Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.02□□□□□ -2.09
UBP1Q9NZI7 AC019176.1-201ENST00000518519 225 ntBASIC2.02□□□□□ -2.09
UBP1Q9NZI7 MIR4422-201ENST00000581938 83 ntBASIC2.02□□□□□ -2.09
UBP1Q9NZI7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.02□□□□□ -2.09
UBP1Q9NZI7 MIR8065-201ENST00000620577 100 ntBASIC2.02□□□□□ -2.09
UBP1Q9NZI7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
UBP1Q9NZI7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.02□□□□□ -2.09
UBP1Q9NZI7 SNORD115-19-201ENST00000363098 82 ntBASIC2.01□□□□□ -2.09
UBP1Q9NZI7 SNORD115-18-201ENST00000363293 82 ntBASIC2.01□□□□□ -2.09
UBP1Q9NZI7 RNU6-153P-201ENST00000364422 104 ntBASIC2.01□□□□□ -2.09
UBP1Q9NZI7 SNORD115-17-201ENST00000364612 82 ntBASIC2.01□□□□□ -2.09
UBP1Q9NZI7 RNA5SP138-201ENST00000365098 114 ntBASIC2.01□□□□□ -2.09
UBP1Q9NZI7 Y_RNA.549-201ENST00000384657 102 ntBASIC2.01□□□□□ -2.09
UBP1Q9NZI7 SNORD77B-201ENST00000391112 67 ntBASIC2.01□□□□□ -2.09
UBP1Q9NZI7 RNU1-78P-201ENST00000391248 165 ntBASIC2.01□□□□□ -2.09
UBP1Q9NZI7 AC245047.7-201ENST00000440265 293 ntBASIC2.01□□□□□ -2.09
UBP1Q9NZI7 snoU13.26-201ENST00000459452 105 ntBASIC2.01□□□□□ -2.09
UBP1Q9NZI7 AL133373.1-201ENST00000497098 94 ntBASIC2.01□□□□□ -2.09
UBP1Q9NZI7 AL035470.1-201ENST00000622571 220 ntBASIC2.01□□□□□ -2.09
UBP1Q9NZI7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.01□□□□□ -2.09
UBP1Q9NZI7 AL359851.1-201ENST00000569460 4997 ntBASIC2□□□□□ -2.09
UBP1Q9NZI7 SNORA63.4-201ENST00000362763 126 ntBASIC2□□□□□ -2.09
UBP1Q9NZI7 SNORA63.5-201ENST00000363548 123 ntBASIC2□□□□□ -2.09
UBP1Q9NZI7 Y_RNA.470-201ENST00000384307 117 ntBASIC2□□□□□ -2.09
UBP1Q9NZI7 AC245517.4-201ENST00000448601 281 ntBASIC2□□□□□ -2.09
UBP1Q9NZI7 RNU6-947P-201ENST00000516264 106 ntBASIC2□□□□□ -2.09
UBP1Q9NZI7 AC087741.2-201ENST00000619415 172 ntBASIC2□□□□□ -2.09
UBP1Q9NZI7 MIR7843-201ENST00000622274 79 ntBASIC2□□□□□ -2.09
UBP1Q9NZI7 AL391516.1-201ENST00000554380 2449 ntBASIC2□□□□□ -2.09
UBP1Q9NZI7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2□□□□□ -2.09
UBP1Q9NZI7 Y_RNA.309-201ENST00000365046 111 ntBASIC1.99□□□□□ -2.09
UBP1Q9NZI7 Y_RNA.323-201ENST00000365157 109 ntBASIC1.99□□□□□ -2.09
UBP1Q9NZI7 Y_RNA.344-201ENST00000365381 112 ntBASIC1.99□□□□□ -2.09
UBP1Q9NZI7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
UBP1Q9NZI7 MIR3664-201ENST00000579074 99 ntBASIC1.99□□□□□ -2.09
UBP1Q9NZI7 MIR4648-201ENST00000580107 72 ntBASIC1.99□□□□□ -2.09
UBP1Q9NZI7 MIR548AE2-201ENST00000583456 67 ntBASIC1.99□□□□□ -2.09
UBP1Q9NZI7 RNU6-94P-201ENST00000607728 107 ntBASIC1.99□□□□□ -2.09
UBP1Q9NZI7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
UBP1Q9NZI7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
UBP1Q9NZI7 RNU4-52P-201ENST00000384209 138 ntBASIC1.98□□□□□ -2.09
UBP1Q9NZI7 MIR934-201ENST00000401241 83 ntBASIC1.98□□□□□ -2.09
UBP1Q9NZI7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.98□□□□□ -2.09
UBP1Q9NZI7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
UBP1Q9NZI7 RNA5SP445-201ENST00000515889 115 ntBASIC1.98□□□□□ -2.09
UBP1Q9NZI7 RNU11-2P-201ENST00000516898 142 ntBASIC1.98□□□□□ -2.09
UBP1Q9NZI7 AL162726.3-218ENST00000636401 95 ntBASIC1.98□□□□□ -2.09
UBP1Q9NZI7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
UBP1Q9NZI7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
UBP1Q9NZI7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
UBP1Q9NZI7 RNA5SP432-201ENST00000362480 116 ntBASIC1.97□□□□□ -2.09
UBP1Q9NZI7 Y_RNA.116-201ENST00000363292 103 ntBASIC1.97□□□□□ -2.09
UBP1Q9NZI7 RNU6-396P-201ENST00000365369 105 ntBASIC1.97□□□□□ -2.09
UBP1Q9NZI7 MIR1912-201ENST00000410389 80 ntBASIC1.97□□□□□ -2.09
UBP1Q9NZI7 AC090844.1-201ENST00000422019 156 ntBASIC1.97□□□□□ -2.09
UBP1Q9NZI7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
UBP1Q9NZI7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
UBP1Q9NZI7 AC079804.2-201ENST00000490376 200 ntBASIC1.96□□□□□ -2.1
UBP1Q9NZI7 AC068339.1-201ENST00000526965 141 ntBASIC1.96□□□□□ -2.1
UBP1Q9NZI7 AL512310.8-201ENST00000550183 120 ntBASIC1.96□□□□□ -2.1
UBP1Q9NZI7 AP000942.3-201ENST00000603702 160 ntBASIC1.96□□□□□ -2.1
UBP1Q9NZI7 PRELID3BP2-201ENST00000605362 201 ntBASIC1.96□□□□□ -2.1
UBP1Q9NZI7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.96□□□□□ -2.1
UBP1Q9NZI7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
UBP1Q9NZI7 RNU6-1014P-201ENST00000383940 103 ntBASIC1.95□□□□□ -2.1
UBP1Q9NZI7 AC019129.1-201ENST00000403786 261 ntBASIC1.95□□□□□ -2.1
UBP1Q9NZI7 MIR1302-5-201ENST00000408164 150 ntBASIC1.95□□□□□ -2.1
UBP1Q9NZI7 MIR1302-7-201ENST00000408841 72 ntBASIC1.95□□□□□ -2.1
UBP1Q9NZI7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.95□□□□□ -2.1
UBP1Q9NZI7 HMGN2P38-201ENST00000423806 265 ntBASIC1.95□□□□□ -2.1
UBP1Q9NZI7 MIR2115-201ENST00000516657 100 ntBASIC1.95□□□□□ -2.1
UBP1Q9NZI7 AP003716.2-201ENST00000528260 108 ntBASIC1.95□□□□□ -2.1
UBP1Q9NZI7 MIR5009-201ENST00000578736 100 ntBASIC1.95□□□□□ -2.1
UBP1Q9NZI7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.95□□□□□ -2.1
UBP1Q9NZI7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.95□□□□□ -2.1
UBP1Q9NZI7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
UBP1Q9NZI7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.94□□□□□ -2.1
UBP1Q9NZI7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
UBP1Q9NZI7 RNU6-106P-201ENST00000384405 107 ntBASIC1.94□□□□□ -2.1
UBP1Q9NZI7 SNORA18-201ENST00000384416 132 ntBASIC1.94□□□□□ -2.1
UBP1Q9NZI7 Y_RNA.507-201ENST00000384500 99 ntBASIC1.94□□□□□ -2.1
UBP1Q9NZI7 MIR504-201ENST00000385065 83 ntBASIC1.94□□□□□ -2.1
UBP1Q9NZI7 MT-TN-201ENST00000387400 73 ntBASIC1.94□□□□□ -2.1
UBP1Q9NZI7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
UBP1Q9NZI7 MIR1289-2-201ENST00000408360 111 ntBASIC1.94□□□□□ -2.1
UBP1Q9NZI7 AL031737.1-201ENST00000450125 223 ntBASIC1.94□□□□□ -2.1
UBP1Q9NZI7 snoU13.25-201ENST00000458945 104 ntBASIC1.94□□□□□ -2.1
UBP1Q9NZI7 RN7SL274P-201ENST00000492268 272 ntBASIC1.94□□□□□ -2.1
UBP1Q9NZI7 AC024614.2-201ENST00000577584 372 ntBASIC1.94□□□□□ -2.1
UBP1Q9NZI7 MIR3618-201ENST00000580330 88 ntBASIC1.94□□□□□ -2.1
UBP1Q9NZI7 AP000753.3-201ENST00000604083 169 ntBASIC1.94□□□□□ -2.1
UBP1Q9NZI7 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.94□□□□□ -2.1
UBP1Q9NZI7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
UBP1Q9NZI7 RNA5SP264-201ENST00000363115 107 ntBASIC1.93□□□□□ -2.1
UBP1Q9NZI7 SNORA25.3-201ENST00000363205 127 ntBASIC1.93□□□□□ -2.1
UBP1Q9NZI7 Y_RNA.163-201ENST00000363702 113 ntBASIC1.93□□□□□ -2.1
UBP1Q9NZI7 U8.6-201ENST00000364939 135 ntBASIC1.93□□□□□ -2.1
UBP1Q9NZI7 RNU6-816P-201ENST00000390914 107 ntBASIC1.93□□□□□ -2.1
UBP1Q9NZI7 RNU6-1268P-201ENST00000391214 107 ntBASIC1.93□□□□□ -2.1
UBP1Q9NZI7 RNU6-1239P-201ENST00000391310 107 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms