Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 SNORA8.1-201ENST00000384250 140 ntBASIC3.39□□□□□ -1.87
PDZRN3Q9UPQ7 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
PDZRN3Q9UPQ7 RNU4-83P-201ENST00000410863 133 ntBASIC3.39□□□□□ -1.87
PDZRN3Q9UPQ7 RNU6-602P-201ENST00000411155 105 ntBASIC3.39□□□□□ -1.87
PDZRN3Q9UPQ7 AL606517.2-201ENST00000442855 241 ntBASIC3.39□□□□□ -1.87
PDZRN3Q9UPQ7 AC024995.1-201ENST00000523014 93 ntBASIC3.39□□□□□ -1.87
PDZRN3Q9UPQ7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PDZRN3Q9UPQ7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PDZRN3Q9UPQ7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PDZRN3Q9UPQ7 Y_RNA.12-201ENST00000362393 112 ntBASIC3.38□□□□□ -1.87
PDZRN3Q9UPQ7 Y_RNA.236-201ENST00000364427 111 ntBASIC3.38□□□□□ -1.87
PDZRN3Q9UPQ7 SNORA1.2-201ENST00000365189 134 ntBASIC3.38□□□□□ -1.87
PDZRN3Q9UPQ7 MIR592-201ENST00000384959 97 ntBASIC3.38□□□□□ -1.87
PDZRN3Q9UPQ7 SRIP3-201ENST00000413200 219 ntBASIC3.38□□□□□ -1.87
PDZRN3Q9UPQ7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.38□□□□□ -1.87
PDZRN3Q9UPQ7 HMGN1P33-201ENST00000432945 451 ntBASIC3.38□□□□□ -1.87
PDZRN3Q9UPQ7 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.38□□□□□ -1.87
PDZRN3Q9UPQ7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.38□□□□□ -1.87
PDZRN3Q9UPQ7 AC007336.1-201ENST00000576365 3828 ntBASIC3.38□□□□□ -1.87
PDZRN3Q9UPQ7 AC027279.3-201ENST00000625055 122 ntBASIC3.38□□□□□ -1.87
PDZRN3Q9UPQ7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
PDZRN3Q9UPQ7 Y_RNA.36-201ENST00000362602 112 ntBASIC3.37□□□□□ -1.87
PDZRN3Q9UPQ7 U8.2-201ENST00000363156 134 ntBASIC3.37□□□□□ -1.87
PDZRN3Q9UPQ7 RNU6-829P-201ENST00000363700 112 ntBASIC3.37□□□□□ -1.87
PDZRN3Q9UPQ7 RNU6-160P-201ENST00000384591 107 ntBASIC3.37□□□□□ -1.87
PDZRN3Q9UPQ7 AC005908.1-201ENST00000468701 347 ntBASIC3.37□□□□□ -1.87
PDZRN3Q9UPQ7 RN7SL499P-201ENST00000481141 276 ntBASIC3.37□□□□□ -1.87
PDZRN3Q9UPQ7 MIR4524B-201ENST00000581569 115 ntBASIC3.37□□□□□ -1.87
PDZRN3Q9UPQ7 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC3.37□□□□□ -1.87
PDZRN3Q9UPQ7 AC103706.3-201ENST00000636297 85 ntBASIC3.37□□□□□ -1.87
PDZRN3Q9UPQ7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PDZRN3Q9UPQ7 RNU1-109P-201ENST00000383960 147 ntBASIC3.36□□□□□ -1.87
PDZRN3Q9UPQ7 MIR942-201ENST00000401111 86 ntBASIC3.36□□□□□ -1.87
PDZRN3Q9UPQ7 SNORA3.2-201ENST00000408221 125 ntBASIC3.36□□□□□ -1.87
PDZRN3Q9UPQ7 AC015818.7-201ENST00000428754 109 ntBASIC3.36□□□□□ -1.87
PDZRN3Q9UPQ7 AC092427.1-202ENST00000430569 476 ntBASIC3.36□□□□□ -1.87
PDZRN3Q9UPQ7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PDZRN3Q9UPQ7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
PDZRN3Q9UPQ7 RNU6-132P-201ENST00000383863 107 ntBASIC3.35□□□□□ -1.87
PDZRN3Q9UPQ7 MIR515-2-201ENST00000384883 83 ntBASIC3.35□□□□□ -1.87
PDZRN3Q9UPQ7 MIR515-1-201ENST00000384884 83 ntBASIC3.35□□□□□ -1.87
PDZRN3Q9UPQ7 MIR1262-201ENST00000408276 93 ntBASIC3.35□□□□□ -1.87
PDZRN3Q9UPQ7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.35□□□□□ -1.87
PDZRN3Q9UPQ7 YWHAEP2-201ENST00000580066 112 ntBASIC3.35□□□□□ -1.87
PDZRN3Q9UPQ7 MIR3064-201ENST00000581130 66 ntBASIC3.35□□□□□ -1.87
PDZRN3Q9UPQ7 YWHAEP3-201ENST00000582767 121 ntBASIC3.35□□□□□ -1.87
PDZRN3Q9UPQ7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.35□□□□□ -1.87
PDZRN3Q9UPQ7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.35□□□□□ -1.87
PDZRN3Q9UPQ7 AC245060.5-201ENST00000610778 3293 ntBASIC3.34□□□□□ -1.87
