBASIC1.04□□□□□ -2.24
ZIC3O60481 Y_RNA.224-201ENST00000364308 111 ntBASIC1.04□□□□□ -2.24
ZIC3O60481 SNORD113.3-201ENST00000364630 78 ntBASIC1.04□□□□□ -2.24
ZIC3O60481 MIR618-201ENST00000385287 98 ntBASIC1.04□□□□□ -2.24
ZIC3O60481 SNORD12C-201ENST00000386307 89 ntBASIC1.04□□□□□ -2.24
ZIC3O60481 MTND4LP9-201ENST00000427694 174 ntBASIC1.04□□□□□ -2.24
ZIC3O60481 RPS23P4-201ENST00000487908 423 ntBASIC1.04□□□□□ -2.24
ZIC3O60481 RNU6-240P-201ENST00000516098 97 ntBASIC1.04□□□□□ -2.24
ZIC3O60481 RNU6-1258P-201ENST00000516911 111 ntBASIC1.04□□□□□ -2.24
ZIC3O60481 AC023827.1-201ENST00000569247 97 ntBASIC1.04□□□□□ -2.24
ZIC3O60481 Y_RNA.757-201ENST00000578934 114 ntBASIC1.04□□□□□ -2.24
ZIC3O60481 U7.2-201ENST00000607576 63 ntBASIC1.04□□□□□ -2.24
ZIC3O60481 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
ZIC3O60481 Y_RNA.280-201ENST00000364765 112 ntBASIC1.03□□□□□ -2.24
ZIC3O60481 SNORD50.2-201ENST00000365465 70 ntBASIC1.03□□□□□ -2.24
ZIC3O60481 RNU6-257P-201ENST00000410238 98 ntBASIC1.03□□□□□ -2.24
ZIC3O60481 RNU6-893P-201ENST00000458841 100 ntBASIC1.03□□□□□ -2.24
ZIC3O60481 snoU13.2-201ENST00000459201 104 ntBASIC1.03□□□□□ -2.24
ZIC3O60481 AC133485.4-201ENST00000561835 220 ntBASIC1.03□□□□□ -2.24
ZIC3O60481 AC138907.4-201ENST00000570107 226 ntBASIC1.03□□□□□ -2.24
ZIC3O60481 AC108081.1-201ENST00000604358 221 ntBASIC1.03□□□□□ -2.24
ZIC3O60481 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.03□□□□□ -2.24
ZIC3O60481 MIR6740-201ENST00000618268 113 ntBASIC1.03□□□□□ -2.24
ZIC3O60481 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.25
ZIC3O60481 Y_RNA.118-201ENST00000363300 101 ntBASIC1.02□□□□□ -2.25
ZIC3O60481 RNU6-187P-201ENST00000384139 106 ntBASIC1.02□□□□□ -2.25
ZIC3O60481 SNORA2B-201ENST00000384583 137 ntBASIC1.02□□□□□ -2.25
ZIC3O60481 SNORA40-201ENST00000388090 126 ntBASIC1.02□□□□□ -2.25
ZIC3O60481 SNORD111-201ENST00000408139 94 ntBASIC1.02□□□□□ -2.25
ZIC3O60481 MIR548M-201ENST00000408260 86 ntBASIC1.02□□□□□ -2.25
ZIC3O60481 RNU5E-3P-201ENST00000515913 68 ntBASIC1.02□□□□□ -2.25
ZIC3O60481 MIR4305-201ENST00000583252 102 ntBASIC1.02□□□□□ -2.25
ZIC3O60481 Y_RNA.114-201ENST00000363265 113 ntBASIC1.01□□□□□ -2.25
ZIC3O60481 Y_RNA.171-201ENST00000363760 102 ntBASIC1.01□□□□□ -2.25
ZIC3O60481 Y_RNA.294-201ENST00000364916 102 ntBASIC1.01□□□□□ -2.25
ZIC3O60481 Y_RNA.366-201ENST00000365540 102 ntBASIC1.01□□□□□ -2.25
ZIC3O60481 MIR588-201ENST00000384900 83 ntBASIC1.01□□□□□ -2.25
ZIC3O60481 MIR563-201ENST00000385080 79 ntBASIC1.01□□□□□ -2.25
ZIC3O60481 SUMO1P3-201ENST00000439961 304 ntBASIC1.01□□□□□ -2.25
ZIC3O60481 RNU7-62P-201ENST00000458856 62 ntBASIC1.01□□□□□ -2.25
ZIC3O60481 RN7SKP179-201ENST00000516126 217 ntBASIC1.01□□□□□ -2.25
ZIC3O60481 RNU7-40P-201ENST00000516397 64 ntBASIC1.01□□□□□ -2.25
ZIC3O60481 RNU2-35P-201ENST00000516446 142 ntBASIC1.01□□□□□ -2.25
ZIC3O60481 AC021443.1-201ENST00000604478 211 ntBASIC1.01□□□□□ -2.25
ZIC3O60481 TUG1_4.1-201ENST00000619464 181 ntBASIC1.01□□□□□ -2.25
ZIC3O60481 MIR613-201ENST00000385248 95 ntBASIC1□□□□□ -2.25
ZIC3O60481 Y_RNA.586-201ENST00000391146 98 ntBASIC1□□□□□ -2.25
ZIC3O60481 AL022718.1-201ENST00000412004 84 ntBASIC1□□□□□ -2.25
ZIC3O60481 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1□□□□□ -2.25
ZIC3O60481 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1□□□□□ -2.25
ZIC3O60481 MIR4295-201ENST00000585286 85 ntBASIC1□□□□□ -2.25
ZIC3O60481 RNU6-94P-201ENST00000607728 107 ntBASIC1□□□□□ -2.25
ZIC3O60481 uc_338.6-201ENST00000613544 171 ntBASIC1□□□□□ -2.25
ZIC3O60481 AL137067.1-201ENST00000615933 120 ntBASIC1□□□□□ -2.25
ZIC3O60481 AC012676.2-201ENST00000619258 186 ntBASIC1□□□□□ -2.25
ZIC3O60481 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
ZIC3O60481 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.99□□□□□ -2.25
ZIC3O60481 SNORD115-2-201ENST00000362842 82 ntBASIC0.99□□□□□ -2.25
ZIC3O60481 SNORD115-20-201ENST00000365099 82 ntBASIC0.99□□□□□ -2.25
ZIC3O60481 AL512326.2-201ENST00000426359 151 ntBASIC0.99□□□□□ -2.25
ZIC3O60481 AL158147.1-201ENST00000443970 75 ntBASIC0.99□□□□□ -2.25
ZIC3O60481 AC113410.1-201ENST00000505029 247 ntBASIC0.99□□□□□ -2.25
ZIC3O60481 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.99□□□□□ -2.25
ZIC3O60481 RNU6-704P-201ENST00000364162 103 ntBASIC0.98□□□□□ -2.25
ZIC3O60481 RNU6-647P-201ENST00000364243 107 ntBASIC0.98□□□□□ -2.25
ZIC3O60481 Y_RNA.298-201ENST00000364960 107 ntBASIC0.98□□□□□ -2.25
ZIC3O60481 Y_RNA.470-201ENST00000384307 117 ntBASIC0.98□□□□□ -2.25
ZIC3O60481 RNU6-1165P-201ENST00000410119 107 ntBASIC0.98□□□□□ -2.25
ZIC3O60481 RNU7-164P-201ENST00000459221 62 ntBASIC0.98□□□□□ -2.25
ZIC3O60481 RNU7-113P-201ENST00000459273 62 ntBASIC0.98□□□□□ -2.25
ZIC3O60481 snoU13.21-201ENST00000459368 105 ntBASIC0.98□□□□□ -2.25
ZIC3O60481 SNORD124-201ENST00000459577 104 ntBASIC0.98□□□□□ -2.25
ZIC3O60481 AC087343.1-201ENST00000477341 475 ntBASIC0.98□□□□□ -2.25
ZIC3O60481 IGKV1-22-201ENST00000524313 326 ntBASIC0.98□□□□□ -2.25
ZIC3O60481 AC004812.1-201ENST00000540773 146 ntBASIC0.98□□□□□ -2.25
ZIC3O60481 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
ZIC3O60481 MIR30D-201ENST00000362283 70 ntBASIC0.97□□□□□ -2.25
ZIC3O60481 Y_RNA.191-201ENST00000363972 113 ntBASIC0.97□□□□□ -2.25
ZIC3O60481 Y_RNA.508-201ENST00000384502 114 ntBASIC0.97□□□□□ -2.25
ZIC3O60481 Y_RNA.531-201ENST00000384589 121 ntBASIC0.97□□□□□ -2.25
ZIC3O60481 MIR200A-201ENST00000384875 90 ntBASIC0.97□□□□□ -2.25
ZIC3O60481 MIR1276-201ENST00000408707 83 ntBASIC0.97□□□□□ -2.25
ZIC3O60481 RNU7-123P-201ENST00000515911 60 ntBASIC0.97□□□□□ -2.25
ZIC3O60481 RN7SKP19-201ENST00000516016 252 ntBASIC0.97□□□□□ -2.25
ZIC3O60481 RNA5SP102-201ENST00000516865 106 ntBASIC0.97□□□□□ -2.25
ZIC3O60481 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
ZIC3O60481 RNU6-342P-201ENST00000384521 104 ntBASIC0.96□□□□□ -2.26
ZIC3O60481 Y_RNA.617-201ENST00000410920 90 ntBASIC0.96□□□□□ -2.26
ZIC3O60481 MIR18B-201ENST00000454574 71 ntBASIC0.96□□□□□ -2.26
ZIC3O60481 SNORD114-21-201ENST00000606412 72 ntBASIC0.96□□□□□ -2.26
ZIC3O60481 MIR6504-201ENST00000613520 61 ntBASIC0.96□□□□□ -2.26
ZIC3O60481 AL662814.1-201ENST00000617364 121 ntBASIC0.96□□□□□ -2.26
ZIC3O60481 MIR7111-201ENST00000619751 72 ntBASIC0.96□□□□□ -2.26
ZIC3O60481 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms