Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU6-514P-201ENST00000384208 107 ntBASIC-0.1□□□□□ -2.43
RPRD1AQ96P16 RNU6-823P-201ENST00000391042 103 ntBASIC-0.1□□□□□ -2.43
RPRD1AQ96P16 RNA5SP227-201ENST00000516184 113 ntBASIC-0.1□□□□□ -2.43
RPRD1AQ96P16 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.1□□□□□ -2.43
RPRD1AQ96P16 MIR376A2-201ENST00000636782 80 ntBASIC-0.1□□□□□ -2.43
RPRD1AQ96P16 MIR371B-201ENST00000638082 66 ntBASIC-0.1□□□□□ -2.43
RPRD1AQ96P16 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.11□□□□□ -2.43
RPRD1AQ96P16 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.11□□□□□ -2.43
RPRD1AQ96P16 AC096949.1-201ENST00000412047 152 ntBASIC-0.11□□□□□ -2.43
RPRD1AQ96P16 AL731563.1-201ENST00000442202 214 ntBASIC-0.11□□□□□ -2.43
RPRD1AQ96P16 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.11□□□□□ -2.43
RPRD1AQ96P16 SNORA27.4-201ENST00000516650 95 ntBASIC-0.11□□□□□ -2.43
RPRD1AQ96P16 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.12□□□□□ -2.43
RPRD1AQ96P16 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.12□□□□□ -2.43
RPRD1AQ96P16 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.12□□□□□ -2.43
RPRD1AQ96P16 SNORA1-201ENST00000384107 130 ntBASIC-0.12□□□□□ -2.43
RPRD1AQ96P16 SNORA8.3-201ENST00000384679 139 ntBASIC-0.12□□□□□ -2.43
RPRD1AQ96P16 RNU6-127P-201ENST00000390897 107 ntBASIC-0.12□□□□□ -2.43
RPRD1AQ96P16 SNORA53-201ENST00000391141 249 ntBASIC-0.12□□□□□ -2.43
RPRD1AQ96P16 SNORA26-201ENST00000391286 122 ntBASIC-0.12□□□□□ -2.43
RPRD1AQ96P16 MIR1252-201ENST00000408861 65 ntBASIC-0.12□□□□□ -2.43
RPRD1AQ96P16 RNA5SP261-201ENST00000410536 106 ntBASIC-0.12□□□□□ -2.43
RPRD1AQ96P16 RNU6-765P-201ENST00000516916 99 ntBASIC-0.12□□□□□ -2.43
RPRD1AQ96P16 RNA5SP47-201ENST00000517230 109 ntBASIC-0.12□□□□□ -2.43
RPRD1AQ96P16 MIR4290-201ENST00000583807 95 ntBASIC-0.12□□□□□ -2.43
RPRD1AQ96P16 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.13□□□□□ -2.43
RPRD1AQ96P16 MIR215-201ENST00000384858 110 ntBASIC-0.13□□□□□ -2.43
RPRD1AQ96P16 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
RPRD1AQ96P16 RNU2-55P-201ENST00000411146 174 ntBASIC-0.13□□□□□ -2.43
RPRD1AQ96P16 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.13□□□□□ -2.43
RPRD1AQ96P16 AC141846.1-201ENST00000568348 142 ntBASIC-0.13□□□□□ -2.43
RPRD1AQ96P16 MIR4491-201ENST00000581087 68 ntBASIC-0.13□□□□□ -2.43
RPRD1AQ96P16 AC097639.2-201ENST00000603159 172 ntBASIC-0.13□□□□□ -2.43
RPRD1AQ96P16 AC037487.3-201ENST00000606668 112 ntBASIC-0.13□□□□□ -2.43
RPRD1AQ96P16 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.14□□□□□ -2.43
RPRD1AQ96P16 RNU4-73P-201ENST00000363164 141 ntBASIC-0.14□□□□□ -2.43
RPRD1AQ96P16 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.14□□□□□ -2.43
RPRD1AQ96P16 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.14□□□□□ -2.43
RPRD1AQ96P16 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.14□□□□□ -2.43
RPRD1AQ96P16 RNU6-291P-201ENST00000384720 107 ntBASIC-0.14□□□□□ -2.43
RPRD1AQ96P16 MIR626-201ENST00000385032 94 ntBASIC-0.14□□□□□ -2.43
RPRD1AQ96P16 RNU7-129P-201ENST00000516128 62 ntBASIC-0.14□□□□□ -2.43
RPRD1AQ96P16 RNA5SP153-201ENST00000516498 76 ntBASIC-0.14□□□□□ -2.43
RPRD1AQ96P16 RNU6-135P-201ENST00000516769 101 ntBASIC-0.14□□□□□ -2.43
RPRD1AQ96P16 MIR4305-201ENST00000583252 102 ntBASIC-0.14□□□□□ -2.43
RPRD1AQ96P16 AL133255.1-201ENST00000606374 441 ntBASIC-0.14□□□□□ -2.43
RPRD1AQ96P16 AC091304.10-201ENST00000641554 121 ntBASIC-0.14□□□□□ -2.43
RPRD1AQ96P16 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.15□□□□□ -2.43
RPRD1AQ96P16 RNU6-211P-201ENST00000384047 107 ntBASIC-0.15□□□□□ -2.43
RPRD1AQ96P16 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.15□□□□□ -2.43
RPRD1AQ96P16 SNORA72.6-201ENST00000384520 129 ntBASIC-0.15□□□□□ -2.43
RPRD1AQ96P16 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.15□□□□□ -2.43
RPRD1AQ96P16 SNORD28-201ENST00000384706 75 ntBASIC-0.15□□□□□ -2.43
RPRD1AQ96P16 MIR760-201ENST00000390220 80 ntBASIC-0.15□□□□□ -2.43
RPRD1AQ96P16 RPL21P38-201ENST00000418090 167 ntBASIC-0.15□□□□□ -2.43
RPRD1AQ96P16 MTND5P34-201ENST00000568888 325 ntBASIC-0.15□□□□□ -2.43
RPRD1AQ96P16 MIR4795-201ENST00000584182 89 ntBASIC-0.15□□□□□ -2.43
RPRD1AQ96P16 AC090971.5-201ENST00000621102 293 ntBASIC-0.15□□□□□ -2.43
RPRD1AQ96P16 AC091932.4-201ENST00000623386 200 ntBASIC-0.15□□□□□ -2.43
RPRD1AQ96P16 UBE2WP1-201ENST00000362030 340 ntBASIC-0.16□□□□□ -2.44
RPRD1AQ96P16 MIR369-201ENST00000362155 70 ntBASIC-0.16□□□□□ -2.44
RPRD1AQ96P16 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.16□□□□□ -2.44
RPRD1AQ96P16 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.16□□□□□ -2.44
RPRD1AQ96P16 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.16□□□□□ -2.44
RPRD1AQ96P16 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.16□□□□□ -2.44
RPRD1AQ96P16 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.16□□□□□ -2.44
RPRD1AQ96P16 MIR643-201ENST00000385267 97 ntBASIC-0.16□□□□□ -2.44
RPRD1AQ96P16 MT-TT-201ENST00000387460 66 ntBASIC-0.16□□□□□ -2.44
RPRD1AQ96P16 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.16□□□□□ -2.44
RPRD1AQ96P16 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.16□□□□□ -2.44
RPRD1AQ96P16 SNRPGP8-201ENST00000454064 226 ntBASIC-0.16□□□□□ -2.44
RPRD1AQ96P16 MTND3P22-201ENST00000510932 243 ntBASIC-0.16□□□□□ -2.44
RPRD1AQ96P16 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.16□□□□□ -2.44
RPRD1AQ96P16 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.17□□□□□ -2.44
RPRD1AQ96P16 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.17□□□□□ -2.44
RPRD1AQ96P16 MIR610-201ENST00000385139 96 ntBASIC-0.17□□□□□ -2.44
RPRD1AQ96P16 RNU6-101P-201ENST00000410323 104 ntBASIC-0.17□□□□□ -2.44
RPRD1AQ96P16 ELOCP20-201ENST00000422460 345 ntBASIC-0.17□□□□□ -2.44
RPRD1AQ96P16 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.17□□□□□ -2.44
RPRD1AQ96P16 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.17□□□□□ -2.44
RPRD1AQ96P16 RNU6-848P-201ENST00000515948 107 ntBASIC-0.17□□□□□ -2.44
RPRD1AQ96P16 RNU6-617P-201ENST00000516147 107 ntBASIC-0.17□□□□□ -2.44
RPRD1AQ96P16 RNU6-473P-201ENST00000516164 107 ntBASIC-0.17□□□□□ -2.44
RPRD1AQ96P16 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.17□□□□□ -2.44
RPRD1AQ96P16 SNORA40.15-201ENST00000516884 107 ntBASIC-0.17□□□□□ -2.44
RPRD1AQ96P16 MIR5197-201ENST00000583721 112 ntBASIC-0.17□□□□□ -2.44
RPRD1AQ96P16 MIR4639-201ENST00000584938 69 ntBASIC-0.17□□□□□ -2.44
RPRD1AQ96P16 MIR6841-201ENST00000637129 72 ntBASIC-0.17□□□□□ -2.44
RPRD1AQ96P16 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.18□□□□□ -2.44
RPRD1AQ96P16 SNORD42.2-201ENST00000365570 69 ntBASIC-0.18□□□□□ -2.44
RPRD1AQ96P16 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.18□□□□□ -2.44
RPRD1AQ96P16 RNU6-949P-201ENST00000384040 107 ntBASIC-0.18□□□□□ -2.44
RPRD1AQ96P16 RNU6-535P-201ENST00000384722 107 ntBASIC-0.18□□□□□ -2.44
RPRD1AQ96P16 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.18□□□□□ -2.44
RPRD1AQ96P16 RNU7-80P-201ENST00000459562 61 ntBASIC-0.18□□□□□ -2.44
RPRD1AQ96P16 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.18□□□□□ -2.44
RPRD1AQ96P16 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.18□□□□□ -2.44
RPRD1AQ96P16 AL596211.1-201ENST00000569873 2277 ntBASIC-0.18□□□□□ -2.44
RPRD1AQ96P16 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.19□□□□□ -2.44
RPRD1AQ96P16 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 268.5 ms