Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 MIR221-201ENST00000385135 110 ntBASIC2.2□□□□□ -2.06
FOXP3Q9BZS1 snoU13.23-201ENST00000458863 104 ntBASIC2.2□□□□□ -2.06
FOXP3Q9BZS1 MIR548AE2-201ENST00000583456 67 ntBASIC2.2□□□□□ -2.06
FOXP3Q9BZS1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
FOXP3Q9BZS1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
FOXP3Q9BZS1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
FOXP3Q9BZS1 SNORD114-1-201ENST00000362705 72 ntBASIC2.19□□□□□ -2.06
FOXP3Q9BZS1 SNORA16B-201ENST00000364674 135 ntBASIC2.19□□□□□ -2.06
FOXP3Q9BZS1 Y_RNA.466-201ENST00000384294 113 ntBASIC2.19□□□□□ -2.06
FOXP3Q9BZS1 SNORA64-201ENST00000384674 134 ntBASIC2.19□□□□□ -2.06
FOXP3Q9BZS1 MIR1270-201ENST00000459320 83 ntBASIC2.19□□□□□ -2.06
FOXP3Q9BZS1 snoU13.16-201ENST00000459350 104 ntBASIC2.19□□□□□ -2.06
FOXP3Q9BZS1 RNA5SP33-201ENST00000516687 98 ntBASIC2.19□□□□□ -2.06
FOXP3Q9BZS1 MIR4694-201ENST00000578534 80 ntBASIC2.19□□□□□ -2.06
FOXP3Q9BZS1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
FOXP3Q9BZS1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
FOXP3Q9BZS1 RNY3P2-201ENST00000362918 102 ntBASIC2.18□□□□□ -2.06
FOXP3Q9BZS1 Y_RNA.107-201ENST00000363190 121 ntBASIC2.18□□□□□ -2.06
FOXP3Q9BZS1 Y_RNA.155-201ENST00000363632 101 ntBASIC2.18□□□□□ -2.06
FOXP3Q9BZS1 RNA5SP138-201ENST00000365098 114 ntBASIC2.18□□□□□ -2.06
FOXP3Q9BZS1 Y_RNA.360-201ENST00000365512 102 ntBASIC2.18□□□□□ -2.06
FOXP3Q9BZS1 RNU6-409P-201ENST00000384114 104 ntBASIC2.18□□□□□ -2.06
FOXP3Q9BZS1 RNU6-733P-201ENST00000410759 104 ntBASIC2.18□□□□□ -2.06
FOXP3Q9BZS1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.18□□□□□ -2.06
FOXP3Q9BZS1 AC108210.2-201ENST00000503681 201 ntBASIC2.18□□□□□ -2.06
FOXP3Q9BZS1 SCARNA23-201ENST00000516060 130 ntBASIC2.18□□□□□ -2.06
FOXP3Q9BZS1 RNU7-43P-201ENST00000516554 64 ntBASIC2.18□□□□□ -2.06
FOXP3Q9BZS1 AC015712.3-201ENST00000559380 164 ntBASIC2.18□□□□□ -2.06
FOXP3Q9BZS1 FAM71BP1-201ENST00000604431 523 ntBASIC2.18□□□□□ -2.06
FOXP3Q9BZS1 MIR8055-201ENST00000610739 97 ntBASIC2.18□□□□□ -2.06
FOXP3Q9BZS1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
FOXP3Q9BZS1 SNORD73B-201ENST00000364394 72 ntBASIC2.17□□□□□ -2.06
FOXP3Q9BZS1 SNORA67.3-201ENST00000384366 140 ntBASIC2.17□□□□□ -2.06
FOXP3Q9BZS1 MIR194-1-201ENST00000384892 85 ntBASIC2.17□□□□□ -2.06
FOXP3Q9BZS1 MIR577-201ENST00000385196 96 ntBASIC2.17□□□□□ -2.06
FOXP3Q9BZS1 SNORD77B-201ENST00000391112 67 ntBASIC2.17□□□□□ -2.06
FOXP3Q9BZS1 Y_RNA.601-201ENST00000410500 113 ntBASIC2.17□□□□□ -2.06
FOXP3Q9BZS1 AL353813.1-201ENST00000440700 253 ntBASIC2.17□□□□□ -2.06
FOXP3Q9BZS1 RNU6-917P-201ENST00000516294 104 ntBASIC2.17□□□□□ -2.06
FOXP3Q9BZS1 RNU2-19P-201ENST00000517288 84 ntBASIC2.17□□□□□ -2.06
FOXP3Q9BZS1 DEFB122-202ENST00000569013 197 ntBASIC2.17□□□□□ -2.06
FOXP3Q9BZS1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
FOXP3Q9BZS1 Y_RNA.10-201ENST00000362371 110 ntBASIC2.16□□□□□ -2.06
FOXP3Q9BZS1 Y_RNA.220-201ENST00000364244 109 ntBASIC2.16□□□□□ -2.06
FOXP3Q9BZS1 RNU6-203P-201ENST00000384038 104 ntBASIC2.16□□□□□ -2.06
FOXP3Q9BZS1 RNU6-616P-201ENST00000384353 107 ntBASIC2.16□□□□□ -2.06
FOXP3Q9BZS1 Y_RNA.558-201ENST00000384685 113 ntBASIC2.16□□□□□ -2.06
FOXP3Q9BZS1 RPS3AP1-201ENST00000413190 320 ntBASIC2.16□□□□□ -2.06
FOXP3Q9BZS1 AL096840.1-201ENST00000603287 93 ntBASIC2.16□□□□□ -2.06
FOXP3Q9BZS1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
FOXP3Q9BZS1 RNU6-832P-201ENST00000363319 107 ntBASIC2.15□□□□□ -2.07
FOXP3Q9BZS1 RNA5SP160-201ENST00000364866 120 ntBASIC2.15□□□□□ -2.07
FOXP3Q9BZS1 MIR605-201ENST00000385078 83 ntBASIC2.15□□□□□ -2.07
FOXP3Q9BZS1 AL023284.1-201ENST00000403956 276 ntBASIC2.15□□□□□ -2.07
FOXP3Q9BZS1 RNA5SP338-201ENST00000410495 85 ntBASIC2.15□□□□□ -2.07
FOXP3Q9BZS1 HMGN1P33-201ENST00000432945 451 ntBASIC2.15□□□□□ -2.07
FOXP3Q9BZS1 AC055731.1-201ENST00000474387 401 ntBASIC2.15□□□□□ -2.07
FOXP3Q9BZS1 MIR4764-201ENST00000580680 88 ntBASIC2.15□□□□□ -2.07
FOXP3Q9BZS1 MIR4448-201ENST00000584360 86 ntBASIC2.15□□□□□ -2.07
FOXP3Q9BZS1 MALAT1.1-201ENST00000618249 95 ntBASIC2.15□□□□□ -2.07
FOXP3Q9BZS1 AC008133.2-201ENST00000624540 351 ntBASIC2.15□□□□□ -2.07
FOXP3Q9BZS1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.14□□□□□ -2.07
FOXP3Q9BZS1 RNA5SP99-201ENST00000364020 114 ntBASIC2.14□□□□□ -2.07
FOXP3Q9BZS1 SNORA1.1-201ENST00000364671 133 ntBASIC2.14□□□□□ -2.07
FOXP3Q9BZS1 RNU6-679P-201ENST00000391003 106 ntBASIC2.14□□□□□ -2.07
FOXP3Q9BZS1 RNA5SP57-201ENST00000459463 123 ntBASIC2.14□□□□□ -2.07
FOXP3Q9BZS1 RNU6-1018P-201ENST00000516577 106 ntBASIC2.14□□□□□ -2.07
FOXP3Q9BZS1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.14□□□□□ -2.07
FOXP3Q9BZS1 MIR3935-201ENST00000583472 104 ntBASIC2.14□□□□□ -2.07
FOXP3Q9BZS1 AL442128.1-201ENST00000615151 90 ntBASIC2.14□□□□□ -2.07
FOXP3Q9BZS1 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.14□□□□□ -2.07
FOXP3Q9BZS1 Z97988.1-201ENST00000637697 135 ntBASIC2.14□□□□□ -2.07
FOXP3Q9BZS1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.13□□□□□ -2.07
FOXP3Q9BZS1 Y_RNA.342-201ENST00000365352 113 ntBASIC2.13□□□□□ -2.07
FOXP3Q9BZS1 Y_RNA.377-201ENST00000365644 108 ntBASIC2.13□□□□□ -2.07
FOXP3Q9BZS1 MIR653-201ENST00000385279 96 ntBASIC2.13□□□□□ -2.07
FOXP3Q9BZS1 AC096949.1-201ENST00000412047 152 ntBASIC2.13□□□□□ -2.07
FOXP3Q9BZS1 AC004965.1-201ENST00000413033 213 ntBASIC2.13□□□□□ -2.07
FOXP3Q9BZS1 AL161935.2-201ENST00000414627 60 ntBASIC2.13□□□□□ -2.07
FOXP3Q9BZS1 RNU6-844P-201ENST00000517175 102 ntBASIC2.13□□□□□ -2.07
FOXP3Q9BZS1 AL627230.6-201ENST00000611129 280 ntBASIC2.13□□□□□ -2.07
FOXP3Q9BZS1 RNY1P7-201ENST00000384743 110 ntBASIC2.12□□□□□ -2.07
FOXP3Q9BZS1 SNORA7.5-201ENST00000410672 110 ntBASIC2.12□□□□□ -2.07
FOXP3Q9BZS1 MIR8065-201ENST00000620577 100 ntBASIC2.12□□□□□ -2.07
FOXP3Q9BZS1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
FOXP3Q9BZS1 SNORA32-201ENST00000384072 121 ntBASIC2.11□□□□□ -2.07
FOXP3Q9BZS1 MIR520C-201ENST00000385005 87 ntBASIC2.11□□□□□ -2.07
FOXP3Q9BZS1 RNU2-40P-201ENST00000410833 196 ntBASIC2.11□□□□□ -2.07
FOXP3Q9BZS1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
FOXP3Q9BZS1 Y_RNA.354-201ENST00000365448 111 ntBASIC2.1□□□□□ -2.07
FOXP3Q9BZS1 RNU6-1201P-201ENST00000384227 107 ntBASIC2.1□□□□□ -2.07
FOXP3Q9BZS1 SUMO2P12-201ENST00000405924 140 ntBASIC2.1□□□□□ -2.07
FOXP3Q9BZS1 AC004941.2-201ENST00000427009 228 ntBASIC2.1□□□□□ -2.07
FOXP3Q9BZS1 RNU6-521P-201ENST00000516663 105 ntBASIC2.1□□□□□ -2.07
FOXP3Q9BZS1 RNU6-762P-201ENST00000517107 102 ntBASIC2.1□□□□□ -2.07
FOXP3Q9BZS1 MIR219B-201ENST00000637023 88 ntBASIC2.1□□□□□ -2.07
FOXP3Q9BZS1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.1□□□□□ -2.07
FOXP3Q9BZS1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.1□□□□□ -2.07
FOXP3Q9BZS1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.09□□□□□ -2.07
FOXP3Q9BZS1 RNU6-170P-201ENST00000362832 104 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms