Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 FAM71BP1-201ENST00000604431 523 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 Y_RNA.783-201ENST00000613546 102 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 MIR2052-201ENST00000636055 55 ntBASIC2.16□□□□□ -2.06
RNF38Q9H0F5 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.16□□□□□ -2.06
RNF38Q9H0F5 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
RNF38Q9H0F5 Y_RNA.360-201ENST00000365512 102 ntBASIC2.15□□□□□ -2.07
RNF38Q9H0F5 MIR577-201ENST00000385196 96 ntBASIC2.15□□□□□ -2.07
RNF38Q9H0F5 MIR660-201ENST00000385235 97 ntBASIC2.15□□□□□ -2.07
RNF38Q9H0F5 MIR764-201ENST00000390811 85 ntBASIC2.15□□□□□ -2.07
RNF38Q9H0F5 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.15□□□□□ -2.07
RNF38Q9H0F5 HMGN1P33-201ENST00000432945 451 ntBASIC2.15□□□□□ -2.07
RNF38Q9H0F5 AC104435.1-201ENST00000483483 166 ntBASIC2.15□□□□□ -2.07
RNF38Q9H0F5 AC243994.1-201ENST00000618627 109 ntBASIC2.15□□□□□ -2.07
RNF38Q9H0F5 RNU6-363P-201ENST00000362895 105 ntBASIC2.14□□□□□ -2.07
RNF38Q9H0F5 RNU6-1134P-201ENST00000365156 101 ntBASIC2.14□□□□□ -2.07
RNF38Q9H0F5 SNORA26.6-201ENST00000391256 115 ntBASIC2.14□□□□□ -2.07
RNF38Q9H0F5 AL591806.2-201ENST00000433122 173 ntBASIC2.14□□□□□ -2.07
RNF38Q9H0F5 MIR1270-201ENST00000459320 83 ntBASIC2.14□□□□□ -2.07
RNF38Q9H0F5 RNU7-61P-201ENST00000515897 61 ntBASIC2.14□□□□□ -2.07
RNF38Q9H0F5 MIR3152-201ENST00000579801 74 ntBASIC2.14□□□□□ -2.07
RNF38Q9H0F5 MIR548Z-201ENST00000584743 97 ntBASIC2.14□□□□□ -2.07
RNF38Q9H0F5 FAM106DP-201ENST00000586416 501 ntBASIC2.14□□□□□ -2.07
RNF38Q9H0F5 AL513423.1-201ENST00000621695 132 ntBASIC2.14□□□□□ -2.07
RNF38Q9H0F5 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.14□□□□□ -2.07
RNF38Q9H0F5 MIR6841-201ENST00000637129 72 ntBASIC2.14□□□□□ -2.07
RNF38Q9H0F5 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
RNF38Q9H0F5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
RNF38Q9H0F5 RNU6-457P-201ENST00000363999 107 ntBASIC2.13□□□□□ -2.07
RNF38Q9H0F5 Y_RNA.299-201ENST00000364973 94 ntBASIC2.13□□□□□ -2.07
RNF38Q9H0F5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
RNF38Q9H0F5 SNORD77B-201ENST00000391112 67 ntBASIC2.13□□□□□ -2.07
RNF38Q9H0F5 AL353813.1-201ENST00000440700 253 ntBASIC2.13□□□□□ -2.07
RNF38Q9H0F5 RNU6-162P-201ENST00000516228 103 ntBASIC2.13□□□□□ -2.07
RNF38Q9H0F5 MIR4694-201ENST00000578534 80 ntBASIC2.13□□□□□ -2.07
RNF38Q9H0F5 AL020996.3-201ENST00000606617 222 ntBASIC2.13□□□□□ -2.07
RNF38Q9H0F5 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.13□□□□□ -2.07
RNF38Q9H0F5 AC012531.4-201ENST00000616509 177 ntBASIC2.13□□□□□ -2.07
RNF38Q9H0F5 MIR6717-201ENST00000622747 73 ntBASIC2.13□□□□□ -2.07
RNF38Q9H0F5 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RNF38Q9H0F5 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
RNF38Q9H0F5 RNU6-832P-201ENST00000363319 107 ntBASIC2.12□□□□□ -2.07
RNF38Q9H0F5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
RNF38Q9H0F5 RNU6-679P-201ENST00000391003 106 ntBASIC2.12□□□□□ -2.07
RNF38Q9H0F5 Y_RNA.601-201ENST00000410500 113 ntBASIC2.12□□□□□ -2.07
RNF38Q9H0F5 RNU6-893P-201ENST00000458841 100 ntBASIC2.12□□□□□ -2.07
RNF38Q9H0F5 RNU2-13P-201ENST00000515909 113 ntBASIC2.12□□□□□ -2.07
RNF38Q9H0F5 DNAJC19P9-201ENST00000555084 351 ntBASIC2.12□□□□□ -2.07
RNF38Q9H0F5 AC015712.3-201ENST00000559380 164 ntBASIC2.12□□□□□ -2.07
RNF38Q9H0F5 MIR4524B-201ENST00000581569 115 ntBASIC2.12□□□□□ -2.07
RNF38Q9H0F5 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
RNF38Q9H0F5 MIR494-201ENST00000349529 81 ntBASIC2.11□□□□□ -2.07
RNF38Q9H0F5 Y_RNA.10-201ENST00000362371 110 ntBASIC2.11□□□□□ -2.07
RNF38Q9H0F5 RNA5SP173-201ENST00000364857 136 ntBASIC2.11□□□□□ -2.07
RNF38Q9H0F5 RNA5SP37-201ENST00000365420 130 ntBASIC2.11□□□□□ -2.07
RNF38Q9H0F5 Y_RNA.466-201ENST00000384294 113 ntBASIC2.11□□□□□ -2.07
RNF38Q9H0F5 U8.13-201ENST00000390842 128 ntBASIC2.11□□□□□ -2.07
RNF38Q9H0F5 RNU6-644P-201ENST00000391155 98 ntBASIC2.11□□□□□ -2.07
RNF38Q9H0F5 HMGN2P19-201ENST00000425149 265 ntBASIC2.11□□□□□ -2.07
RNF38Q9H0F5 snoU13.23-201ENST00000458863 104 ntBASIC2.11□□□□□ -2.07
RNF38Q9H0F5 RPL23AP42-201ENST00000471152 471 ntBASIC2.11□□□□□ -2.07
RNF38Q9H0F5 MIR514B-201ENST00000516774 80 ntBASIC2.11□□□□□ -2.07
RNF38Q9H0F5 AC026421.1-201ENST00000519101 163 ntBASIC2.11□□□□□ -2.07
RNF38Q9H0F5 RNU6-170P-201ENST00000362832 104 ntBASIC2.1□□□□□ -2.07
RNF38Q9H0F5 Y_RNA.290-201ENST00000364879 114 ntBASIC2.1□□□□□ -2.07
RNF38Q9H0F5 SNORA24-201ENST00000384096 131 ntBASIC2.1□□□□□ -2.07
RNF38Q9H0F5 SNRPGP19-201ENST00000603826 189 ntBASIC2.1□□□□□ -2.07
RNF38Q9H0F5 AC091304.10-201ENST00000641554 121 ntBASIC2.1□□□□□ -2.07
RNF38Q9H0F5 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
RNF38Q9H0F5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
RNF38Q9H0F5 MIR424-201ENST00000362227 98 ntBASIC2.09□□□□□ -2.07
RNF38Q9H0F5 SNORD115-2-201ENST00000362842 82 ntBASIC2.09□□□□□ -2.07
RNF38Q9H0F5 SNORD115-20-201ENST00000365099 82 ntBASIC2.09□□□□□ -2.07
RNF38Q9H0F5 RNU6-439P-201ENST00000384188 106 ntBASIC2.09□□□□□ -2.07
RNF38Q9H0F5 MIR676-201ENST00000390702 67 ntBASIC2.09□□□□□ -2.07
RNF38Q9H0F5 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.09□□□□□ -2.07
RNF38Q9H0F5 RNA5SP261-201ENST00000410536 106 ntBASIC2.09□□□□□ -2.07
RNF38Q9H0F5 RNU7-73P-201ENST00000458743 63 ntBASIC2.09□□□□□ -2.07
RNF38Q9H0F5 Y_RNA.659-201ENST00000515994 113 ntBASIC2.09□□□□□ -2.07
RNF38Q9H0F5 RN7SKP12-201ENST00000516275 143 ntBASIC2.09□□□□□ -2.07
RNF38Q9H0F5 RNU6-521P-201ENST00000516663 105 ntBASIC2.09□□□□□ -2.07
RNF38Q9H0F5 MIR5089-201ENST00000580047 84 ntBASIC2.09□□□□□ -2.07
RNF38Q9H0F5 AL096840.1-201ENST00000603287 93 ntBASIC2.09□□□□□ -2.07
RNF38Q9H0F5 U7.3-201ENST00000616123 62 ntBASIC2.09□□□□□ -2.07
RNF38Q9H0F5 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
RNF38Q9H0F5 RNA5SP138-201ENST00000365098 114 ntBASIC2.08□□□□□ -2.08
RNF38Q9H0F5 RNU6-573P-201ENST00000383938 106 ntBASIC2.08□□□□□ -2.08
RNF38Q9H0F5 AC004941.2-201ENST00000427009 228 ntBASIC2.08□□□□□ -2.08
RNF38Q9H0F5 MIR4769-201ENST00000584126 77 ntBASIC2.08□□□□□ -2.08
RNF38Q9H0F5 AC103810.8-201ENST00000607347 118 ntBASIC2.08□□□□□ -2.08
RNF38Q9H0F5 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
RNF38Q9H0F5 SNORA1.1-201ENST00000364671 133 ntBASIC2.07□□□□□ -2.08
RNF38Q9H0F5 SNORA18-201ENST00000384416 132 ntBASIC2.07□□□□□ -2.08
RNF38Q9H0F5 RNU6-342P-201ENST00000384521 104 ntBASIC2.07□□□□□ -2.08
RNF38Q9H0F5 MIR450A2-201ENST00000385022 100 ntBASIC2.07□□□□□ -2.08
RNF38Q9H0F5 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
RNF38Q9H0F5 RNA5SP338-201ENST00000410495 85 ntBASIC2.07□□□□□ -2.08
RNF38Q9H0F5 RNU6-592P-201ENST00000411333 103 ntBASIC2.07□□□□□ -2.08
RNF38Q9H0F5 RNA5SP364-201ENST00000516938 78 ntBASIC2.07□□□□□ -2.08
RNF38Q9H0F5 DEFB122-202ENST00000569013 197 ntBASIC2.07□□□□□ -2.08
RNF38Q9H0F5 uc_338.20-201ENST00000621563 178 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms