Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 Y_RNA.322-201ENST00000365151 102 ntBASIC0.11□□□□□ -2.39
DDX39AO00148 Y_RNA.454-201ENST00000384224 113 ntBASIC0.11□□□□□ -2.39
DDX39AO00148 MIR644A-201ENST00000385262 94 ntBASIC0.11□□□□□ -2.39
DDX39AO00148 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
DDX39AO00148 Y_RNA.650-201ENST00000459002 102 ntBASIC0.11□□□□□ -2.39
DDX39AO00148 Y_RNA.777-201ENST00000516982 102 ntBASIC0.11□□□□□ -2.39
DDX39AO00148 Y_RNA.771-201ENST00000598668 102 ntBASIC0.11□□□□□ -2.39
DDX39AO00148 U2.14-201ENST00000615943 113 ntBASIC0.11□□□□□ -2.39
DDX39AO00148 MIR2909-201ENST00000617113 69 ntBASIC0.11□□□□□ -2.39
DDX39AO00148 Y_RNA.789-201ENST00000622480 102 ntBASIC0.11□□□□□ -2.39
DDX39AO00148 MIR4315-1-201ENST00000636800 73 ntBASIC0.11□□□□□ -2.39
DDX39AO00148 MIR4315-2-201ENST00000640925 73 ntBASIC0.11□□□□□ -2.39
DDX39AO00148 AL596211.1-201ENST00000569873 2277 ntBASIC0.1□□□□□ -2.39
DDX39AO00148 RNA5SP257-201ENST00000363023 116 ntBASIC0.1□□□□□ -2.39
DDX39AO00148 Y_RNA.202-201ENST00000364083 110 ntBASIC0.1□□□□□ -2.39
DDX39AO00148 RNU6-815P-201ENST00000384080 113 ntBASIC0.1□□□□□ -2.39
DDX39AO00148 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
DDX39AO00148 U8.15-201ENST00000390947 134 ntBASIC0.1□□□□□ -2.39
DDX39AO00148 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
DDX39AO00148 RNU6-985P-201ENST00000410182 104 ntBASIC0.1□□□□□ -2.39
DDX39AO00148 Y_RNA.618-201ENST00000410949 107 ntBASIC0.1□□□□□ -2.39
DDX39AO00148 AL512326.2-201ENST00000426359 151 ntBASIC0.1□□□□□ -2.39
DDX39AO00148 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.1□□□□□ -2.39
DDX39AO00148 TRBVB-201ENST00000477100 408 ntBASIC0.1□□□□□ -2.39
DDX39AO00148 RNU6-561P-201ENST00000516222 102 ntBASIC0.1□□□□□ -2.39
DDX39AO00148 AC069113.3-201ENST00000521019 150 ntBASIC0.1□□□□□ -2.39
DDX39AO00148 MIR4768-201ENST00000585270 74 ntBASIC0.1□□□□□ -2.39
DDX39AO00148 MIR6082-201ENST00000613604 109 ntBASIC0.1□□□□□ -2.39
DDX39AO00148 RNU6-403P-201ENST00000363163 104 ntBASIC0.09□□□□□ -2.4
DDX39AO00148 RNU6-1292P-201ENST00000383856 107 ntBASIC0.09□□□□□ -2.4
DDX39AO00148 Y_RNA.588-201ENST00000391254 102 ntBASIC0.09□□□□□ -2.4
DDX39AO00148 RNU6-381P-201ENST00000391259 108 ntBASIC0.09□□□□□ -2.4
DDX39AO00148 AC141846.1-201ENST00000568348 142 ntBASIC0.09□□□□□ -2.4
DDX39AO00148 MIR3152-201ENST00000579801 74 ntBASIC0.09□□□□□ -2.4
DDX39AO00148 AL365265.1-201ENST00000621045 234 ntBASIC0.09□□□□□ -2.4
DDX39AO00148 MIR6841-201ENST00000637129 72 ntBASIC0.09□□□□□ -2.4
DDX39AO00148 Y_RNA.32-201ENST00000362589 110 ntBASIC0.08□□□□□ -2.4
DDX39AO00148 Y_RNA.176-201ENST00000363815 109 ntBASIC0.08□□□□□ -2.4
DDX39AO00148 RNU6-867P-201ENST00000364956 107 ntBASIC0.08□□□□□ -2.4
DDX39AO00148 SNORA20-201ENST00000384662 132 ntBASIC0.08□□□□□ -2.4
DDX39AO00148 Y_RNA.590-201ENST00000410140 107 ntBASIC0.08□□□□□ -2.4
DDX39AO00148 RNU2-59P-201ENST00000410482 191 ntBASIC0.08□□□□□ -2.4
DDX39AO00148 AC096949.1-201ENST00000412047 152 ntBASIC0.08□□□□□ -2.4
DDX39AO00148 RNA5SP268-201ENST00000516828 124 ntBASIC0.08□□□□□ -2.4
DDX39AO00148 RNU6-765P-201ENST00000516916 99 ntBASIC0.08□□□□□ -2.4
DDX39AO00148 AL442663.2-201ENST00000554385 511 ntBASIC0.08□□□□□ -2.4
DDX39AO00148 AC112693.2-201ENST00000556538 232 ntBASIC0.08□□□□□ -2.4
DDX39AO00148 AL365205.2-201ENST00000594586 68 ntBASIC0.08□□□□□ -2.4
DDX39AO00148 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.08□□□□□ -2.4
DDX39AO00148 MIR371B-201ENST00000638082 66 ntBASIC0.08□□□□□ -2.4
DDX39AO00148 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
DDX39AO00148 RNU6-1109P-201ENST00000391187 107 ntBASIC0.07□□□□□ -2.4
DDX39AO00148 SNORA79-201ENST00000408376 140 ntBASIC0.07□□□□□ -2.4
DDX39AO00148 SEPT7P4-201ENST00000437076 306 ntBASIC0.07□□□□□ -2.4
DDX39AO00148 Y_RNA.679-201ENST00000516416 91 ntBASIC0.07□□□□□ -2.4
DDX39AO00148 MIR4491-201ENST00000581087 68 ntBASIC0.07□□□□□ -2.4
DDX39AO00148 MIR4282-201ENST00000583613 67 ntBASIC0.07□□□□□ -2.4
DDX39AO00148 AL356055.1-201ENST00000602528 446 ntBASIC0.07□□□□□ -2.4
DDX39AO00148 AC021613.1-201ENST00000623880 111 ntBASIC0.07□□□□□ -2.4
DDX39AO00148 SNORA22.1-201ENST00000362701 134 ntBASIC0.06□□□□□ -2.4
DDX39AO00148 Y_RNA.280-201ENST00000364765 112 ntBASIC0.06□□□□□ -2.4
DDX39AO00148 RNU6-728P-201ENST00000365375 104 ntBASIC0.06□□□□□ -2.4
DDX39AO00148 SNORA33.2-201ENST00000365413 134 ntBASIC0.06□□□□□ -2.4
DDX39AO00148 Y_RNA.416-201ENST00000384014 113 ntBASIC0.06□□□□□ -2.4
DDX39AO00148 SNORA31.14-201ENST00000516728 116 ntBASIC0.06□□□□□ -2.4
DDX39AO00148 MIR335-201ENST00000362173 94 ntBASIC0.05□□□□□ -2.4
DDX39AO00148 Y_RNA.174-201ENST00000363781 105 ntBASIC0.05□□□□□ -2.4
DDX39AO00148 RNU4-17P-201ENST00000365598 141 ntBASIC0.05□□□□□ -2.4
DDX39AO00148 RNU6-949P-201ENST00000384040 107 ntBASIC0.05□□□□□ -2.4
DDX39AO00148 RNU6-639P-201ENST00000384074 107 ntBASIC0.05□□□□□ -2.4
DDX39AO00148 SNORA72.6-201ENST00000384520 129 ntBASIC0.05□□□□□ -2.4
DDX39AO00148 RNU6-713P-201ENST00000384761 107 ntBASIC0.05□□□□□ -2.4
DDX39AO00148 RNU4-43P-201ENST00000410628 137 ntBASIC0.05□□□□□ -2.4
DDX39AO00148 MIR7107-201ENST00000611489 80 ntBASIC0.05□□□□□ -2.4
DDX39AO00148 AL442067.1-201ENST00000613261 223 ntBASIC0.05□□□□□ -2.4
DDX39AO00148 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.04□□□□□ -2.4
DDX39AO00148 Y_RNA.512-201ENST00000384518 102 ntBASIC0.04□□□□□ -2.4
DDX39AO00148 SUMO1P3-201ENST00000439961 304 ntBASIC0.04□□□□□ -2.4
DDX39AO00148 MTCYBP6-201ENST00000441810 138 ntBASIC0.04□□□□□ -2.4
DDX39AO00148 AC069271.1-201ENST00000445577 156 ntBASIC0.04□□□□□ -2.4
DDX39AO00148 RNU6-135P-201ENST00000516769 101 ntBASIC0.04□□□□□ -2.4
DDX39AO00148 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.04□□□□□ -2.4
DDX39AO00148 MIR4305-201ENST00000583252 102 ntBASIC0.04□□□□□ -2.4
DDX39AO00148 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.04□□□□□ -2.4
DDX39AO00148 MIR6828-201ENST00000636181 60 ntBASIC0.04□□□□□ -2.4
DDX39AO00148 Y_RNA.30-201ENST00000362572 97 ntBASIC0.03□□□□□ -2.4
DDX39AO00148 SNORA42.1-201ENST00000363515 137 ntBASIC0.03□□□□□ -2.4
DDX39AO00148 SNORA18-201ENST00000384416 132 ntBASIC0.03□□□□□ -2.4
DDX39AO00148 Y_RNA.536-201ENST00000384621 113 ntBASIC0.03□□□□□ -2.4
DDX39AO00148 RNU6-291P-201ENST00000384720 107 ntBASIC0.03□□□□□ -2.4
DDX39AO00148 RNU7-70P-201ENST00000516941 66 ntBASIC0.03□□□□□ -2.4
DDX39AO00148 SCARNA16.5-201ENST00000517114 183 ntBASIC0.03□□□□□ -2.4
DDX39AO00148 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
DDX39AO00148 MIR6755-201ENST00000619993 66 ntBASIC0.03□□□□□ -2.4
DDX39AO00148 RNU6-103P-201ENST00000363686 107 ntBASIC0.02□□□□□ -2.41
DDX39AO00148 RNU6-1229P-201ENST00000364295 107 ntBASIC0.02□□□□□ -2.41
DDX39AO00148 RNU6-978P-201ENST00000364371 103 ntBASIC0.02□□□□□ -2.41
DDX39AO00148 Y_RNA.539-201ENST00000384635 107 ntBASIC0.02□□□□□ -2.41
DDX39AO00148 RNA5SP227-201ENST00000516184 113 ntBASIC0.02□□□□□ -2.41
DDX39AO00148 SNORD116-25-201ENST00000516517 92 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms