Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 SNORD111.1-201ENST00000516421 86 ntBASIC1.58□□□□□ -2.16
SSX2IPQ9Y2D8 MIR3937-201ENST00000580135 106 ntBASIC1.58□□□□□ -2.16
SSX2IPQ9Y2D8 MIR4422-201ENST00000581938 83 ntBASIC1.58□□□□□ -2.16
SSX2IPQ9Y2D8 RNU6-349P-201ENST00000362402 107 ntBASIC1.57□□□□□ -2.16
SSX2IPQ9Y2D8 Y_RNA.71-201ENST00000362892 104 ntBASIC1.57□□□□□ -2.16
SSX2IPQ9Y2D8 Y_RNA.294-201ENST00000364916 102 ntBASIC1.57□□□□□ -2.16
SSX2IPQ9Y2D8 RNU6-22P-201ENST00000384355 107 ntBASIC1.57□□□□□ -2.16
SSX2IPQ9Y2D8 MIR1304-201ENST00000408243 91 ntBASIC1.57□□□□□ -2.16
SSX2IPQ9Y2D8 RNA5SP261-201ENST00000410536 106 ntBASIC1.57□□□□□ -2.16
SSX2IPQ9Y2D8 AC027119.1-201ENST00000440877 241 ntBASIC1.57□□□□□ -2.16
SSX2IPQ9Y2D8 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.57□□□□□ -2.16
SSX2IPQ9Y2D8 RPL30P7-201ENST00000479312 323 ntBASIC1.57□□□□□ -2.16
SSX2IPQ9Y2D8 RN7SKP179-201ENST00000516126 217 ntBASIC1.57□□□□□ -2.16
SSX2IPQ9Y2D8 AL157834.3-201ENST00000615543 103 ntBASIC1.57□□□□□ -2.16
SSX2IPQ9Y2D8 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SSX2IPQ9Y2D8 Y_RNA.218-201ENST00000364218 104 ntBASIC1.56□□□□□ -2.16
SSX2IPQ9Y2D8 RNU6-690P-201ENST00000365242 106 ntBASIC1.56□□□□□ -2.16
SSX2IPQ9Y2D8 SNORD116-14-201ENST00000383894 92 ntBASIC1.56□□□□□ -2.16
SSX2IPQ9Y2D8 SNORD116-17-201ENST00000383929 92 ntBASIC1.56□□□□□ -2.16
SSX2IPQ9Y2D8 SNORD116-15-201ENST00000384445 92 ntBASIC1.56□□□□□ -2.16
SSX2IPQ9Y2D8 SNORD116-19-201ENST00000384729 92 ntBASIC1.56□□□□□ -2.16
SSX2IPQ9Y2D8 MIR1323-201ENST00000408090 73 ntBASIC1.56□□□□□ -2.16
SSX2IPQ9Y2D8 AL354695.1-201ENST00000427935 228 ntBASIC1.56□□□□□ -2.16
SSX2IPQ9Y2D8 RPL39P39-201ENST00000455840 151 ntBASIC1.56□□□□□ -2.16
SSX2IPQ9Y2D8 RPS29P23-201ENST00000458635 123 ntBASIC1.56□□□□□ -2.16
SSX2IPQ9Y2D8 AC019176.1-201ENST00000518519 225 ntBASIC1.56□□□□□ -2.16
SSX2IPQ9Y2D8 MIR3152-201ENST00000579801 74 ntBASIC1.56□□□□□ -2.16
SSX2IPQ9Y2D8 RNU6-235P-201ENST00000362644 107 ntBASIC1.55□□□□□ -2.16
SSX2IPQ9Y2D8 Y_RNA.127-201ENST00000363386 109 ntBASIC1.55□□□□□ -2.16
SSX2IPQ9Y2D8 RNU6-479P-201ENST00000516348 105 ntBASIC1.55□□□□□ -2.16
SSX2IPQ9Y2D8 RNU6-1234P-201ENST00000516877 103 ntBASIC1.55□□□□□ -2.16
SSX2IPQ9Y2D8 AC133485.4-201ENST00000561835 220 ntBASIC1.55□□□□□ -2.16
SSX2IPQ9Y2D8 AC138907.4-201ENST00000570107 226 ntBASIC1.55□□□□□ -2.16
SSX2IPQ9Y2D8 AL353770.2-201ENST00000620024 78 ntBASIC1.55□□□□□ -2.16
SSX2IPQ9Y2D8 MIR4251-201ENST00000635819 61 ntBASIC1.55□□□□□ -2.16
SSX2IPQ9Y2D8 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
SSX2IPQ9Y2D8 RNA5SP48-201ENST00000363969 126 ntBASIC1.54□□□□□ -2.16
SSX2IPQ9Y2D8 RNU6-1081P-201ENST00000384537 107 ntBASIC1.54□□□□□ -2.16
SSX2IPQ9Y2D8 MIR320A-201ENST00000385302 82 ntBASIC1.54□□□□□ -2.16
SSX2IPQ9Y2D8 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.54□□□□□ -2.16
SSX2IPQ9Y2D8 MIR548I2-201ENST00000408348 149 ntBASIC1.54□□□□□ -2.16
SSX2IPQ9Y2D8 Y_RNA.617-201ENST00000410920 90 ntBASIC1.54□□□□□ -2.16
SSX2IPQ9Y2D8 RNU7-41P-201ENST00000515917 61 ntBASIC1.54□□□□□ -2.16
SSX2IPQ9Y2D8 RN7SKP19-201ENST00000516016 252 ntBASIC1.54□□□□□ -2.16
SSX2IPQ9Y2D8 AL137067.1-201ENST00000615933 120 ntBASIC1.54□□□□□ -2.16
SSX2IPQ9Y2D8 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SSX2IPQ9Y2D8 RNU6-1168P-201ENST00000390831 104 ntBASIC1.53□□□□□ -2.16
SSX2IPQ9Y2D8 RNU6-1319P-201ENST00000390855 104 ntBASIC1.53□□□□□ -2.16
SSX2IPQ9Y2D8 RNU6-747P-201ENST00000390928 104 ntBASIC1.53□□□□□ -2.16
SSX2IPQ9Y2D8 RNU6-241P-201ENST00000391148 104 ntBASIC1.53□□□□□ -2.16
SSX2IPQ9Y2D8 RNU6-177P-201ENST00000411257 104 ntBASIC1.53□□□□□ -2.16
SSX2IPQ9Y2D8 RNU6-893P-201ENST00000458841 100 ntBASIC1.53□□□□□ -2.16
SSX2IPQ9Y2D8 RNU6-240P-201ENST00000516098 97 ntBASIC1.53□□□□□ -2.16
SSX2IPQ9Y2D8 RNU6-1333P-201ENST00000516162 93 ntBASIC1.53□□□□□ -2.16
SSX2IPQ9Y2D8 RNU6-947P-201ENST00000516264 106 ntBASIC1.53□□□□□ -2.16
SSX2IPQ9Y2D8 RNU6-313P-201ENST00000516317 112 ntBASIC1.53□□□□□ -2.16
SSX2IPQ9Y2D8 MIR3664-201ENST00000579074 99 ntBASIC1.53□□□□□ -2.16
SSX2IPQ9Y2D8 MIR548AI-201ENST00000579940 88 ntBASIC1.53□□□□□ -2.16
SSX2IPQ9Y2D8 MIR7974-201ENST00000615835 79 ntBASIC1.53□□□□□ -2.16
SSX2IPQ9Y2D8 AC021613.1-201ENST00000623880 111 ntBASIC1.53□□□□□ -2.16
SSX2IPQ9Y2D8 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
SSX2IPQ9Y2D8 Y_RNA.191-201ENST00000363972 113 ntBASIC1.52□□□□□ -2.17
SSX2IPQ9Y2D8 Y_RNA.366-201ENST00000365540 102 ntBASIC1.52□□□□□ -2.17
SSX2IPQ9Y2D8 RNU6-42P-201ENST00000384165 107 ntBASIC1.52□□□□□ -2.17
SSX2IPQ9Y2D8 RNU6-913P-201ENST00000390913 95 ntBASIC1.52□□□□□ -2.17
SSX2IPQ9Y2D8 RNU6-1154P-201ENST00000391001 104 ntBASIC1.52□□□□□ -2.17
SSX2IPQ9Y2D8 RNU2-51P-201ENST00000410708 197 ntBASIC1.52□□□□□ -2.17
