Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.24□□□□□ -1.89
PNMA3Q9UL41 RNU6-380P-201ENST00000410207 107 ntBASIC3.23□□□□□ -1.89
PNMA3Q9UL41 AC011753.1-201ENST00000451001 220 ntBASIC3.23□□□□□ -1.89
PNMA3Q9UL41 snoU13.27-201ENST00000459278 104 ntBASIC3.23□□□□□ -1.89
PNMA3Q9UL41 SUB1P4-201ENST00000566062 339 ntBASIC3.23□□□□□ -1.89
PNMA3Q9UL41 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PNMA3Q9UL41 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
PNMA3Q9UL41 MIRLET7A1-201ENST00000362295 80 ntBASIC3.22□□□□□ -1.89
PNMA3Q9UL41 RNY1P2-201ENST00000364820 117 ntBASIC3.22□□□□□ -1.89
PNMA3Q9UL41 RNU6-686P-201ENST00000364839 107 ntBASIC3.22□□□□□ -1.89
PNMA3Q9UL41 MIR1283-2-201ENST00000408621 87 ntBASIC3.22□□□□□ -1.89
PNMA3Q9UL41 RNU7-85P-201ENST00000458851 63 ntBASIC3.22□□□□□ -1.89
PNMA3Q9UL41 RNA5SP385-201ENST00000515947 110 ntBASIC3.22□□□□□ -1.89
PNMA3Q9UL41 AC141846.1-201ENST00000568348 142 ntBASIC3.22□□□□□ -1.89
PNMA3Q9UL41 MIR3134-201ENST00000579433 74 ntBASIC3.22□□□□□ -1.89
PNMA3Q9UL41 MIR548AO-201ENST00000579992 96 ntBASIC3.22□□□□□ -1.89
PNMA3Q9UL41 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.22□□□□□ -1.89
PNMA3Q9UL41 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
PNMA3Q9UL41 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.21□□□□□ -1.9
PNMA3Q9UL41 MIR424-201ENST00000362227 98 ntBASIC3.21□□□□□ -1.9
PNMA3Q9UL41 SNORA63.2-201ENST00000362603 126 ntBASIC3.21□□□□□ -1.9
PNMA3Q9UL41 RNU1-112P-201ENST00000364401 164 ntBASIC3.21□□□□□ -1.9
PNMA3Q9UL41 RNU1-148P-201ENST00000384472 162 ntBASIC3.21□□□□□ -1.9
PNMA3Q9UL41 SNORD38B-201ENST00000384690 67 ntBASIC3.21□□□□□ -1.9
PNMA3Q9UL41 MIR627-201ENST00000384979 97 ntBASIC3.21□□□□□ -1.9
PNMA3Q9UL41 SNORA48.1-201ENST00000390879 135 ntBASIC3.21□□□□□ -1.9
PNMA3Q9UL41 AC104389.3-201ENST00000445629 235 ntBASIC3.21□□□□□ -1.9
PNMA3Q9UL41 SCARNA18B-201ENST00000458806 135 ntBASIC3.21□□□□□ -1.9
PNMA3Q9UL41 RNA5SP481-201ENST00000516814 122 ntBASIC3.21□□□□□ -1.9
PNMA3Q9UL41 MIR6817-201ENST00000615588 66 ntBASIC3.21□□□□□ -1.9
PNMA3Q9UL41 SNORD38B-202ENST00000625943 69 ntBASIC3.21□□□□□ -1.9
PNMA3Q9UL41 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PNMA3Q9UL41 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.21□□□□□ -1.9
PNMA3Q9UL41 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.21□□□□□ -1.9
PNMA3Q9UL41 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PNMA3Q9UL41 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PNMA3Q9UL41 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
PNMA3Q9UL41 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.2□□□□□ -1.9
PNMA3Q9UL41 RNA5SP68-201ENST00000363885 119 ntBASIC3.2□□□□□ -1.9
PNMA3Q9UL41 RNU1-91P-201ENST00000364746 163 ntBASIC3.2□□□□□ -1.9
PNMA3Q9UL41 Y_RNA.508-201ENST00000384502 114 ntBASIC3.2□□□□□ -1.9
PNMA3Q9UL41 RNU6-296P-201ENST00000384608 107 ntBASIC3.2□□□□□ -1.9
PNMA3Q9UL41 RNU4-83P-201ENST00000410863 133 ntBASIC3.2□□□□□ -1.9
PNMA3Q9UL41 HMGN2P3-201ENST00000433603 273 ntBASIC3.2□□□□□ -1.9
PNMA3Q9UL41 HMGN2P5-201ENST00000436882 273 ntBASIC3.2□□□□□ -1.9
PNMA3Q9UL41 RNA5SP137-201ENST00000516833 135 ntBASIC3.2□□□□□ -1.9
PNMA3Q9UL41 MIR4506-201ENST00000584693 77 ntBASIC3.2□□□□□ -1.9
PNMA3Q9UL41 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PNMA3Q9UL41 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.19□□□□□ -1.9
PNMA3Q9UL41 RNU6-112P-201ENST00000363599 104 ntBASIC3.19□□□□□ -1.9
PNMA3Q9UL41 SNORA70B-201ENST00000384210 135 ntBASIC3.19□□□□□ -1.9
PNMA3Q9UL41 RNU6-411P-201ENST00000384451 107 ntBASIC3.19□□□□□ -1.9
PNMA3Q9UL41 RNA5SP465-201ENST00000391195 109 ntBASIC3.19□□□□□ -1.9
PNMA3Q9UL41 RNA5SP237-201ENST00000410414 113 ntBASIC3.19□□□□□ -1.9
PNMA3Q9UL41 RN7SKP123-201ENST00000410732 291 ntBASIC3.19□□□□□ -1.9
PNMA3Q9UL41 SNRPGP12-201ENST00000449481 213 ntBASIC3.19□□□□□ -1.9
PNMA3Q9UL41 MIR4796-201ENST00000580742 81 ntBASIC3.19□□□□□ -1.9
PNMA3Q9UL41 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PNMA3Q9UL41 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
PNMA3Q9UL41 MIR512-1-201ENST00000384913 84 ntBASIC3.18□□□□□ -1.9
PNMA3Q9UL41 MIR520C-201ENST00000385005 87 ntBASIC3.18□□□□□ -1.9
PNMA3Q9UL41 AC019129.1-201ENST00000403786 261 ntBASIC3.18□□□□□ -1.9
PNMA3Q9UL41 Y_RNA.648-201ENST00000459455 110 ntBASIC3.18□□□□□ -1.9
PNMA3Q9UL41 AC090897.1-201ENST00000580909 226 ntBASIC3.18□□□□□ -1.9
PNMA3Q9UL41 AL662814.1-201ENST00000617364 121 ntBASIC3.18□□□□□ -1.9
PNMA3Q9UL41 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.18□□□□□ -1.9
PNMA3Q9UL41 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PNMA3Q9UL41 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PNMA3Q9UL41 SNORA38-201ENST00000363946 132 ntBASIC3.17□□□□□ -1.9
PNMA3Q9UL41 AC027119.1-201ENST00000440877 241 ntBASIC3.17□□□□□ -1.9
PNMA3Q9UL41 RNU7-26P-201ENST00000458980 63 ntBASIC3.17□□□□□ -1.9
PNMA3Q9UL41 AC008413.1-201ENST00000511864 177 ntBASIC3.17□□□□□ -1.9
PNMA3Q9UL41 RNU6-871P-201ENST00000516122 100 ntBASIC3.17□□□□□ -1.9
PNMA3Q9UL41 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PNMA3Q9UL41 MIR26A1-201ENST00000362205 77 ntBASIC3.16□□□□□ -1.9
PNMA3Q9UL41 RNA5SP432-201ENST00000362480 116 ntBASIC3.16□□□□□ -1.9
PNMA3Q9UL41 RNU6-949P-201ENST00000384040 107 ntBASIC3.16□□□□□ -1.9
PNMA3Q9UL41 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.16□□□□□ -1.9
PNMA3Q9UL41 Y_RNA.660-201ENST00000516002 120 ntBASIC3.16□□□□□ -1.9
PNMA3Q9UL41 MIR887-201ENST00000401258 79 ntBASIC3.15□□□□□ -1.91
PNMA3Q9UL41 AC092427.1-202ENST00000430569 476 ntBASIC3.15□□□□□ -1.91
PNMA3Q9UL41 AP004217.1-201ENST00000480579 346 ntBASIC3.15□□□□□ -1.91
PNMA3Q9UL41 FGF7P7-201ENST00000514120 227 ntBASIC3.15□□□□□ -1.91
PNMA3Q9UL41 RNA5SP24-201ENST00000516478 95 ntBASIC3.15□□□□□ -1.91
PNMA3Q9UL41 RNA5SP148-201ENST00000516527 94 ntBASIC3.15□□□□□ -1.91
PNMA3Q9UL41 RNU6-850P-201ENST00000516934 103 ntBASIC3.15□□□□□ -1.91
PNMA3Q9UL41 MIR4251-201ENST00000635819 61 ntBASIC3.15□□□□□ -1.91
PNMA3Q9UL41 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PNMA3Q9UL41 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PNMA3Q9UL41 RNU6-161P-201ENST00000363051 106 ntBASIC3.14□□□□□ -1.91
PNMA3Q9UL41 SNORA25.9-201ENST00000365087 128 ntBASIC3.14□□□□□ -1.91
PNMA3Q9UL41 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PNMA3Q9UL41 RPS27P21-201ENST00000486977 252 ntBASIC3.14□□□□□ -1.91
PNMA3Q9UL41 SNORA31.26-201ENST00000517250 137 ntBASIC3.14□□□□□ -1.91
PNMA3Q9UL41 MIR3935-201ENST00000583472 104 ntBASIC3.14□□□□□ -1.91
PNMA3Q9UL41 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.14□□□□□ -1.91
PNMA3Q9UL41 WWP1P1-201ENST00000466609 2769 ntBASIC3.13□□□□□ -1.91
PNMA3Q9UL41 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PNMA3Q9UL41 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PNMA3Q9UL41 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms