Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 RNU6-917P-201ENST00000516294 104 ntBASIC2.44□□□□□ -2.02
ZKSCAN3Q9BRR0 RNA5SP82-201ENST00000516707 92 ntBASIC2.44□□□□□ -2.02
ZKSCAN3Q9BRR0 MIR4764-201ENST00000580680 88 ntBASIC2.44□□□□□ -2.02
ZKSCAN3Q9BRR0 SNRPGP19-201ENST00000603826 189 ntBASIC2.44□□□□□ -2.02
ZKSCAN3Q9BRR0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
ZKSCAN3Q9BRR0 RNU6-1201P-201ENST00000384227 107 ntBASIC2.43□□□□□ -2.02
ZKSCAN3Q9BRR0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.43□□□□□ -2.02
ZKSCAN3Q9BRR0 AC012531.4-201ENST00000616509 177 ntBASIC2.43□□□□□ -2.02
ZKSCAN3Q9BRR0 MIR219B-201ENST00000637023 88 ntBASIC2.43□□□□□ -2.02
ZKSCAN3Q9BRR0 Z97988.1-201ENST00000637697 135 ntBASIC2.43□□□□□ -2.02
ZKSCAN3Q9BRR0 RNU6-1313P-201ENST00000362622 102 ntBASIC2.42□□□□□ -2.02
ZKSCAN3Q9BRR0 Y_RNA.388-201ENST00000383919 113 ntBASIC2.42□□□□□ -2.02
ZKSCAN3Q9BRR0 MIR520C-201ENST00000385005 87 ntBASIC2.42□□□□□ -2.02
ZKSCAN3Q9BRR0 RNU7-61P-201ENST00000515897 61 ntBASIC2.42□□□□□ -2.02
ZKSCAN3Q9BRR0 RNU6-322P-201ENST00000516010 103 ntBASIC2.42□□□□□ -2.02
ZKSCAN3Q9BRR0 RNU6-795P-201ENST00000516323 103 ntBASIC2.42□□□□□ -2.02
ZKSCAN3Q9BRR0 RNU2-19P-201ENST00000517288 84 ntBASIC2.42□□□□□ -2.02
ZKSCAN3Q9BRR0 AC026421.1-201ENST00000519101 163 ntBASIC2.42□□□□□ -2.02
ZKSCAN3Q9BRR0 AC245884.12-201ENST00000615364 59 ntBASIC2.42□□□□□ -2.02
ZKSCAN3Q9BRR0 AL512310.12-203ENST00000640543 90 ntBASIC2.42□□□□□ -2.02
ZKSCAN3Q9BRR0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
ZKSCAN3Q9BRR0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ZKSCAN3Q9BRR0 RNA5SP160-201ENST00000364866 120 ntBASIC2.41□□□□□ -2.02
ZKSCAN3Q9BRR0 RNU6-203P-201ENST00000384038 104 ntBASIC2.41□□□□□ -2.02
ZKSCAN3Q9BRR0 MIR450A2-201ENST00000385022 100 ntBASIC2.41□□□□□ -2.02
ZKSCAN3Q9BRR0 AC245047.7-201ENST00000440265 293 ntBASIC2.41□□□□□ -2.02
ZKSCAN3Q9BRR0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.41□□□□□ -2.02
ZKSCAN3Q9BRR0 DEFB122-202ENST00000569013 197 ntBASIC2.41□□□□□ -2.02
ZKSCAN3Q9BRR0 AC096720.1-201ENST00000604441 183 ntBASIC2.41□□□□□ -2.02
ZKSCAN3Q9BRR0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ZKSCAN3Q9BRR0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
ZKSCAN3Q9BRR0 Y_RNA.290-201ENST00000364879 114 ntBASIC2.4□□□□□ -2.03
ZKSCAN3Q9BRR0 SNORD115-35-201ENST00000365122 82 ntBASIC2.4□□□□□ -2.03
ZKSCAN3Q9BRR0 RNU6-1134P-201ENST00000365156 101 ntBASIC2.4□□□□□ -2.03
ZKSCAN3Q9BRR0 MIR194-1-201ENST00000384892 85 ntBASIC2.4□□□□□ -2.03
ZKSCAN3Q9BRR0 RNU6-644P-201ENST00000391155 98 ntBASIC2.4□□□□□ -2.03
ZKSCAN3Q9BRR0 AC004965.1-201ENST00000413033 213 ntBASIC2.4□□□□□ -2.03
ZKSCAN3Q9BRR0 MRPL35P3-201ENST00000421557 364 ntBASIC2.4□□□□□ -2.03
ZKSCAN3Q9BRR0 Y_RNA.659-201ENST00000515994 113 ntBASIC2.4□□□□□ -2.03
ZKSCAN3Q9BRR0 CYP3A52P-201ENST00000563326 91 ntBASIC2.4□□□□□ -2.03
ZKSCAN3Q9BRR0 AC062037.1-201ENST00000605302 128 ntBASIC2.4□□□□□ -2.03
ZKSCAN3Q9BRR0 MIR8065-201ENST00000620577 100 ntBASIC2.4□□□□□ -2.03
ZKSCAN3Q9BRR0 Y_RNA.95-201ENST00000363079 95 ntBASIC2.39□□□□□ -2.03
ZKSCAN3Q9BRR0 RNU6-60P-201ENST00000364792 103 ntBASIC2.39□□□□□ -2.03
ZKSCAN3Q9BRR0 RNU6-820P-201ENST00000384273 107 ntBASIC2.39□□□□□ -2.03
ZKSCAN3Q9BRR0 MIR653-201ENST00000385279 96 ntBASIC2.39□□□□□ -2.03
ZKSCAN3Q9BRR0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
ZKSCAN3Q9BRR0 RNU7-2P-201ENST00000516096 62 ntBASIC2.39□□□□□ -2.03
ZKSCAN3Q9BRR0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
ZKSCAN3Q9BRR0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
ZKSCAN3Q9BRR0 RNU6-342P-201ENST00000384521 104 ntBASIC2.38□□□□□ -2.03
ZKSCAN3Q9BRR0 AC108729.3-201ENST00000513484 108 ntBASIC2.38□□□□□ -2.03
ZKSCAN3Q9BRR0 RN7SKP12-201ENST00000516275 143 ntBASIC2.38□□□□□ -2.03
ZKSCAN3Q9BRR0 RNU7-35P-201ENST00000517174 62 ntBASIC2.38□□□□□ -2.03
ZKSCAN3Q9BRR0 AL451046.2-201ENST00000403074 277 ntBASIC2.37□□□□□ -2.03
ZKSCAN3Q9BRR0 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.37□□□□□ -2.03
ZKSCAN3Q9BRR0 RNU6-602P-201ENST00000411155 105 ntBASIC2.37□□□□□ -2.03
ZKSCAN3Q9BRR0 AC055731.1-201ENST00000474387 401 ntBASIC2.37□□□□□ -2.03
ZKSCAN3Q9BRR0 Y_RNA.705-201ENST00000516862 110 ntBASIC2.37□□□□□ -2.03
ZKSCAN3Q9BRR0 MIR5089-201ENST00000580047 84 ntBASIC2.37□□□□□ -2.03
ZKSCAN3Q9BRR0 MIR4777-201ENST00000583710 86 ntBASIC2.37□□□□□ -2.03
ZKSCAN3Q9BRR0 U7.3-201ENST00000616123 62 ntBASIC2.37□□□□□ -2.03
ZKSCAN3Q9BRR0 MIR4251-201ENST00000635819 61 ntBASIC2.37□□□□□ -2.03
ZKSCAN3Q9BRR0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.36□□□□□ -2.03
ZKSCAN3Q9BRR0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.36□□□□□ -2.03
ZKSCAN3Q9BRR0 MIR144-201ENST00000384886 86 ntBASIC2.36□□□□□ -2.03
ZKSCAN3Q9BRR0 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.36□□□□□ -2.03
ZKSCAN3Q9BRR0 MIR4439-201ENST00000583746 80 ntBASIC2.36□□□□□ -2.03
ZKSCAN3Q9BRR0 MIR548Z-201ENST00000584743 97 ntBASIC2.36□□□□□ -2.03
ZKSCAN3Q9BRR0 AC091304.10-201ENST00000641554 121 ntBASIC2.36□□□□□ -2.03
ZKSCAN3Q9BRR0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
ZKSCAN3Q9BRR0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
ZKSCAN3Q9BRR0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ZKSCAN3Q9BRR0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
ZKSCAN3Q9BRR0 SNORD114-1-201ENST00000362705 72 ntBASIC2.35□□□□□ -2.03
ZKSCAN3Q9BRR0 MIR206-201ENST00000384872 86 ntBASIC2.35□□□□□ -2.03
ZKSCAN3Q9BRR0 RNA5SP212-201ENST00000391223 107 ntBASIC2.35□□□□□ -2.03
ZKSCAN3Q9BRR0 AL161935.2-201ENST00000414627 60 ntBASIC2.35□□□□□ -2.03
ZKSCAN3Q9BRR0 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.35□□□□□ -2.03
ZKSCAN3Q9BRR0 AC121758.2-201ENST00000553271 193 ntBASIC2.35□□□□□ -2.03
ZKSCAN3Q9BRR0 MIR548AO-201ENST00000579992 96 ntBASIC2.35□□□□□ -2.03
ZKSCAN3Q9BRR0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
ZKSCAN3Q9BRR0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.35□□□□□ -2.03
ZKSCAN3Q9BRR0 MIR513A1-201ENST00000385138 129 ntBASIC2.34□□□□□ -2.03
ZKSCAN3Q9BRR0 RNU6-972P-201ENST00000391208 107 ntBASIC2.34□□□□□ -2.03
ZKSCAN3Q9BRR0 SNORD23.1-201ENST00000408212 104 ntBASIC2.34□□□□□ -2.03
ZKSCAN3Q9BRR0 JTBP1-201ENST00000441314 247 ntBASIC2.34□□□□□ -2.03
ZKSCAN3Q9BRR0 snoU13.15-201ENST00000459407 104 ntBASIC2.34□□□□□ -2.03
ZKSCAN3Q9BRR0 MIR3935-201ENST00000583472 104 ntBASIC2.34□□□□□ -2.03
ZKSCAN3Q9BRR0 MIR6895-201ENST00000613497 78 ntBASIC2.34□□□□□ -2.03
ZKSCAN3Q9BRR0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
ZKSCAN3Q9BRR0 RNA5SP259-201ENST00000365541 109 ntBASIC2.33□□□□□ -2.04
ZKSCAN3Q9BRR0 SNORD38B-201ENST00000384690 67 ntBASIC2.33□□□□□ -2.04
ZKSCAN3Q9BRR0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.33□□□□□ -2.04
ZKSCAN3Q9BRR0 MIR1289-2-201ENST00000408360 111 ntBASIC2.33□□□□□ -2.04
ZKSCAN3Q9BRR0 RNU6-887P-201ENST00000410660 100 ntBASIC2.33□□□□□ -2.04
ZKSCAN3Q9BRR0 RNU6-1086P-201ENST00000410930 100 ntBASIC2.33□□□□□ -2.04
ZKSCAN3Q9BRR0 RNU6-162P-201ENST00000516228 103 ntBASIC2.33□□□□□ -2.04
ZKSCAN3Q9BRR0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.33□□□□□ -2.04
ZKSCAN3Q9BRR0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 189.1 ms