Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RNU6-241P-201ENST00000391148 104 ntBASIC1.6□□□□□ -2.15
AMBRA1Q9C0C7 RNA5SP136-201ENST00000410906 107 ntBASIC1.6□□□□□ -2.15
AMBRA1Q9C0C7 RNU6-177P-201ENST00000411257 104 ntBASIC1.6□□□□□ -2.15
AMBRA1Q9C0C7 AC079140.2-201ENST00000506193 142 ntBASIC1.6□□□□□ -2.15
AMBRA1Q9C0C7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.6□□□□□ -2.15
AMBRA1Q9C0C7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.6□□□□□ -2.15
AMBRA1Q9C0C7 AC021443.1-201ENST00000604478 211 ntBASIC1.6□□□□□ -2.15
AMBRA1Q9C0C7 AC025166.1-201ENST00000612411 163 ntBASIC1.6□□□□□ -2.15
AMBRA1Q9C0C7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
AMBRA1Q9C0C7 AC021613.1-201ENST00000623880 111 ntBASIC1.6□□□□□ -2.15
AMBRA1Q9C0C7 RNU6-913P-201ENST00000390913 95 ntBASIC1.59□□□□□ -2.15
AMBRA1Q9C0C7 RNA5SP261-201ENST00000410536 106 ntBASIC1.59□□□□□ -2.15
AMBRA1Q9C0C7 Y_RNA.629-201ENST00000411368 105 ntBASIC1.59□□□□□ -2.15
AMBRA1Q9C0C7 RPL31P63-201ENST00000422565 375 ntBASIC1.59□□□□□ -2.15
AMBRA1Q9C0C7 SNORD13-201ENST00000459299 104 ntBASIC1.59□□□□□ -2.15
AMBRA1Q9C0C7 RNU7-45P-201ENST00000459460 63 ntBASIC1.59□□□□□ -2.15
AMBRA1Q9C0C7 RNU6-250P-201ENST00000516958 103 ntBASIC1.59□□□□□ -2.15
AMBRA1Q9C0C7 MIR3198-2-201ENST00000577868 80 ntBASIC1.59□□□□□ -2.15
AMBRA1Q9C0C7 MIR3683-201ENST00000580847 82 ntBASIC1.59□□□□□ -2.15
AMBRA1Q9C0C7 MIR4305-201ENST00000583252 102 ntBASIC1.59□□□□□ -2.15
AMBRA1Q9C0C7 MIR8055-201ENST00000610739 97 ntBASIC1.59□□□□□ -2.15
AMBRA1Q9C0C7 U6.95-201ENST00000636931 70 ntBASIC1.59□□□□□ -2.15
AMBRA1Q9C0C7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
AMBRA1Q9C0C7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
AMBRA1Q9C0C7 Y_RNA.273-201ENST00000364703 102 ntBASIC1.58□□□□□ -2.16
AMBRA1Q9C0C7 Y_RNA.528-201ENST00000384575 108 ntBASIC1.58□□□□□ -2.16
AMBRA1Q9C0C7 RNU6-735P-201ENST00000410612 107 ntBASIC1.58□□□□□ -2.16
AMBRA1Q9C0C7 RNU7-164P-201ENST00000459221 62 ntBASIC1.58□□□□□ -2.16
AMBRA1Q9C0C7 AC008834.1-201ENST00000511612 175 ntBASIC1.58□□□□□ -2.16
AMBRA1Q9C0C7 RNU7-41P-201ENST00000515917 61 ntBASIC1.58□□□□□ -2.16
AMBRA1Q9C0C7 DNAJC19P9-201ENST00000555084 351 ntBASIC1.58□□□□□ -2.16
AMBRA1Q9C0C7 MTND5P18-201ENST00000445624 1801 ntBASIC1.58□□□□□ -2.16
AMBRA1Q9C0C7 RNU6-834P-201ENST00000362367 110 ntBASIC1.57□□□□□ -2.16
AMBRA1Q9C0C7 RNU4-16P-201ENST00000364737 141 ntBASIC1.57□□□□□ -2.16
AMBRA1Q9C0C7 Y_RNA.298-201ENST00000364960 107 ntBASIC1.57□□□□□ -2.16
AMBRA1Q9C0C7 RNU1-78P-201ENST00000391248 165 ntBASIC1.57□□□□□ -2.16
AMBRA1Q9C0C7 RNU6-893P-201ENST00000458841 100 ntBASIC1.57□□□□□ -2.16
AMBRA1Q9C0C7 RNU6-947P-201ENST00000516264 106 ntBASIC1.57□□□□□ -2.16
AMBRA1Q9C0C7 AL020996.3-201ENST00000606617 222 ntBASIC1.57□□□□□ -2.16
AMBRA1Q9C0C7 AL512598.1-201ENST00000610158 273 ntBASIC1.57□□□□□ -2.16
AMBRA1Q9C0C7 MIR6717-201ENST00000622747 73 ntBASIC1.57□□□□□ -2.16
AMBRA1Q9C0C7 MIR4251-201ENST00000635819 61 ntBASIC1.57□□□□□ -2.16
AMBRA1Q9C0C7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
AMBRA1Q9C0C7 Y_RNA.353-201ENST00000365440 108 ntBASIC1.56□□□□□ -2.16
AMBRA1Q9C0C7 SNORA17.3-201ENST00000391159 129 ntBASIC1.56□□□□□ -2.16
AMBRA1Q9C0C7 SNORA26.6-201ENST00000391256 115 ntBASIC1.56□□□□□ -2.16
AMBRA1Q9C0C7 RNA5SP144-201ENST00000410846 116 ntBASIC1.56□□□□□ -2.16
AMBRA1Q9C0C7 BX248123.2-201ENST00000606318 124 ntBASIC1.56□□□□□ -2.16
AMBRA1Q9C0C7 MIR502-201ENST00000606349 86 ntBASIC1.56□□□□□ -2.16
AMBRA1Q9C0C7 AC084768.2-201ENST00000622736 221 ntBASIC1.56□□□□□ -2.16
AMBRA1Q9C0C7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
AMBRA1Q9C0C7 RNU6-1056P-201ENST00000383996 107 ntBASIC1.55□□□□□ -2.16
AMBRA1Q9C0C7 RNU6-1065P-201ENST00000384513 106 ntBASIC1.55□□□□□ -2.16
AMBRA1Q9C0C7 MIR7-2-201ENST00000384970 110 ntBASIC1.55□□□□□ -2.16
AMBRA1Q9C0C7 MIR934-201ENST00000401241 83 ntBASIC1.55□□□□□ -2.16
AMBRA1Q9C0C7 AL022718.1-201ENST00000412004 84 ntBASIC1.55□□□□□ -2.16
AMBRA1Q9C0C7 AP1B1P2-201ENST00000416196 106 ntBASIC1.55□□□□□ -2.16
AMBRA1Q9C0C7 AC027119.1-201ENST00000440877 241 ntBASIC1.55□□□□□ -2.16
AMBRA1Q9C0C7 COX6CP6-201ENST00000490840 228 ntBASIC1.55□□□□□ -2.16
AMBRA1Q9C0C7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.55□□□□□ -2.16
AMBRA1Q9C0C7 SNORD111.1-201ENST00000516421 86 ntBASIC1.55□□□□□ -2.16
AMBRA1Q9C0C7 RNU2-35P-201ENST00000516446 142 ntBASIC1.55□□□□□ -2.16
AMBRA1Q9C0C7 RNY4P20-201ENST00000516678 93 ntBASIC1.55□□□□□ -2.16
AMBRA1Q9C0C7 AC019176.1-201ENST00000518519 225 ntBASIC1.55□□□□□ -2.16
AMBRA1Q9C0C7 MIR3937-201ENST00000580135 106 ntBASIC1.55□□□□□ -2.16
AMBRA1Q9C0C7 MIR3192-201ENST00000584920 77 ntBASIC1.55□□□□□ -2.16
AMBRA1Q9C0C7 AL096861.1-201ENST00000610899 123 ntBASIC1.55□□□□□ -2.16
AMBRA1Q9C0C7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
AMBRA1Q9C0C7 Y_RNA.430-201ENST00000384081 110 ntBASIC1.54□□□□□ -2.16
AMBRA1Q9C0C7 MIR548A3-201ENST00000385297 97 ntBASIC1.54□□□□□ -2.16
AMBRA1Q9C0C7 RNU6-1064P-201ENST00000410626 104 ntBASIC1.54□□□□□ -2.16
AMBRA1Q9C0C7 RNU6-1190P-201ENST00000410811 104 ntBASIC1.54□□□□□ -2.16
AMBRA1Q9C0C7 RPS3AP1-201ENST00000413190 320 ntBASIC1.54□□□□□ -2.16
AMBRA1Q9C0C7 POLR2J4-204ENST00000418424 324 ntBASIC1.54□□□□□ -2.16
AMBRA1Q9C0C7 RPL39P39-201ENST00000455840 151 ntBASIC1.54□□□□□ -2.16
AMBRA1Q9C0C7 AL133373.1-201ENST00000497098 94 ntBASIC1.54□□□□□ -2.16
AMBRA1Q9C0C7 MIR548AO-201ENST00000579992 96 ntBASIC1.54□□□□□ -2.16
AMBRA1Q9C0C7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.54□□□□□ -2.16
AMBRA1Q9C0C7 AL121890.5-201ENST00000620848 304 ntBASIC1.54□□□□□ -2.16
AMBRA1Q9C0C7 Y_RNA.198-201ENST00000364013 98 ntBASIC1.53□□□□□ -2.16
AMBRA1Q9C0C7 SNORA1.1-201ENST00000364671 133 ntBASIC1.53□□□□□ -2.16
AMBRA1Q9C0C7 RNU6-42P-201ENST00000384165 107 ntBASIC1.53□□□□□ -2.16
AMBRA1Q9C0C7 MIR759-201ENST00000390224 91 ntBASIC1.53□□□□□ -2.16
AMBRA1Q9C0C7 AC009474.2-201ENST00000451383 136 ntBASIC1.53□□□□□ -2.16
AMBRA1Q9C0C7 RNU7-123P-201ENST00000515911 60 ntBASIC1.53□□□□□ -2.16
AMBRA1Q9C0C7 AC004812.1-201ENST00000540773 146 ntBASIC1.53□□□□□ -2.16
AMBRA1Q9C0C7 MIR3664-201ENST00000579074 99 ntBASIC1.53□□□□□ -2.16
AMBRA1Q9C0C7 AL078603.1-201ENST00000603824 313 ntBASIC1.53□□□□□ -2.16
AMBRA1Q9C0C7 AL670379.3-201ENST00000605040 251 ntBASIC1.53□□□□□ -2.16
AMBRA1Q9C0C7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
AMBRA1Q9C0C7 Z97988.1-201ENST00000637697 135 ntBASIC1.53□□□□□ -2.16
AMBRA1Q9C0C7 RNA5SP48-201ENST00000363969 126 ntBASIC1.52□□□□□ -2.17
AMBRA1Q9C0C7 Y_RNA.354-201ENST00000365448 111 ntBASIC1.52□□□□□ -2.17
AMBRA1Q9C0C7 RNU6-1144P-201ENST00000384247 104 ntBASIC1.52□□□□□ -2.17
AMBRA1Q9C0C7 Y_RNA.531-201ENST00000384589 121 ntBASIC1.52□□□□□ -2.17
AMBRA1Q9C0C7 RNU6-476P-201ENST00000384726 107 ntBASIC1.52□□□□□ -2.17
AMBRA1Q9C0C7 RNU4-62P-201ENST00000410125 130 ntBASIC1.52□□□□□ -2.17
AMBRA1Q9C0C7 AL512326.2-201ENST00000426359 151 ntBASIC1.52□□□□□ -2.17
AMBRA1Q9C0C7 HMGN1P33-201ENST00000432945 451 ntBASIC1.52□□□□□ -2.17
AMBRA1Q9C0C7 Y_RNA.649-201ENST00000459077 103 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 182.7 ms