Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MIRLET7C-201ENST00000362160 84 ntBASIC1.75□□□□□ -2.13
TRIM38O00635 MIR342-201ENST00000362212 99 ntBASIC1.75□□□□□ -2.13
TRIM38O00635 RNU1-78P-201ENST00000391248 165 ntBASIC1.75□□□□□ -2.13
TRIM38O00635 U8.16-201ENST00000391279 133 ntBASIC1.75□□□□□ -2.13
TRIM38O00635 MIR1912-201ENST00000410389 80 ntBASIC1.75□□□□□ -2.13
TRIM38O00635 RNA5SP225-201ENST00000410874 135 ntBASIC1.75□□□□□ -2.13
TRIM38O00635 SNX2P2-201ENST00000424553 323 ntBASIC1.75□□□□□ -2.13
TRIM38O00635 AL512326.2-201ENST00000426359 151 ntBASIC1.75□□□□□ -2.13
TRIM38O00635 RNA5SP445-201ENST00000515889 115 ntBASIC1.75□□□□□ -2.13
TRIM38O00635 RNU7-61P-201ENST00000515897 61 ntBASIC1.75□□□□□ -2.13
TRIM38O00635 RNU6-795P-201ENST00000516323 103 ntBASIC1.75□□□□□ -2.13
TRIM38O00635 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.75□□□□□ -2.13
TRIM38O00635 AL513534.2-201ENST00000603836 250 ntBASIC1.75□□□□□ -2.13
TRIM38O00635 AC012531.4-201ENST00000616509 177 ntBASIC1.75□□□□□ -2.13
TRIM38O00635 MIR8063-201ENST00000621930 81 ntBASIC1.75□□□□□ -2.13
TRIM38O00635 RNU4-36P-201ENST00000364294 144 ntBASIC1.74□□□□□ -2.13
TRIM38O00635 Y_RNA.336-201ENST00000365307 109 ntBASIC1.74□□□□□ -2.13
TRIM38O00635 Y_RNA.531-201ENST00000384589 121 ntBASIC1.74□□□□□ -2.13
TRIM38O00635 MIR577-201ENST00000385196 96 ntBASIC1.74□□□□□ -2.13
TRIM38O00635 RNU6-644P-201ENST00000391155 98 ntBASIC1.74□□□□□ -2.13
TRIM38O00635 RNU4-62P-201ENST00000410125 130 ntBASIC1.74□□□□□ -2.13
TRIM38O00635 RNA5SP144-201ENST00000410846 116 ntBASIC1.74□□□□□ -2.13
TRIM38O00635 AC087499.4-201ENST00000448505 178 ntBASIC1.74□□□□□ -2.13
TRIM38O00635 RPS23P4-201ENST00000487908 423 ntBASIC1.74□□□□□ -2.13
TRIM38O00635 AC079140.2-201ENST00000506193 142 ntBASIC1.74□□□□□ -2.13
TRIM38O00635 MIR4781-201ENST00000585250 76 ntBASIC1.74□□□□□ -2.13
TRIM38O00635 FAM71BP1-201ENST00000604431 523 ntBASIC1.74□□□□□ -2.13
TRIM38O00635 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.74□□□□□ -2.13
TRIM38O00635 AL442644.1-201ENST00000454390 3105 ntBASIC1.73□□□□□ -2.13
TRIM38O00635 Y_RNA.73-201ENST00000362910 113 ntBASIC1.73□□□□□ -2.13
TRIM38O00635 RNU6-833P-201ENST00000363486 107 ntBASIC1.73□□□□□ -2.13
TRIM38O00635 SNORD1A-201ENST00000364968 72 ntBASIC1.73□□□□□ -2.13
TRIM38O00635 Y_RNA.360-201ENST00000365512 102 ntBASIC1.73□□□□□ -2.13
TRIM38O00635 MIR605-201ENST00000385078 83 ntBASIC1.73□□□□□ -2.13
TRIM38O00635 RNU6-972P-201ENST00000391208 107 ntBASIC1.73□□□□□ -2.13
TRIM38O00635 Y_RNA.601-201ENST00000410500 113 ntBASIC1.73□□□□□ -2.13
TRIM38O00635 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.73□□□□□ -2.13
TRIM38O00635 AC027119.1-201ENST00000440877 241 ntBASIC1.73□□□□□ -2.13
TRIM38O00635 AC109327.2-201ENST00000448339 378 ntBASIC1.73□□□□□ -2.13
TRIM38O00635 RNU7-80P-201ENST00000459562 61 ntBASIC1.73□□□□□ -2.13
TRIM38O00635 AC114811.1-201ENST00000507207 168 ntBASIC1.73□□□□□ -2.13
TRIM38O00635 RNU6-162P-201ENST00000516228 103 ntBASIC1.73□□□□□ -2.13
TRIM38O00635 RNA5SP395-201ENST00000516567 118 ntBASIC1.73□□□□□ -2.13
TRIM38O00635 AC004812.1-201ENST00000540773 146 ntBASIC1.73□□□□□ -2.13
TRIM38O00635 AC091304.10-201ENST00000641554 121 ntBASIC1.73□□□□□ -2.13
TRIM38O00635 RNU6-170P-201ENST00000362832 104 ntBASIC1.72□□□□□ -2.13
TRIM38O00635 SNORD115-19-201ENST00000363098 82 ntBASIC1.72□□□□□ -2.13
TRIM38O00635 SNORD115-18-201ENST00000363293 82 ntBASIC1.72□□□□□ -2.13
TRIM38O00635 SNORD115-17-201ENST00000364612 82 ntBASIC1.72□□□□□ -2.13
TRIM38O00635 RNA5SP259-201ENST00000365541 109 ntBASIC1.72□□□□□ -2.13
TRIM38O00635 RNU6-1124P-201ENST00000384169 107 ntBASIC1.72□□□□□ -2.13
TRIM38O00635 RNU6-1065P-201ENST00000384513 106 ntBASIC1.72□□□□□ -2.13
TRIM38O00635 POLR2J4-204ENST00000418424 324 ntBASIC1.72□□□□□ -2.13
TRIM38O00635 MIR1270-201ENST00000459320 83 ntBASIC1.72□□□□□ -2.13
TRIM38O00635 RNU7-45P-201ENST00000459460 63 ntBASIC1.72□□□□□ -2.13
TRIM38O00635 AC022137.1-201ENST00000483735 151 ntBASIC1.72□□□□□ -2.13
TRIM38O00635 RNU6-1258P-201ENST00000516911 111 ntBASIC1.72□□□□□ -2.13
TRIM38O00635 MIR4285-201ENST00000581001 85 ntBASIC1.72□□□□□ -2.13
TRIM38O00635 MIR4303-201ENST00000581299 66 ntBASIC1.72□□□□□ -2.13
TRIM38O00635 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.72□□□□□ -2.13
TRIM38O00635 U7.3-201ENST00000616123 62 ntBASIC1.72□□□□□ -2.13
TRIM38O00635 RNU6-363P-201ENST00000362895 105 ntBASIC1.71□□□□□ -2.14
TRIM38O00635 RNU6-832P-201ENST00000363319 107 ntBASIC1.71□□□□□ -2.14
TRIM38O00635 Y_RNA.241-201ENST00000364470 117 ntBASIC1.71□□□□□ -2.14
TRIM38O00635 Y_RNA.454-201ENST00000384224 113 ntBASIC1.71□□□□□ -2.14
TRIM38O00635 SNORA27-201ENST00000384323 126 ntBASIC1.71□□□□□ -2.14
TRIM38O00635 AP1B1P2-201ENST00000416196 106 ntBASIC1.71□□□□□ -2.14
TRIM38O00635 AC004941.2-201ENST00000427009 228 ntBASIC1.71□□□□□ -2.14
TRIM38O00635 RNU6-998P-201ENST00000515894 101 ntBASIC1.71□□□□□ -2.14
TRIM38O00635 RNU7-12P-201ENST00000516030 62 ntBASIC1.71□□□□□ -2.14
TRIM38O00635 MIR4694-201ENST00000578534 80 ntBASIC1.71□□□□□ -2.14
TRIM38O00635 AC025521.1-201ENST00000621624 286 ntBASIC1.71□□□□□ -2.14
TRIM38O00635 AC021613.1-201ENST00000623880 111 ntBASIC1.71□□□□□ -2.14
TRIM38O00635 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
TRIM38O00635 Y_RNA.155-201ENST00000363632 101 ntBASIC1.7□□□□□ -2.14
TRIM38O00635 Y_RNA.171-201ENST00000363760 102 ntBASIC1.7□□□□□ -2.14
TRIM38O00635 RNU4-67P-201ENST00000364569 141 ntBASIC1.7□□□□□ -2.14
TRIM38O00635 Y_RNA.507-201ENST00000384500 99 ntBASIC1.7□□□□□ -2.14
TRIM38O00635 RNU6-679P-201ENST00000391003 106 ntBASIC1.7□□□□□ -2.14
TRIM38O00635 RNU6-733P-201ENST00000410759 104 ntBASIC1.7□□□□□ -2.14
TRIM38O00635 AC096949.1-201ENST00000412047 152 ntBASIC1.7□□□□□ -2.14
TRIM38O00635 AC093850.1-201ENST00000454121 251 ntBASIC1.7□□□□□ -2.14
TRIM38O00635 RNU2-13P-201ENST00000515909 113 ntBASIC1.7□□□□□ -2.14
TRIM38O00635 AC090821.2-201ENST00000523552 176 ntBASIC1.7□□□□□ -2.14
TRIM38O00635 MIR4777-201ENST00000583710 86 ntBASIC1.7□□□□□ -2.14
TRIM38O00635 MIR502-201ENST00000606349 86 ntBASIC1.7□□□□□ -2.14
TRIM38O00635 Y_RNA.226-201ENST00000364337 114 ntBASIC1.69□□□□□ -2.14
TRIM38O00635 RNA5SP363-201ENST00000365072 115 ntBASIC1.69□□□□□ -2.14
TRIM38O00635 RNU6-787P-201ENST00000384032 107 ntBASIC1.69□□□□□ -2.14
TRIM38O00635 RNU6-163P-201ENST00000384396 106 ntBASIC1.69□□□□□ -2.14
TRIM38O00635 MIR1255A-201ENST00000408338 113 ntBASIC1.69□□□□□ -2.14
TRIM38O00635 RNU6-321P-201ENST00000410912 106 ntBASIC1.69□□□□□ -2.14
TRIM38O00635 AL035398.1-201ENST00000430869 322 ntBASIC1.69□□□□□ -2.14
TRIM38O00635 RNU6-902P-201ENST00000517212 91 ntBASIC1.69□□□□□ -2.14
TRIM38O00635 RNU7-181P-201ENST00000517234 74 ntBASIC1.69□□□□□ -2.14
TRIM38O00635 MIR4778-201ENST00000577635 80 ntBASIC1.69□□□□□ -2.14
TRIM38O00635 MIR337-201ENST00000362281 93 ntBASIC1.68□□□□□ -2.14
TRIM38O00635 RNY1P1-201ENST00000364372 112 ntBASIC1.68□□□□□ -2.14
TRIM38O00635 RNU6-497P-201ENST00000365316 104 ntBASIC1.68□□□□□ -2.14
TRIM38O00635 RNU6-409P-201ENST00000384114 104 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms