Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
SYNPO2Q9UMS6 Y_RNA.298-201ENST00000364960 107 ntBASIC1.84□□□□□ -2.11
SYNPO2Q9UMS6 RNU6-1056P-201ENST00000383996 107 ntBASIC1.84□□□□□ -2.11
SYNPO2Q9UMS6 AL451046.2-201ENST00000403074 277 ntBASIC1.84□□□□□ -2.11
SYNPO2Q9UMS6 RNU6-1258P-201ENST00000516911 111 ntBASIC1.84□□□□□ -2.11
SYNPO2Q9UMS6 MIR4303-201ENST00000581299 66 ntBASIC1.84□□□□□ -2.11
SYNPO2Q9UMS6 MIR4305-201ENST00000583252 102 ntBASIC1.84□□□□□ -2.11
SYNPO2Q9UMS6 BX248123.2-201ENST00000606318 124 ntBASIC1.84□□□□□ -2.11
SYNPO2Q9UMS6 AL161722.3-201ENST00000605789 2983 ntBASIC1.83□□□□□ -2.12
SYNPO2Q9UMS6 MIR378A-201ENST00000362177 66 ntBASIC1.83□□□□□ -2.12
SYNPO2Q9UMS6 Y_RNA.140-201ENST00000363474 103 ntBASIC1.83□□□□□ -2.12
SYNPO2Q9UMS6 RNU6-60P-201ENST00000364792 103 ntBASIC1.83□□□□□ -2.12
SYNPO2Q9UMS6 RNU6-44P-201ENST00000384045 107 ntBASIC1.83□□□□□ -2.12
SYNPO2Q9UMS6 SNORA51.10-201ENST00000384418 136 ntBASIC1.83□□□□□ -2.12
SYNPO2Q9UMS6 MIR548A3-201ENST00000385297 97 ntBASIC1.83□□□□□ -2.12
SYNPO2Q9UMS6 RNU4-62P-201ENST00000410125 130 ntBASIC1.83□□□□□ -2.12
SYNPO2Q9UMS6 AP1B1P2-201ENST00000416196 106 ntBASIC1.83□□□□□ -2.12
SYNPO2Q9UMS6 AL512326.2-201ENST00000426359 151 ntBASIC1.83□□□□□ -2.12
SYNPO2Q9UMS6 Y_RNA.649-201ENST00000459077 103 ntBASIC1.83□□□□□ -2.12
SYNPO2Q9UMS6 AL512598.1-201ENST00000610158 273 ntBASIC1.83□□□□□ -2.12
SYNPO2Q9UMS6 AL121890.5-201ENST00000620848 304 ntBASIC1.83□□□□□ -2.12
SYNPO2Q9UMS6 AC008133.2-201ENST00000624540 351 ntBASIC1.83□□□□□ -2.12
SYNPO2Q9UMS6 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
SYNPO2Q9UMS6 Y_RNA.346-201ENST00000365385 112 ntBASIC1.82□□□□□ -2.12
SYNPO2Q9UMS6 Y_RNA.537-201ENST00000384626 109 ntBASIC1.82□□□□□ -2.12
SYNPO2Q9UMS6 RNU6-1067P-201ENST00000384752 107 ntBASIC1.82□□□□□ -2.12
SYNPO2Q9UMS6 SNORA26.6-201ENST00000391256 115 ntBASIC1.82□□□□□ -2.12
SYNPO2Q9UMS6 POLR2J4-204ENST00000418424 324 ntBASIC1.82□□□□□ -2.12
SYNPO2Q9UMS6 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.82□□□□□ -2.12
SYNPO2Q9UMS6 RNU7-43P-201ENST00000516554 64 ntBASIC1.82□□□□□ -2.12
SYNPO2Q9UMS6 DNAJC19P9-201ENST00000555084 351 ntBASIC1.82□□□□□ -2.12
SYNPO2Q9UMS6 MIR3192-201ENST00000584920 77 ntBASIC1.82□□□□□ -2.12
SYNPO2Q9UMS6 AL513534.2-201ENST00000603836 250 ntBASIC1.82□□□□□ -2.12
SYNPO2Q9UMS6 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.82□□□□□ -2.12
SYNPO2Q9UMS6 WWP1P1-201ENST00000466609 2769 ntBASIC1.82□□□□□ -2.12
SYNPO2Q9UMS6 Y_RNA.171-201ENST00000363760 102 ntBASIC1.81□□□□□ -2.12
SYNPO2Q9UMS6 SNORA70.7-201ENST00000384159 133 ntBASIC1.81□□□□□ -2.12
SYNPO2Q9UMS6 RNA5SP144-201ENST00000410846 116 ntBASIC1.81□□□□□ -2.12
SYNPO2Q9UMS6 BTF3P4-201ENST00000418852 495 ntBASIC1.81□□□□□ -2.12
SYNPO2Q9UMS6 HSPE1P24-201ENST00000450782 238 ntBASIC1.81□□□□□ -2.12
SYNPO2Q9UMS6 RNU7-53P-201ENST00000516705 60 ntBASIC1.81□□□□□ -2.12
SYNPO2Q9UMS6 AC019176.1-201ENST00000518519 225 ntBASIC1.81□□□□□ -2.12
SYNPO2Q9UMS6 MIR548AO-201ENST00000579992 96 ntBASIC1.81□□□□□ -2.12
SYNPO2Q9UMS6 AL670379.3-201ENST00000605040 251 ntBASIC1.81□□□□□ -2.12
SYNPO2Q9UMS6 AL020996.3-201ENST00000606617 222 ntBASIC1.81□□□□□ -2.12
SYNPO2Q9UMS6 MIR302D-201ENST00000362275 68 ntBASIC1.8□□□□□ -2.12
SYNPO2Q9UMS6 RNU6-834P-201ENST00000362367 110 ntBASIC1.8□□□□□ -2.12
SYNPO2Q9UMS6 Y_RNA.35-201ENST00000362601 101 ntBASIC1.8□□□□□ -2.12
SYNPO2Q9UMS6 SNORD1A-201ENST00000364968 72 ntBASIC1.8□□□□□ -2.12
SYNPO2Q9UMS6 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.8□□□□□ -2.12
SYNPO2Q9UMS6 RNU6-1319P-201ENST00000390855 104 ntBASIC1.8□□□□□ -2.12
SYNPO2Q9UMS6 RNU6-747P-201ENST00000390928 104 ntBASIC1.8□□□□□ -2.12
SYNPO2Q9UMS6 SNORA67.6-201ENST00000391093 99 ntBASIC1.8□□□□□ -2.12
SYNPO2Q9UMS6 RNU6-241P-201ENST00000391148 104 ntBASIC1.8□□□□□ -2.12
SYNPO2Q9UMS6 RNA5SP136-201ENST00000410906 107 ntBASIC1.8□□□□□ -2.12
SYNPO2Q9UMS6 RNU6-177P-201ENST00000411257 104 ntBASIC1.8□□□□□ -2.12
SYNPO2Q9UMS6 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.8□□□□□ -2.12
SYNPO2Q9UMS6 AL035461.1-201ENST00000421490 332 ntBASIC1.8□□□□□ -2.12
SYNPO2Q9UMS6 AC090844.1-201ENST00000422019 156 ntBASIC1.8□□□□□ -2.12
SYNPO2Q9UMS6 RNU7-73P-201ENST00000458743 63 ntBASIC1.8□□□□□ -2.12
SYNPO2Q9UMS6 RNU6-947P-201ENST00000516264 106 ntBASIC1.8□□□□□ -2.12
SYNPO2Q9UMS6 SNORA31.24-201ENST00000517232 57 ntBASIC1.8□□□□□ -2.12
SYNPO2Q9UMS6 AL096861.1-201ENST00000610899 123 ntBASIC1.8□□□□□ -2.12
SYNPO2Q9UMS6 MIR6717-201ENST00000622747 73 ntBASIC1.8□□□□□ -2.12
SYNPO2Q9UMS6 SNORD33-201ENST00000362761 85 ntBASIC1.79□□□□□ -2.12
SYNPO2Q9UMS6 snoU13.25-201ENST00000458945 104 ntBASIC1.79□□□□□ -2.12
SYNPO2Q9UMS6 MIR8055-201ENST00000610739 97 ntBASIC1.79□□□□□ -2.12
SYNPO2Q9UMS6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.79□□□□□ -2.12
SYNPO2Q9UMS6 Y_RNA.81-201ENST00000362997 102 ntBASIC1.78□□□□□ -2.12
SYNPO2Q9UMS6 SNORD116-21-201ENST00000384507 92 ntBASIC1.78□□□□□ -2.12
SYNPO2Q9UMS6 Y_RNA.549-201ENST00000384657 102 ntBASIC1.78□□□□□ -2.12
SYNPO2Q9UMS6 RNY4P18-201ENST00000391107 89 ntBASIC1.78□□□□□ -2.12
SYNPO2Q9UMS6 RNU7-95P-201ENST00000459222 64 ntBASIC1.78□□□□□ -2.12
SYNPO2Q9UMS6 COX6CP6-201ENST00000490840 228 ntBASIC1.78□□□□□ -2.12
SYNPO2Q9UMS6 RNU6-919P-201ENST00000516731 104 ntBASIC1.78□□□□□ -2.12
SYNPO2Q9UMS6 AC004812.1-201ENST00000540773 146 ntBASIC1.78□□□□□ -2.12
SYNPO2Q9UMS6 AL357312.1-201ENST00000603879 298 ntBASIC1.78□□□□□ -2.12
SYNPO2Q9UMS6 AL645939.4-201ENST00000604495 135 ntBASIC1.78□□□□□ -2.12
SYNPO2Q9UMS6 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.78□□□□□ -2.12
SYNPO2Q9UMS6 MIR4251-201ENST00000635819 61 ntBASIC1.78□□□□□ -2.12
SYNPO2Q9UMS6 SNORA63.4-201ENST00000362763 126 ntBASIC1.77□□□□□ -2.13
SYNPO2Q9UMS6 Y_RNA.198-201ENST00000364013 98 ntBASIC1.77□□□□□ -2.13
SYNPO2Q9UMS6 AC009474.2-201ENST00000451383 136 ntBASIC1.77□□□□□ -2.13
SYNPO2Q9UMS6 RPS29P23-201ENST00000458635 123 ntBASIC1.77□□□□□ -2.13
SYNPO2Q9UMS6 AC079140.2-201ENST00000506193 142 ntBASIC1.77□□□□□ -2.13
SYNPO2Q9UMS6 RNA5SP445-201ENST00000515889 115 ntBASIC1.77□□□□□ -2.13
SYNPO2Q9UMS6 SNORD111.1-201ENST00000516421 86 ntBASIC1.77□□□□□ -2.13
SYNPO2Q9UMS6 MIR4422-201ENST00000581938 83 ntBASIC1.77□□□□□ -2.13
SYNPO2Q9UMS6 GHRLOS.1-201ENST00000610995 70 ntBASIC1.77□□□□□ -2.13
SYNPO2Q9UMS6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
SYNPO2Q9UMS6 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.77□□□□□ -2.13
SYNPO2Q9UMS6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
SYNPO2Q9UMS6 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.76□□□□□ -2.13
SYNPO2Q9UMS6 SNORA22.1-201ENST00000362701 134 ntBASIC1.76□□□□□ -2.13
SYNPO2Q9UMS6 SNORA25.3-201ENST00000363205 127 ntBASIC1.76□□□□□ -2.13
SYNPO2Q9UMS6 RNU1-42P-201ENST00000364033 160 ntBASIC1.76□□□□□ -2.13
SYNPO2Q9UMS6 Y_RNA.470-201ENST00000384307 117 ntBASIC1.76□□□□□ -2.13
SYNPO2Q9UMS6 snoU13.16-201ENST00000459350 104 ntBASIC1.76□□□□□ -2.13
SYNPO2Q9UMS6 RNU6-589P-201ENST00000516485 107 ntBASIC1.76□□□□□ -2.13
SYNPO2Q9UMS6 Y_RNA.709-201ENST00000516952 92 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 217.3 ms