SSX2IPQ9Y2D8 RNU6-659P-201ENST00000516454 104 ntBASIC1.52□□□□□ -2.17
SSX2IPQ9Y2D8 AC108081.1-201ENST00000604358 221 ntBASIC1.52□□□□□ -2.17
SSX2IPQ9Y2D8 AC021443.1-201ENST00000604478 211 ntBASIC1.52□□□□□ -2.17
SSX2IPQ9Y2D8 AL020996.3-201ENST00000606617 222 ntBASIC1.52□□□□□ -2.17
SSX2IPQ9Y2D8 AL096861.1-201ENST00000610899 123 ntBASIC1.52□□□□□ -2.17
SSX2IPQ9Y2D8 AL365222.1-201ENST00000614661 98 ntBASIC1.52□□□□□ -2.17
SSX2IPQ9Y2D8 MIR150-201ENST00000385048 84 ntBASIC1.51□□□□□ -2.17
SSX2IPQ9Y2D8 RNU7-107P-201ENST00000459121 61 ntBASIC1.51□□□□□ -2.17
SSX2IPQ9Y2D8 AL133373.1-201ENST00000497098 94 ntBASIC1.51□□□□□ -2.17
SSX2IPQ9Y2D8 SNORA31.4-201ENST00000516049 129 ntBASIC1.51□□□□□ -2.17
SSX2IPQ9Y2D8 RNU6-1061P-201ENST00000516530 99 ntBASIC1.51□□□□□ -2.17
SSX2IPQ9Y2D8 AL512310.8-201ENST00000550183 120 ntBASIC1.51□□□□□ -2.17
SSX2IPQ9Y2D8 MIR4452-201ENST00000583004 71 ntBASIC1.51□□□□□ -2.17
SSX2IPQ9Y2D8 MIR3192-201ENST00000584920 77 ntBASIC1.51□□□□□ -2.17
SSX2IPQ9Y2D8 MIR8055-201ENST00000610739 97 ntBASIC1.51□□□□□ -2.17
SSX2IPQ9Y2D8 MIR6078-201ENST00000611069 100 ntBASIC1.51□□□□□ -2.17
SSX2IPQ9Y2D8 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.51□□□□□ -2.17
SSX2IPQ9Y2D8 RNA5SP136-201ENST00000410906 107 ntBASIC1.5□□□□□ -2.17
SSX2IPQ9Y2D8 RNU6-772P-201ENST00000516042 105 ntBASIC1.5□□□□□ -2.17
SSX2IPQ9Y2D8 Y_RNA.712-201ENST00000517011 92 ntBASIC1.5□□□□□ -2.17
SSX2IPQ9Y2D8 RNU6-902P-201ENST00000517212 91 ntBASIC1.5□□□□□ -2.17
SSX2IPQ9Y2D8 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.5□□□□□ -2.17
SSX2IPQ9Y2D8 MIR4305-201ENST00000583252 102 ntBASIC1.5□□□□□ -2.17
SSX2IPQ9Y2D8 HSPE1P19-201ENST00000603327 295 ntBASIC1.5□□□□□ -2.17
SSX2IPQ9Y2D8 AL078603.1-201ENST00000603824 313 ntBASIC1.5□□□□□ -2.17
SSX2IPQ9Y2D8 AL121890.5-201ENST00000620848 304 ntBASIC1.5□□□□□ -2.17
SSX2IPQ9Y2D8 MIR6717-201ENST00000622747 73 ntBASIC1.5□□□□□ -2.17
SSX2IPQ9Y2D8 SNORA1.1-201ENST00000364671 133 ntBASIC1.49□□□□□ -2.17
SSX2IPQ9Y2D8 RNU4-16P-201ENST00000364737 141 ntBASIC1.49□□□□□ -2.17
SSX2IPQ9Y2D8 SNORD58C-201ENST00000365223 64 ntBASIC1.49□□□□□ -2.17
SSX2IPQ9Y2D8 Y_RNA.430-201ENST00000384081 110 ntBASIC1.49□□□□□ -2.17
SSX2IPQ9Y2D8 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
SSX2IPQ9Y2D8 SNORA26.6-201ENST00000391256 115 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 207.9 ms