Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC012531.4-201ENST00000616509 177 ntBASIC2.13□□□□□ -2.07
CD248Q9HCU0 MIR6132-201ENST00000622083 109 ntBASIC2.13□□□□□ -2.07
CD248Q9HCU0 RNA5SP99-201ENST00000364020 114 ntBASIC2.12□□□□□ -2.07
CD248Q9HCU0 RNU6-1019P-201ENST00000364424 107 ntBASIC2.12□□□□□ -2.07
CD248Q9HCU0 MIR605-201ENST00000385078 83 ntBASIC2.12□□□□□ -2.07
CD248Q9HCU0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CD248Q9HCU0 SUMO2P12-201ENST00000405924 140 ntBASIC2.12□□□□□ -2.07
CD248Q9HCU0 RNU4-69P-201ENST00000410677 143 ntBASIC2.12□□□□□ -2.07
CD248Q9HCU0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.12□□□□□ -2.07
CD248Q9HCU0 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.12□□□□□ -2.07
CD248Q9HCU0 SNORA31.10-201ENST00000516482 106 ntBASIC2.12□□□□□ -2.07
CD248Q9HCU0 AC022254.1-201ENST00000567857 235 ntBASIC2.12□□□□□ -2.07
CD248Q9HCU0 AC012493.3-201ENST00000604494 112 ntBASIC2.12□□□□□ -2.07
CD248Q9HCU0 U7.3-201ENST00000616123 62 ntBASIC2.12□□□□□ -2.07
CD248Q9HCU0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CD248Q9HCU0 SNORA18-201ENST00000384416 132 ntBASIC2.11□□□□□ -2.07
CD248Q9HCU0 AL034345.1-201ENST00000407768 123 ntBASIC2.11□□□□□ -2.07
CD248Q9HCU0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.11□□□□□ -2.07
CD248Q9HCU0 RNU7-45P-201ENST00000459460 63 ntBASIC2.11□□□□□ -2.07
CD248Q9HCU0 RNU6-162P-201ENST00000516228 103 ntBASIC2.11□□□□□ -2.07
CD248Q9HCU0 SNORA44.1-201ENST00000517031 108 ntBASIC2.11□□□□□ -2.07
CD248Q9HCU0 MIR3152-201ENST00000579801 74 ntBASIC2.11□□□□□ -2.07
CD248Q9HCU0 IGLL4P-201ENST00000614590 133 ntBASIC2.11□□□□□ -2.07
CD248Q9HCU0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CD248Q9HCU0 RNU1-58P-201ENST00000362413 163 ntBASIC2.1□□□□□ -2.07
CD248Q9HCU0 RNU6-833P-201ENST00000363486 107 ntBASIC2.1□□□□□ -2.07
CD248Q9HCU0 Y_RNA.171-201ENST00000363760 102 ntBASIC2.1□□□□□ -2.07
CD248Q9HCU0 RNY1P1-201ENST00000364372 112 ntBASIC2.1□□□□□ -2.07
CD248Q9HCU0 SNORA1.2-201ENST00000365189 134 ntBASIC2.1□□□□□ -2.07
CD248Q9HCU0 RNU6-1319P-201ENST00000390855 104 ntBASIC2.1□□□□□ -2.07
CD248Q9HCU0 RNU6-747P-201ENST00000390928 104 ntBASIC2.1□□□□□ -2.07
CD248Q9HCU0 SNORD77B-201ENST00000391112 67 ntBASIC2.1□□□□□ -2.07
CD248Q9HCU0 RNU6-241P-201ENST00000391148 104 ntBASIC2.1□□□□□ -2.07
CD248Q9HCU0 U8.16-201ENST00000391279 133 ntBASIC2.1□□□□□ -2.07
CD248Q9HCU0 SNORA26.9-201ENST00000391322 122 ntBASIC2.1□□□□□ -2.07
CD248Q9HCU0 MIR1283-2-201ENST00000408621 87 ntBASIC2.1□□□□□ -2.07
CD248Q9HCU0 SNORA7.5-201ENST00000410672 110 ntBASIC2.1□□□□□ -2.07
CD248Q9HCU0 RNU6-177P-201ENST00000411257 104 ntBASIC2.1□□□□□ -2.07
CD248Q9HCU0 AC069257.2-201ENST00000441819 155 ntBASIC2.1□□□□□ -2.07
CD248Q9HCU0 RPL23AP63-201ENST00000498752 471 ntBASIC2.1□□□□□ -2.07
CD248Q9HCU0 RNU2-13P-201ENST00000515909 113 ntBASIC2.1□□□□□ -2.07
CD248Q9HCU0 AL442644.1-201ENST00000454390 3105 ntBASIC2.1□□□□□ -2.07
CD248Q9HCU0 Y_RNA.96-201ENST00000363092 109 ntBASIC2.09□□□□□ -2.07
CD248Q9HCU0 SNORD45B-201ENST00000364617 72 ntBASIC2.09□□□□□ -2.07
CD248Q9HCU0 SNORA70.7-201ENST00000384159 133 ntBASIC2.09□□□□□ -2.07
CD248Q9HCU0 RNU6-950P-201ENST00000384651 107 ntBASIC2.09□□□□□ -2.07
CD248Q9HCU0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CD248Q9HCU0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CD248Q9HCU0 RNU11-3P-201ENST00000391111 133 ntBASIC2.09□□□□□ -2.07
CD248Q9HCU0 MRPL35P3-201ENST00000421557 364 ntBASIC2.09□□□□□ -2.07