PDZRN3Q9UPQ7 RNU6-681P-201ENST00000364012 104 ntBASIC3.34□□□□□ -1.87
PDZRN3Q9UPQ7 SNORD90-201ENST00000391145 111 ntBASIC3.34□□□□□ -1.87
PDZRN3Q9UPQ7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.34□□□□□ -1.87
PDZRN3Q9UPQ7 AC245047.3-201ENST00000429428 127 ntBASIC3.34□□□□□ -1.87
PDZRN3Q9UPQ7 AC104996.3-201ENST00000590718 94 ntBASIC3.34□□□□□ -1.87
PDZRN3Q9UPQ7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.34□□□□□ -1.87
PDZRN3Q9UPQ7 MIR8065-201ENST00000620577 100 ntBASIC3.34□□□□□ -1.87
PDZRN3Q9UPQ7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.33□□□□□ -1.88
PDZRN3Q9UPQ7 RNU6-154P-201ENST00000384306 106 ntBASIC3.33□□□□□ -1.88
PDZRN3Q9UPQ7 RNU2-48P-201ENST00000410694 191 ntBASIC3.33□□□□□ -1.88
PDZRN3Q9UPQ7 STAG3L5P-204ENST00000443759 179 ntBASIC3.33□□□□□ -1.88
PDZRN3Q9UPQ7 MIR4769-201ENST00000584126 77 ntBASIC3.33□□□□□ -1.88
PDZRN3Q9UPQ7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.33□□□□□ -1.88
PDZRN3Q9UPQ7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PDZRN3Q9UPQ7 SNORA68.1-201ENST00000364537 132 ntBASIC3.32□□□□□ -1.88
PDZRN3Q9UPQ7 RNA5SP210-201ENST00000391034 120 ntBASIC3.32□□□□□ -1.88
PDZRN3Q9UPQ7 SNRPGP12-201ENST00000449481 213 ntBASIC3.32□□□□□ -1.88
PDZRN3Q9UPQ7 SCARNA11.3-201ENST00000517276 130 ntBASIC3.32□□□□□ -1.88
PDZRN3Q9UPQ7 MIR4536-1-201ENST00000583537 88 ntBASIC3.32□□□□□ -1.88
PDZRN3Q9UPQ7 MIR4635-201ENST00000583759 79 ntBASIC3.32□□□□□ -1.88
PDZRN3Q9UPQ7 MIR3616-201ENST00000584070 92 ntBASIC3.32□□□□□ -1.88
PDZRN3Q9UPQ7 AC243994.1-201ENST00000618627 109 ntBASIC3.32□□□□□ -1.88
PDZRN3Q9UPQ7 RNU1-23P-201ENST00000363361 144 ntBASIC3.31□□□□□ -1.88
PDZRN3Q9UPQ7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PDZRN3Q9UPQ7 RNA5SP425-201ENST00000410336 112 ntBASIC3.31□□□□□ -1.88
PDZRN3Q9UPQ7 CST2P1-201ENST00000425770 87 ntBASIC3.31□□□□□ -1.88
PDZRN3Q9UPQ7 AL161788.1-201ENST00000441805 169 ntBASIC3.31□□□□□ -1.88
PDZRN3Q9UPQ7 HSPE1P24-201ENST00000450782 238 ntBASIC3.31□□□□□ -1.88
PDZRN3Q9UPQ7 AC023790.1-201ENST00000482174 347 ntBASIC3.31□□□□□ -1.88
PDZRN3Q9UPQ7 RPS29P11-201ENST00000496507 171 ntBASIC3.31□□□□□ -1.88
PDZRN3Q9UPQ7 RNU6-75P-201ENST00000515944 104 ntBASIC3.31□□□□□ -1.88
PDZRN3Q9UPQ7 RNU4ATAC9P-201ENST00000517146 126 ntBASIC3.31□□□□□ -1.88
PDZRN3Q9UPQ7 MIR8055-201ENST00000610739 97 ntBASIC3.31□□□□□ -1.88
PDZRN3Q9UPQ7 U4.3-201ENST00000621047 82 ntBASIC3.31□□□□□ -1.88
PDZRN3Q9UPQ7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDZRN3Q9UPQ7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDZRN3Q9UPQ7 MIR337-201ENST00000362281 93 ntBASIC3.3□□□□□ -1.88
PDZRN3Q9UPQ7 SNORA38-201ENST00000363946 132 ntBASIC3.3□□□□□ -1.88
PDZRN3Q9UPQ7 RNU6-895P-201ENST00000384125 103 ntBASIC3.3□□□□□ -1.88
PDZRN3Q9UPQ7 Y_RNA.491-201ENST00000384417 107 ntBASIC3.3□□□□□ -1.88
PDZRN3Q9UPQ7 SNORD45A-201ENST00000384512 84 ntBASIC3.3□□□□□ -1.88
PDZRN3Q9UPQ7 MIR27B-201ENST00000385129 97 ntBASIC3.3□□□□□ -1.88
PDZRN3Q9UPQ7 RNU2-7P-201ENST00000410794 178 ntBASIC3.3□□□□□ -1.88
PDZRN3Q9UPQ7 ATP5J2P3-201ENST00000451550 258 ntBASIC3.3□□□□□ -1.88
PDZRN3Q9UPQ7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDZRN3Q9UPQ7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDZRN3Q9UPQ7 SNORD114-6-201ENST00000364393 72 ntBASIC3.29□□□□□ -1.88
PDZRN3Q9UPQ7 SNORD116-24-201ENST00000384549 92 ntBASIC3.29□□□□□ -1.88
PDZRN3Q9UPQ7 MIR516B2-201ENST00000385190 85 ntBASIC3.29□□□□□ -1.88
PDZRN3Q9UPQ7 SNORD28B-201ENST00000390993 75 ntBASIC3.29□□□□□ -1.88
PDZRN3Q9UPQ7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms