Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.29□□□□□ -2.04
FOXD3Q9UJU5 SNORD53-201ENST00000579969 78 ntBASIC2.29□□□□□ -2.04
FOXD3Q9UJU5 MIR4439-201ENST00000583746 80 ntBASIC2.29□□□□□ -2.04
FOXD3Q9UJU5 GHRLOS.1-201ENST00000610995 70 ntBASIC2.29□□□□□ -2.04
FOXD3Q9UJU5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.29□□□□□ -2.04
FOXD3Q9UJU5 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
FOXD3Q9UJU5 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
FOXD3Q9UJU5 SNORD73B-201ENST00000364394 72 ntBASIC2.28□□□□□ -2.04
FOXD3Q9UJU5 SNORA67.4-201ENST00000384688 142 ntBASIC2.28□□□□□ -2.04
FOXD3Q9UJU5 MIR206-201ENST00000384872 86 ntBASIC2.28□□□□□ -2.04
FOXD3Q9UJU5 RNU6-447P-201ENST00000410293 104 ntBASIC2.28□□□□□ -2.04
FOXD3Q9UJU5 RNU6-1118P-201ENST00000410382 104 ntBASIC2.28□□□□□ -2.04
FOXD3Q9UJU5 RNU6-1076P-201ENST00000410397 104 ntBASIC2.28□□□□□ -2.04
FOXD3Q9UJU5 RNU6-355P-201ENST00000410427 104 ntBASIC2.28□□□□□ -2.04
FOXD3Q9UJU5 RNU6-791P-201ENST00000410467 104 ntBASIC2.28□□□□□ -2.04
FOXD3Q9UJU5 RNU6-705P-201ENST00000410601 104 ntBASIC2.28□□□□□ -2.04
FOXD3Q9UJU5 RNU6-1100P-201ENST00000410691 104 ntBASIC2.28□□□□□ -2.04
FOXD3Q9UJU5 RNU6-860P-201ENST00000410860 104 ntBASIC2.28□□□□□ -2.04
FOXD3Q9UJU5 RNU6-1217P-201ENST00000411276 104 ntBASIC2.28□□□□□ -2.04
FOXD3Q9UJU5 RNU6-785P-201ENST00000411324 104 ntBASIC2.28□□□□□ -2.04
FOXD3Q9UJU5 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.28□□□□□ -2.04
FOXD3Q9UJU5 RNU6-922P-201ENST00000516753 99 ntBASIC2.28□□□□□ -2.04
FOXD3Q9UJU5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.28□□□□□ -2.04
FOXD3Q9UJU5 U6.90-201ENST00000614007 104 ntBASIC2.28□□□□□ -2.04
FOXD3Q9UJU5 U6.70-201ENST00000620287 104 ntBASIC2.28□□□□□ -2.04
FOXD3Q9UJU5 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.28□□□□□ -2.04
FOXD3Q9UJU5 MIR6073-201ENST00000352083 89 ntBASIC2.27□□□□□ -2.05
FOXD3Q9UJU5 SNORD114-10-201ENST00000363409 72 ntBASIC2.27□□□□□ -2.05
FOXD3Q9UJU5 DEFA7P-201ENST00000382676 285 ntBASIC2.27□□□□□ -2.05
FOXD3Q9UJU5 RNA5SP210-201ENST00000391034 120 ntBASIC2.27□□□□□ -2.05
FOXD3Q9UJU5 MIR1261-201ENST00000408659 82 ntBASIC2.27□□□□□ -2.05
FOXD3Q9UJU5 HSPE1P24-201ENST00000450782 238 ntBASIC2.27□□□□□ -2.05
FOXD3Q9UJU5 RNU7-79P-201ENST00000516082 62 ntBASIC2.27□□□□□ -2.05
FOXD3Q9UJU5 MIR5092-201ENST00000583139 88 ntBASIC2.27□□□□□ -2.05
FOXD3Q9UJU5 AC012531.4-201ENST00000616509 177 ntBASIC2.27□□□□□ -2.05
FOXD3Q9UJU5 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
FOXD3Q9UJU5 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
FOXD3Q9UJU5 WWP1P1-201ENST00000466609 2769 ntBASIC2.26□□□□□ -2.05
FOXD3Q9UJU5 Y_RNA.95-201ENST00000363079 95 ntBASIC2.26□□□□□ -2.05
FOXD3Q9UJU5 MRPL35P3-201ENST00000421557 364 ntBASIC2.26□□□□□ -2.05
FOXD3Q9UJU5 AC090844.1-201ENST00000422019 156 ntBASIC2.26□□□□□ -2.05
FOXD3Q9UJU5 AC008413.1-201ENST00000511864 177 ntBASIC2.26□□□□□ -2.05
FOXD3Q9UJU5 Y_RNA.659-201ENST00000515994 113 ntBASIC2.26□□□□□ -2.05
FOXD3Q9UJU5 RNU6-795P-201ENST00000516323 103 ntBASIC2.26□□□□□ -2.05
FOXD3Q9UJU5 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
FOXD3Q9UJU5 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.25□□□□□ -2.05
FOXD3Q9UJU5 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.25□□□□□ -2.05
FOXD3Q9UJU5 RNU6-60P-201ENST00000364792 103 ntBASIC2.25□□□□□ -2.05
FOXD3Q9UJU5 RNY1P7-201ENST00000384743 110 ntBASIC2.25□□□□□ -2.05
FOXD3Q9UJU5 RPL31P63-201ENST00000422565 375 ntBASIC2.25□□□□□ -2.05
FOXD3Q9UJU5 RNU7-61P-201ENST00000515897 61 ntBASIC2.25□□□□□ -2.05
FOXD3Q9UJU5 MIR4299-201ENST00000577899 72 ntBASIC2.25□□□□□ -2.05
FOXD3Q9UJU5 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.25□□□□□ -2.05
FOXD3Q9UJU5 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
FOXD3Q9UJU5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
FOXD3Q9UJU5 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
FOXD3Q9UJU5 RNA5SP425-201ENST00000410336 112 ntBASIC2.24□□□□□ -2.05
FOXD3Q9UJU5 RNA5SP237-201ENST00000410414 113 ntBASIC2.24□□□□□ -2.05
FOXD3Q9UJU5 SNORD67.1-201ENST00000516618 108 ntBASIC2.24□□□□□ -2.05
FOXD3Q9UJU5 Y_RNA.705-201ENST00000516862 110 ntBASIC2.24□□□□□ -2.05
FOXD3Q9UJU5 MIR3192-201ENST00000584920 77 ntBASIC2.24□□□□□ -2.05
FOXD3Q9UJU5 AC067747.1-201ENST00000608026 250 ntBASIC2.24□□□□□ -2.05
FOXD3Q9UJU5 MIR6840-201ENST00000611937 71 ntBASIC2.24□□□□□ -2.05
FOXD3Q9UJU5 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
FOXD3Q9UJU5 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
FOXD3Q9UJU5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
FOXD3Q9UJU5 U8.2-201ENST00000363156 134 ntBASIC2.23□□□□□ -2.05
FOXD3Q9UJU5 SNORD38.1-201ENST00000363863 68 ntBASIC2.23□□□□□ -2.05
FOXD3Q9UJU5 RNA5SP456-201ENST00000364002 114 ntBASIC2.23□□□□□ -2.05
FOXD3Q9UJU5 MIR17-201ENST00000385012 84 ntBASIC2.23□□□□□ -2.05
FOXD3Q9UJU5 AC019129.1-201ENST00000403786 261 ntBASIC2.23□□□□□ -2.05
FOXD3Q9UJU5 AL356320.1-201ENST00000429616 163 ntBASIC2.23□□□□□ -2.05
FOXD3Q9UJU5 RPL39P39-201ENST00000455840 151 ntBASIC2.23□□□□□ -2.05
FOXD3Q9UJU5 RNU7-137P-201ENST00000516788 62 ntBASIC2.23□□□□□ -2.05
FOXD3Q9UJU5 SNORA44.1-201ENST00000517031 108 ntBASIC2.23□□□□□ -2.05
FOXD3Q9UJU5 MIR4777-201ENST00000583710 86 ntBASIC2.23□□□□□ -2.05
FOXD3Q9UJU5 AL096861.1-201ENST00000610899 123 ntBASIC2.23□□□□□ -2.05
FOXD3Q9UJU5 ZNF658B-202ENST00000615961 3375 ntBASIC2.23□□□□□ -2.05
FOXD3Q9UJU5 AC080100.1-201ENST00000624239 5356 ntBASIC2.22□□□□□ -2.05
FOXD3Q9UJU5 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
FOXD3Q9UJU5 RNU6-865P-201ENST00000364772 107 ntBASIC2.22□□□□□ -2.05
FOXD3Q9UJU5 Y_RNA.290-201ENST00000364879 114 ntBASIC2.22□□□□□ -2.05
FOXD3Q9UJU5 MIR144-201ENST00000384886 86 ntBASIC2.22□□□□□ -2.05
FOXD3Q9UJU5 SNORA26.2-201ENST00000390922 122 ntBASIC2.22□□□□□ -2.05
FOXD3Q9UJU5 RNU6-644P-201ENST00000391155 98 ntBASIC2.22□□□□□ -2.05
FOXD3Q9UJU5 RNU4-53P-201ENST00000410828 140 ntBASIC2.22□□□□□ -2.05
FOXD3Q9UJU5 AL445685.2-201ENST00000422551 342 ntBASIC2.22□□□□□ -2.05
FOXD3Q9UJU5 RNA5SP320-201ENST00000516263 124 ntBASIC2.22□□□□□ -2.05
FOXD3Q9UJU5 MIR5694-201ENST00000581190 76 ntBASIC2.22□□□□□ -2.05
FOXD3Q9UJU5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
FOXD3Q9UJU5 RNU6-396P-201ENST00000365369 105 ntBASIC2.21□□□□□ -2.06
FOXD3Q9UJU5 Y_RNA.448-201ENST00000384185 108 ntBASIC2.21□□□□□ -2.06
FOXD3Q9UJU5 RNU6-972P-201ENST00000391208 107 ntBASIC2.21□□□□□ -2.06
FOXD3Q9UJU5 AL359511.1-201ENST00000402970 211 ntBASIC2.21□□□□□ -2.06
FOXD3Q9UJU5 RNA5SP181-201ENST00000410246 98 ntBASIC2.21□□□□□ -2.06
FOXD3Q9UJU5 RNU1-41P-201ENST00000516161 162 ntBASIC2.21□□□□□ -2.06
FOXD3Q9UJU5 RNU1-48P-201ENST00000516400 162 ntBASIC2.21□□□□□ -2.06
FOXD3Q9UJU5 RNU6-1006P-201ENST00000516998 103 ntBASIC2.21□□□□□ -2.06
FOXD3Q9UJU5 RNA5SP402-201ENST00000517148 110 ntBASIC2.21□□□□□ -2.06
FOXD3Q9UJU5 AC026421.1-201ENST00000519101 163 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 182.4 ms