CD248Q9HCU0 HSPE1P9-201ENST00000440046 311 ntBASIC2.09□□□□□ -2.07
CD248Q9HCU0 AC022137.1-201ENST00000483735 151 ntBASIC2.09□□□□□ -2.07
CD248Q9HCU0 RNU7-12P-201ENST00000516030 62 ntBASIC2.09□□□□□ -2.07
CD248Q9HCU0 RNA5SP168-201ENST00000516642 112 ntBASIC2.09□□□□□ -2.07
CD248Q9HCU0 RNU6-295P-201ENST00000516901 104 ntBASIC2.09□□□□□ -2.07
CD248Q9HCU0 MIR5094-201ENST00000578766 85 ntBASIC2.09□□□□□ -2.07
CD248Q9HCU0 MIR548Z-201ENST00000584743 97 ntBASIC2.09□□□□□ -2.07
CD248Q9HCU0 MIR6845-201ENST00000613182 61 ntBASIC2.09□□□□□ -2.07
CD248Q9HCU0 WWP1P1-201ENST00000466609 2769 ntBASIC2.08□□□□□ -2.08
CD248Q9HCU0 SNORA22.1-201ENST00000362701 134 ntBASIC2.08□□□□□ -2.08
CD248Q9HCU0 SNORD115-2-201ENST00000362842 82 ntBASIC2.08□□□□□ -2.08
CD248Q9HCU0 RNU6-60P-201ENST00000364792 103 ntBASIC2.08□□□□□ -2.08
CD248Q9HCU0 SNORD115-20-201ENST00000365099 82 ntBASIC2.08□□□□□ -2.08
CD248Q9HCU0 Y_RNA.370-201ENST00000365589 108 ntBASIC2.08□□□□□ -2.08
CD248Q9HCU0 RNU6-616P-201ENST00000384353 107 ntBASIC2.08□□□□□ -2.08
CD248Q9HCU0 MIR516B2-201ENST00000385190 85 ntBASIC2.08□□□□□ -2.08
CD248Q9HCU0 RNU6-679P-201ENST00000391003 106 ntBASIC2.08□□□□□ -2.08
CD248Q9HCU0 AL353813.1-201ENST00000440700 253 ntBASIC2.08□□□□□ -2.08
CD248Q9HCU0 RNA5SP33-201ENST00000516687 98 ntBASIC2.08□□□□□ -2.08
CD248Q9HCU0 RNU6-1258P-201ENST00000516911 111 ntBASIC2.08□□□□□ -2.08
CD248Q9HCU0 MIR3198-2-201ENST00000577868 80 ntBASIC2.08□□□□□ -2.08
CD248Q9HCU0 RNU6-228P-201ENST00000362700 106 ntBASIC2.07□□□□□ -2.08
CD248Q9HCU0 Y_RNA.377-201ENST00000365644 108 ntBASIC2.07□□□□□ -2.08
CD248Q9HCU0 RNU6-1124P-201ENST00000384169 107 ntBASIC2.07□□□□□ -2.08
CD248Q9HCU0 AL451046.2-201ENST00000403074 277 ntBASIC2.07□□□□□ -2.08
CD248Q9HCU0 RNA5SP261-201ENST00000410536 106 ntBASIC2.07□□□□□ -2.08
CD248Q9HCU0 RPL31P63-201ENST00000422565 375 ntBASIC2.07□□□□□ -2.08
CD248Q9HCU0 BX510359.4-201ENST00000423750 193 ntBASIC2.07□□□□□ -2.08
CD248Q9HCU0 RNU7-67P-201ENST00000459003 62 ntBASIC2.07□□□□□ -2.08
CD248Q9HCU0 Y_RNA.659-201ENST00000515994 113 ntBASIC2.07□□□□□ -2.08
CD248Q9HCU0 RNU7-53P-201ENST00000516705 60 ntBASIC2.07□□□□□ -2.08
CD248Q9HCU0 RNU6-958P-201ENST00000516995 106 ntBASIC2.07□□□□□ -2.08
CD248Q9HCU0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.07□□□□□ -2.08
CD248Q9HCU0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.07□□□□□ -2.08
CD248Q9HCU0 MIR548AE2-201ENST00000583456 67 ntBASIC2.07□□□□□ -2.08
CD248Q9HCU0 MIR4777-201ENST00000583710 86 ntBASIC2.07□□□□□ -2.08
CD248Q9HCU0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.07□□□□□ -2.08
CD248Q9HCU0 MIR3202-2-201ENST00000635980 79 ntBASIC2.07□□□□□ -2.08
CD248Q9HCU0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.07□□□□□ -2.08
CD248Q9HCU0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
CD248Q9HCU0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CD248Q9HCU0 Y_RNA.470-201ENST00000384307 117 ntBASIC2.06□□□□□ -2.08
CD248Q9HCU0 RNU6-242P-201ENST00000384359 107 ntBASIC2.06□□□□□ -2.08
CD248Q9HCU0 MIR452-201ENST00000385020 85 ntBASIC2.06□□□□□ -2.08
CD248Q9HCU0 BTF3P4-201ENST00000418852 495 ntBASIC2.06□□□□□ -2.08
CD248Q9HCU0 RPL39P39-201ENST00000455840 151 ntBASIC2.06□□□□□ -2.08
CD248Q9HCU0 AC008834.1-201ENST00000511612 175 ntBASIC2.06□□□□□ -2.08
CD248Q9HCU0 RNU6-1018P-201ENST00000516577 106 ntBASIC2.06□□□□□ -2.08
CD248Q9HCU0 Y_RNA.783-201ENST00000613546 102 ntBASIC2.06□□□□□ -2.08
CD248Q9HCU0 AC091304.10-201ENST00000641554 121 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 219 ms