Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 SNORA9.3-201ENST00000516383 129 ntBASIC2.9□□□□□ -1.95
HOXA2O43364 SNORA31.15-201ENST00000516771 132 ntBASIC2.9□□□□□ -1.95
HOXA2O43364 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
HOXA2O43364 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.89□□□□□ -1.95
HOXA2O43364 RNY1P2-201ENST00000364820 117 ntBASIC2.89□□□□□ -1.95
HOXA2O43364 MIR653-201ENST00000385279 96 ntBASIC2.89□□□□□ -1.95
HOXA2O43364 RNA5SP450-201ENST00000411206 102 ntBASIC2.89□□□□□ -1.95
HOXA2O43364 MIR4529-201ENST00000578110 78 ntBASIC2.89□□□□□ -1.95
HOXA2O43364 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.89□□□□□ -1.95
HOXA2O43364 RNU6-203P-201ENST00000384038 104 ntBASIC2.88□□□□□ -1.95
HOXA2O43364 RNU6-949P-201ENST00000384040 107 ntBASIC2.88□□□□□ -1.95
HOXA2O43364 AC009474.2-201ENST00000451383 136 ntBASIC2.88□□□□□ -1.95
HOXA2O43364 SNORD111.1-201ENST00000516421 86 ntBASIC2.88□□□□□ -1.95
HOXA2O43364 RNA5SP148-201ENST00000516527 94 ntBASIC2.88□□□□□ -1.95
HOXA2O43364 RNU7-193P-201ENST00000516723 65 ntBASIC2.88□□□□□ -1.95
HOXA2O43364 MIR8066-201ENST00000617280 78 ntBASIC2.88□□□□□ -1.95
HOXA2O43364 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
HOXA2O43364 SNORD23.1-201ENST00000408212 104 ntBASIC2.87□□□□□ -1.95
HOXA2O43364 MIR1236-201ENST00000408340 102 ntBASIC2.87□□□□□ -1.95
HOXA2O43364 AC004965.1-201ENST00000413033 213 ntBASIC2.87□□□□□ -1.95
HOXA2O43364 RN7SL75P-201ENST00000461926 281 ntBASIC2.87□□□□□ -1.95
HOXA2O43364 AC140658.3-201ENST00000567603 271 ntBASIC2.87□□□□□ -1.95
HOXA2O43364 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
HOXA2O43364 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HOXA2O43364 RNA5SP133-201ENST00000363368 119 ntBASIC2.86□□□□□ -1.95
HOXA2O43364 MIR889-201ENST00000401280 79 ntBASIC2.86□□□□□ -1.95
HOXA2O43364 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.86□□□□□ -1.95
HOXA2O43364 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.86□□□□□ -1.95
HOXA2O43364 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HOXA2O43364 AC090897.1-201ENST00000580909 226 ntBASIC2.85□□□□□ -1.95
HOXA2O43364 MIR148B-201ENST00000362252 99 ntBASIC2.84□□□□□ -1.95
HOXA2O43364 Y_RNA.57-201ENST00000362806 113 ntBASIC2.84□□□□□ -1.95
HOXA2O43364 MIR194-1-201ENST00000384892 85 ntBASIC2.84□□□□□ -1.95
HOXA2O43364 AC087499.7-201ENST00000441958 109 ntBASIC2.84□□□□□ -1.95
HOXA2O43364 AP004217.1-201ENST00000480579 346 ntBASIC2.84□□□□□ -1.95
HOXA2O43364 RPS27P21-201ENST00000486977 252 ntBASIC2.84□□□□□ -1.95
HOXA2O43364 SNORA31.25-201ENST00000517242 134 ntBASIC2.84□□□□□ -1.95
HOXA2O43364 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.84□□□□□ -1.95
HOXA2O43364 AL049779.4-201ENST00000604500 156 ntBASIC2.84□□□□□ -1.95
HOXA2O43364 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
HOXA2O43364 RNU6-315P-201ENST00000362666 107 ntBASIC2.83□□□□□ -1.96
HOXA2O43364 RNA5SP259-201ENST00000365541 109 ntBASIC2.83□□□□□ -1.96
HOXA2O43364 SNORA67.4-201ENST00000384688 142 ntBASIC2.83□□□□□ -1.96
HOXA2O43364 snoU13.2-201ENST00000459201 104 ntBASIC2.83□□□□□ -1.96
HOXA2O43364 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXA2O43364 MIR4635-201ENST00000583759 79 ntBASIC2.83□□□□□ -1.96
HOXA2O43364 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.83□□□□□ -1.96
HOXA2O43364 U4.3-201ENST00000621047 82 ntBASIC2.83□□□□□ -1.96
HOXA2O43364 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.83□□□□□ -1.96
HOXA2O43364 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HOXA2O43364 SNORA70B-201ENST00000384210 135 ntBASIC2.82□□□□□ -1.96
HOXA2O43364 MIR27B-201ENST00000385129 97 ntBASIC2.82□□□□□ -1.96
HOXA2O43364 SNRPGP12-201ENST00000449481 213 ntBASIC2.82□□□□□ -1.96
HOXA2O43364 AC008413.1-201ENST00000511864 177 ntBASIC2.82□□□□□ -1.96
HOXA2O43364 RNA5SP445-201ENST00000515889 115 ntBASIC2.82□□□□□ -1.96
HOXA2O43364 MIR3124-201ENST00000582636 67 ntBASIC2.82□□□□□ -1.96
HOXA2O43364 AC104984.5-201ENST00000586878 94 ntBASIC2.82□□□□□ -1.96
HOXA2O43364 AL512598.1-201ENST00000610158 273 ntBASIC2.82□□□□□ -1.96
HOXA2O43364 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.82□□□□□ -1.96
HOXA2O43364 AC010297.1-201ENST00000623948 149 ntBASIC2.82□□□□□ -1.96
HOXA2O43364 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
HOXA2O43364 WWP1P1-201ENST00000466609 2769 ntBASIC2.81□□□□□ -1.96
HOXA2O43364 RNU4-32P-201ENST00000363404 141 ntBASIC2.81□□□□□ -1.96
HOXA2O43364 MIR513A1-201ENST00000385138 129 ntBASIC2.81□□□□□ -1.96
HOXA2O43364 RNA5SP24-201ENST00000516478 95 ntBASIC2.81□□□□□ -1.96
HOXA2O43364 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.81□□□□□ -1.96
HOXA2O43364 MIR4500-201ENST00000579472 76 ntBASIC2.81□□□□□ -1.96
HOXA2O43364 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.81□□□□□ -1.96
HOXA2O43364 AC145423.2-201ENST00000610631 239 ntBASIC2.81□□□□□ -1.96
HOXA2O43364 AC093831.2-201ENST00000624393 3427 ntBASIC2.81□□□□□ -1.96
HOXA2O43364 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HOXA2O43364 MIR588-201ENST00000384900 83 ntBASIC2.8□□□□□ -1.96
HOXA2O43364 RNU6-129P-201ENST00000391022 107 ntBASIC2.8□□□□□ -1.96
HOXA2O43364 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.8□□□□□ -1.96
HOXA2O43364 SNORD4B-201ENST00000459083 72 ntBASIC2.8□□□□□ -1.96
HOXA2O43364 AC139453.2-201ENST00000487255 133 ntBASIC2.8□□□□□ -1.96
HOXA2O43364 RNU2-19P-201ENST00000517288 84 ntBASIC2.8□□□□□ -1.96
HOXA2O43364 AC138749.4-201ENST00000563970 127 ntBASIC2.8□□□□□ -1.96
HOXA2O43364 SNORD53-201ENST00000579969 78 ntBASIC2.8□□□□□ -1.96
HOXA2O43364 AL357312.1-201ENST00000603879 298 ntBASIC2.8□□□□□ -1.96
HOXA2O43364 RNU6-571P-201ENST00000384128 107 ntBASIC2.79□□□□□ -1.96
HOXA2O43364 AC244023.1-201ENST00000426884 112 ntBASIC2.79□□□□□ -1.96
HOXA2O43364 RPS29P6-201ENST00000438196 145 ntBASIC2.79□□□□□ -1.96
HOXA2O43364 SNORA25.13-201ENST00000516395 103 ntBASIC2.79□□□□□ -1.96
HOXA2O43364 SNORA4-201ENST00000584302 138 ntBASIC2.79□□□□□ -1.96
HOXA2O43364 AC242498.1-201ENST00000604134 111 ntBASIC2.79□□□□□ -1.96
HOXA2O43364 AC067747.1-201ENST00000608026 250 ntBASIC2.79□□□□□ -1.96
HOXA2O43364 U6.109-201ENST00000636749 87 ntBASIC2.79□□□□□ -1.96
HOXA2O43364 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
HOXA2O43364 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
HOXA2O43364 RNU7-153P-201ENST00000516455 62 ntBASIC2.78□□□□□ -1.96
HOXA2O43364 RNU6-850P-201ENST00000516934 103 ntBASIC2.78□□□□□ -1.96
HOXA2O43364 PRELID3BP2-201ENST00000605362 201 ntBASIC2.78□□□□□ -1.96
HOXA2O43364 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
HOXA2O43364 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
HOXA2O43364 RNU6-396P-201ENST00000365369 105 ntBASIC2.77□□□□□ -1.97
HOXA2O43364 SNORA6-201ENST00000384033 151 ntBASIC2.77□□□□□ -1.97
HOXA2O43364 MIR1261-201ENST00000408659 82 ntBASIC2.77□□□□□ -1.97
HOXA2O43364 RNU4-83P-201ENST00000410863 133 ntBASIC2.77□□□□□ -1.97
HOXA2O43364 AC055731.1-201ENST00000474387 401 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms