Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC108667.1-201ENST00000428618 249 ntBASIC1.13□□□□□ -2.23
LIN7CQ9NUP9 RNA5SP458-201ENST00000516188 119 ntBASIC1.13□□□□□ -2.23
LIN7CQ9NUP9 RNU1-92P-201ENST00000517017 135 ntBASIC1.13□□□□□ -2.23
LIN7CQ9NUP9 RNU2-60P-201ENST00000517290 128 ntBASIC1.13□□□□□ -2.23
LIN7CQ9NUP9 MIR3152-201ENST00000579801 74 ntBASIC1.13□□□□□ -2.23
LIN7CQ9NUP9 RNU6-94P-201ENST00000607728 107 ntBASIC1.13□□□□□ -2.23
LIN7CQ9NUP9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
LIN7CQ9NUP9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
LIN7CQ9NUP9 MIR377-201ENST00000362145 69 ntBASIC1.12□□□□□ -2.23
LIN7CQ9NUP9 Y_RNA.140-201ENST00000363474 103 ntBASIC1.12□□□□□ -2.23
LIN7CQ9NUP9 SNORD18B-201ENST00000365659 72 ntBASIC1.12□□□□□ -2.23
LIN7CQ9NUP9 Y_RNA.464-201ENST00000384282 110 ntBASIC1.12□□□□□ -2.23
LIN7CQ9NUP9 SNORD12C-201ENST00000386307 89 ntBASIC1.12□□□□□ -2.23
LIN7CQ9NUP9 MT-TR-201ENST00000387439 65 ntBASIC1.12□□□□□ -2.23
LIN7CQ9NUP9 RNU4-62P-201ENST00000410125 130 ntBASIC1.12□□□□□ -2.23
LIN7CQ9NUP9 MTATP6P21-201ENST00000440681 189 ntBASIC1.12□□□□□ -2.23
LIN7CQ9NUP9 RPS23P4-201ENST00000487908 423 ntBASIC1.12□□□□□ -2.23
LIN7CQ9NUP9 MIR378A-201ENST00000362177 66 ntBASIC1.11□□□□□ -2.23
LIN7CQ9NUP9 RNU6-580P-201ENST00000365159 107 ntBASIC1.11□□□□□ -2.23
LIN7CQ9NUP9 Y_RNA.430-201ENST00000384081 110 ntBASIC1.11□□□□□ -2.23
LIN7CQ9NUP9 MIR150-201ENST00000385048 84 ntBASIC1.11□□□□□ -2.23
LIN7CQ9NUP9 MIR513C-201ENST00000401352 84 ntBASIC1.11□□□□□ -2.23
LIN7CQ9NUP9 RNU6-349P-201ENST00000362402 107 ntBASIC1.1□□□□□ -2.23
LIN7CQ9NUP9 RNU6-508P-201ENST00000363231 103 ntBASIC1.1□□□□□ -2.23
LIN7CQ9NUP9 Y_RNA.354-201ENST00000365448 111 ntBASIC1.1□□□□□ -2.23
LIN7CQ9NUP9 RNU6-209P-201ENST00000384118 107 ntBASIC1.1□□□□□ -2.23
LIN7CQ9NUP9 MIR942-201ENST00000401111 86 ntBASIC1.1□□□□□ -2.23
LIN7CQ9NUP9 RNU7-197P-201ENST00000458836 62 ntBASIC1.1□□□□□ -2.23
LIN7CQ9NUP9 RNU7-62P-201ENST00000458856 62 ntBASIC1.1□□□□□ -2.23
LIN7CQ9NUP9 SNORA25.12-201ENST00000516202 82 ntBASIC1.1□□□□□ -2.23
LIN7CQ9NUP9 Y_RNA.686-201ENST00000516548 134 ntBASIC1.1□□□□□ -2.23
LIN7CQ9NUP9 MIR3124-201ENST00000582636 67 ntBASIC1.1□□□□□ -2.23
LIN7CQ9NUP9 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.1□□□□□ -2.23
LIN7CQ9NUP9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
LIN7CQ9NUP9 SNORA22.1-201ENST00000362701 134 ntBASIC1.09□□□□□ -2.23
LIN7CQ9NUP9 Y_RNA.120-201ENST00000363304 110 ntBASIC1.09□□□□□ -2.23
LIN7CQ9NUP9 Y_RNA.215-201ENST00000364204 112 ntBASIC1.09□□□□□ -2.23
LIN7CQ9NUP9 Y_RNA.400-201ENST00000383963 111 ntBASIC1.09□□□□□ -2.23
LIN7CQ9NUP9 MIR200A-201ENST00000384875 90 ntBASIC1.09□□□□□ -2.23
LIN7CQ9NUP9 MIR588-201ENST00000384900 83 ntBASIC1.09□□□□□ -2.23
LIN7CQ9NUP9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.09□□□□□ -2.23
LIN7CQ9NUP9 RNU6-460P-201ENST00000391158 108 ntBASIC1.09□□□□□ -2.23
LIN7CQ9NUP9 MIR548I1-201ENST00000408810 149 ntBASIC1.09□□□□□ -2.23
LIN7CQ9NUP9 RNU6-994P-201ENST00000410507 111 ntBASIC1.09□□□□□ -2.23
LIN7CQ9NUP9 RNU7-95P-201ENST00000459222 64 ntBASIC1.09□□□□□ -2.23
LIN7CQ9NUP9 snoU13.21-201ENST00000459368 105 ntBASIC1.09□□□□□ -2.23
LIN7CQ9NUP9 MIR4421-201ENST00000578133 69 ntBASIC1.09□□□□□ -2.23
LIN7CQ9NUP9 MIR548X2-201ENST00000579776 100 ntBASIC1.09□□□□□ -2.23
LIN7CQ9NUP9 MIR6740-201ENST00000618268 113 ntBASIC1.09□□□□□ -2.23
LIN7CQ9NUP9 Y_RNA.170-201ENST00000363746 110 ntBASIC1.08□□□□□ -2.24
LIN7CQ9NUP9 RNU6-309P-201ENST00000364573 106 ntBASIC1.08□□□□□ -2.24
LIN7CQ9NUP9 SNORD114-24-201ENST00000365029 72 ntBASIC1.08□□□□□ -2.24
LIN7CQ9NUP9 RNU6-690P-201ENST00000365242 106 ntBASIC1.08□□□□□ -2.24
LIN7CQ9NUP9 snoU13.2-201ENST00000459201 104 ntBASIC1.08□□□□□ -2.24
LIN7CQ9NUP9 Y_RNA.690-201ENST00000516603 95 ntBASIC1.08□□□□□ -2.24
LIN7CQ9NUP9 RNU6-1212P-201ENST00000517023 104 ntBASIC1.08□□□□□ -2.24
LIN7CQ9NUP9 AC012676.2-201ENST00000619258 186 ntBASIC1.08□□□□□ -2.24
LIN7CQ9NUP9 MIR6841-201ENST00000637129 72 ntBASIC1.08□□□□□ -2.24
LIN7CQ9NUP9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.07□□□□□ -2.24
LIN7CQ9NUP9 AP1B1P2-201ENST00000416196 106 ntBASIC1.07□□□□□ -2.24
LIN7CQ9NUP9 BTF3P4-201ENST00000418852 495 ntBASIC1.07□□□□□ -2.24
LIN7CQ9NUP9 OR2A41P-201ENST00000473586 105 ntBASIC1.07□□□□□ -2.24
LIN7CQ9NUP9 RNU6-240P-201ENST00000516098 97 ntBASIC1.07□□□□□ -2.24
LIN7CQ9NUP9 RN7SKP179-201ENST00000516126 217 ntBASIC1.07□□□□□ -2.24
LIN7CQ9NUP9 RNU6-255P-201ENST00000516957 105 ntBASIC1.07□□□□□ -2.24
LIN7CQ9NUP9 AC068338.1-201ENST00000565567 176 ntBASIC1.07□□□□□ -2.24
LIN7CQ9NUP9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.07□□□□□ -2.24
LIN7CQ9NUP9 AC011603.4-201ENST00000611325 277 ntBASIC1.07□□□□□ -2.24
LIN7CQ9NUP9 uc_338.6-201ENST00000613544 171 ntBASIC1.07□□□□□ -2.24
LIN7CQ9NUP9 SNORA7.1-201ENST00000363750 139 ntBASIC1.06□□□□□ -2.24
LIN7CQ9NUP9 AL603914.1-201ENST00000401964 204 ntBASIC1.06□□□□□ -2.24
LIN7CQ9NUP9 SNORD83.1-201ENST00000411362 77 ntBASIC1.06□□□□□ -2.24
LIN7CQ9NUP9 POLR2J4-204ENST00000418424 324 ntBASIC1.06□□□□□ -2.24
LIN7CQ9NUP9 FABP5P4-201ENST00000437203 171 ntBASIC1.06□□□□□ -2.24
LIN7CQ9NUP9 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
LIN7CQ9NUP9 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.06□□□□□ -2.24
LIN7CQ9NUP9 RNU1-123P-201ENST00000458950 160 ntBASIC1.06□□□□□ -2.24
LIN7CQ9NUP9 Y_RNA.651-201ENST00000459380 103 ntBASIC1.06□□□□□ -2.24
LIN7CQ9NUP9 RNU5E-3P-201ENST00000515913 68 ntBASIC1.06□□□□□ -2.24
LIN7CQ9NUP9 RNU7-200P-201ENST00000516105 62 ntBASIC1.06□□□□□ -2.24
LIN7CQ9NUP9 RNA5SP432-201ENST00000362480 116 ntBASIC1.05□□□□□ -2.24
LIN7CQ9NUP9 RNU6-915P-201ENST00000364943 103 ntBASIC1.05□□□□□ -2.24
LIN7CQ9NUP9 RNU6-1237P-201ENST00000384777 107 ntBASIC1.05□□□□□ -2.24
LIN7CQ9NUP9 RNU6-1165P-201ENST00000410119 107 ntBASIC1.05□□□□□ -2.24
LIN7CQ9NUP9 AC067940.1-201ENST00000458411 300 ntBASIC1.05□□□□□ -2.24
LIN7CQ9NUP9 RNU6-893P-201ENST00000458841 100 ntBASIC1.05□□□□□ -2.24
LIN7CQ9NUP9 Y_RNA.757-201ENST00000578934 114 ntBASIC1.05□□□□□ -2.24
LIN7CQ9NUP9 AC010332.2-201ENST00000613083 1904 ntBASIC1.05□□□□□ -2.24
LIN7CQ9NUP9 RNU6-934P-201ENST00000365154 107 ntBASIC1.04□□□□□ -2.24
LIN7CQ9NUP9 MIR569-201ENST00000385228 96 ntBASIC1.04□□□□□ -2.24
LIN7CQ9NUP9 RNA5SP144-201ENST00000410846 116 ntBASIC1.04□□□□□ -2.24
LIN7CQ9NUP9 AC113410.1-201ENST00000505029 247 ntBASIC1.04□□□□□ -2.24
LIN7CQ9NUP9 RNU6-1258P-201ENST00000516911 111 ntBASIC1.04□□□□□ -2.24
LIN7CQ9NUP9 snoU13.31-201ENST00000607291 104 ntBASIC1.04□□□□□ -2.24
LIN7CQ9NUP9 Y_RNA.171-201ENST00000363760 102 ntBASIC1.03□□□□□ -2.24
LIN7CQ9NUP9 Y_RNA.420-201ENST00000384043 110 ntBASIC1.03□□□□□ -2.24
LIN7CQ9NUP9 Y_RNA.488-201ENST00000384403 102 ntBASIC1.03□□□□□ -2.24
LIN7CQ9NUP9 MIR563-201ENST00000385080 79 ntBASIC1.03□□□□□ -2.24
LIN7CQ9NUP9 SNORD89-201ENST00000390981 114 ntBASIC1.03□□□□□ -2.24
LIN7CQ9NUP9 SNORA40.6-201ENST00000391153 128 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms