Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.57□□□□□ -2
IFT43Q96FT9 AC005336.3-201ENST00000623833 2679 ntBASIC2.57□□□□□ -2
IFT43Q96FT9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
IFT43Q96FT9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
IFT43Q96FT9 RNA5SP393-201ENST00000363423 117 ntBASIC2.57□□□□□ -2
IFT43Q96FT9 SNORD116-10-201ENST00000363791 102 ntBASIC2.57□□□□□ -2
IFT43Q96FT9 RNU6-203P-201ENST00000384038 104 ntBASIC2.57□□□□□ -2
IFT43Q96FT9 RNU6-1124P-201ENST00000384169 107 ntBASIC2.57□□□□□ -2
IFT43Q96FT9 MIR27B-201ENST00000385129 97 ntBASIC2.57□□□□□ -2
IFT43Q96FT9 RNU7-35P-201ENST00000517174 62 ntBASIC2.57□□□□□ -2
IFT43Q96FT9 U4.3-201ENST00000621047 82 ntBASIC2.57□□□□□ -2
IFT43Q96FT9 AC008133.2-201ENST00000624540 351 ntBASIC2.57□□□□□ -2
IFT43Q96FT9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
IFT43Q96FT9 RNU6-1276P-201ENST00000365372 104 ntBASIC2.56□□□□□ -2
IFT43Q96FT9 MIR520C-201ENST00000385005 87 ntBASIC2.56□□□□□ -2
IFT43Q96FT9 Z97988.1-201ENST00000637697 135 ntBASIC2.56□□□□□ -2
IFT43Q96FT9 RNU6-228P-201ENST00000362700 106 ntBASIC2.55□□□□□ -2
IFT43Q96FT9 SNORD38.1-201ENST00000363863 68 ntBASIC2.55□□□□□ -2
IFT43Q96FT9 SNORD58A-201ENST00000383875 65 ntBASIC2.55□□□□□ -2
IFT43Q96FT9 RNU6-342P-201ENST00000384521 104 ntBASIC2.55□□□□□ -2
IFT43Q96FT9 MIR206-201ENST00000384872 86 ntBASIC2.55□□□□□ -2
IFT43Q96FT9 RNU6-402P-201ENST00000410678 103 ntBASIC2.55□□□□□ -2
IFT43Q96FT9 AC004965.1-201ENST00000413033 213 ntBASIC2.55□□□□□ -2
IFT43Q96FT9 AC090844.1-201ENST00000422019 156 ntBASIC2.55□□□□□ -2
IFT43Q96FT9 MIR376B-201ENST00000614515 100 ntBASIC2.55□□□□□ -2
IFT43Q96FT9 RNU6-497P-201ENST00000365316 104 ntBASIC2.54□□□□□ -2
IFT43Q96FT9 MIR194-1-201ENST00000384892 85 ntBASIC2.54□□□□□ -2
IFT43Q96FT9 U8.15-201ENST00000390947 134 ntBASIC2.54□□□□□ -2
IFT43Q96FT9 AL445685.2-201ENST00000422551 342 ntBASIC2.54□□□□□ -2
IFT43Q96FT9 UBL5P1-201ENST00000507979 193 ntBASIC2.54□□□□□ -2
IFT43Q96FT9 RNU2-19P-201ENST00000517288 84 ntBASIC2.54□□□□□ -2
IFT43Q96FT9 DEFB122-202ENST00000569013 197 ntBASIC2.54□□□□□ -2
IFT43Q96FT9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.54□□□□□ -2
IFT43Q96FT9 MIR8065-201ENST00000620577 100 ntBASIC2.54□□□□□ -2
IFT43Q96FT9 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
IFT43Q96FT9 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
IFT43Q96FT9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
IFT43Q96FT9 Y_RNA.73-201ENST00000362910 113 ntBASIC2.53□□□□□ -2
IFT43Q96FT9 Y_RNA.140-201ENST00000363474 103 ntBASIC2.53□□□□□ -2
IFT43Q96FT9 RPS12P2-201ENST00000439728 269 ntBASIC2.53□□□□□ -2
IFT43Q96FT9 AC079804.2-201ENST00000490376 200 ntBASIC2.53□□□□□ -2
IFT43Q96FT9 RNU6-322P-201ENST00000516010 103 ntBASIC2.53□□□□□ -2
IFT43Q96FT9 RNU6-1006P-201ENST00000516998 103 ntBASIC2.53□□□□□ -2
IFT43Q96FT9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
IFT43Q96FT9 SNORA70B-201ENST00000384210 135 ntBASIC2.52□□□□□ -2.01
IFT43Q96FT9 MIR653-201ENST00000385279 96 ntBASIC2.52□□□□□ -2.01
IFT43Q96FT9 RNU7-79P-201ENST00000516082 62 ntBASIC2.52□□□□□ -2.01
IFT43Q96FT9 RNA5SP320-201ENST00000516263 124 ntBASIC2.52□□□□□ -2.01
IFT43Q96FT9 RNA5SP24-201ENST00000516478 95 ntBASIC2.52□□□□□ -2.01
IFT43Q96FT9 CYP3A52P-201ENST00000563326 91 ntBASIC2.52□□□□□ -2.01
IFT43Q96FT9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.52□□□□□ -2.01
IFT43Q96FT9 SNORD53-201ENST00000579969 78 ntBASIC2.52□□□□□ -2.01
IFT43Q96FT9 MIR4668-201ENST00000582284 70 ntBASIC2.52□□□□□ -2.01
IFT43Q96FT9 AC025521.1-201ENST00000621624 286 ntBASIC2.52□□□□□ -2.01
IFT43Q96FT9 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.52□□□□□ -2.01
IFT43Q96FT9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
IFT43Q96FT9 RNA5SP456-201ENST00000364002 114 ntBASIC2.51□□□□□ -2.01
IFT43Q96FT9 Y_RNA.247-201ENST00000364500 92 ntBASIC2.51□□□□□ -2.01
IFT43Q96FT9 RNU6-219P-201ENST00000364728 107 ntBASIC2.51□□□□□ -2.01
IFT43Q96FT9 RNU6-979P-201ENST00000383896 107 ntBASIC2.51□□□□□ -2.01
IFT43Q96FT9 MIR1255A-201ENST00000408338 113 ntBASIC2.51□□□□□ -2.01
IFT43Q96FT9 RNU6-447P-201ENST00000410293 104 ntBASIC2.51□□□□□ -2.01
IFT43Q96FT9 RNU6-1118P-201ENST00000410382 104 ntBASIC2.51□□□□□ -2.01
IFT43Q96FT9 RNU6-1076P-201ENST00000410397 104 ntBASIC2.51□□□□□ -2.01
IFT43Q96FT9 RNU6-355P-201ENST00000410427 104 ntBASIC2.51□□□□□ -2.01
IFT43Q96FT9 RNU6-791P-201ENST00000410467 104 ntBASIC2.51□□□□□ -2.01
IFT43Q96FT9 RNU6-705P-201ENST00000410601 104 ntBASIC2.51□□□□□ -2.01
IFT43Q96FT9 RNU6-1100P-201ENST00000410691 104 ntBASIC2.51□□□□□ -2.01
IFT43Q96FT9 RNU6-860P-201ENST00000410860 104 ntBASIC2.51□□□□□ -2.01
IFT43Q96FT9 RNU6-1086P-201ENST00000410930 100 ntBASIC2.51□□□□□ -2.01
IFT43Q96FT9 RNU6-602P-201ENST00000411155 105 ntBASIC2.51□□□□□ -2.01
IFT43Q96FT9 RNU6-1217P-201ENST00000411276 104 ntBASIC2.51□□□□□ -2.01
IFT43Q96FT9 RNU6-785P-201ENST00000411324 104 ntBASIC2.51□□□□□ -2.01
IFT43Q96FT9 RPS29P28-201ENST00000446439 141 ntBASIC2.51□□□□□ -2.01
IFT43Q96FT9 AC055731.1-201ENST00000474387 401 ntBASIC2.51□□□□□ -2.01
IFT43Q96FT9 MIR5588-201ENST00000581890 63 ntBASIC2.51□□□□□ -2.01
IFT43Q96FT9 RNU6-86P-201ENST00000606534 107 ntBASIC2.51□□□□□ -2.01
IFT43Q96FT9 U6.90-201ENST00000614007 104 ntBASIC2.51□□□□□ -2.01
IFT43Q96FT9 AC245884.12-201ENST00000615364 59 ntBASIC2.51□□□□□ -2.01
IFT43Q96FT9 U6.70-201ENST00000620287 104 ntBASIC2.51□□□□□ -2.01
IFT43Q96FT9 RNU6-1163P-201ENST00000364516 107 ntBASIC2.5□□□□□ -2.01
IFT43Q96FT9 RNU6-865P-201ENST00000364772 107 ntBASIC2.5□□□□□ -2.01
IFT43Q96FT9 Y_RNA.620-201ENST00000411009 88 ntBASIC2.5□□□□□ -2.01
IFT43Q96FT9 RNA5SP395-201ENST00000516567 118 ntBASIC2.5□□□□□ -2.01
IFT43Q96FT9 AC121758.2-201ENST00000553271 193 ntBASIC2.5□□□□□ -2.01
IFT43Q96FT9 MIR5194-201ENST00000582634 120 ntBASIC2.5□□□□□ -2.01
IFT43Q96FT9 AC103810.7-201ENST00000607821 91 ntBASIC2.5□□□□□ -2.01
IFT43Q96FT9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
IFT43Q96FT9 SNORD114-10-201ENST00000363409 72 ntBASIC2.49□□□□□ -2.01
IFT43Q96FT9 RNA5SP212-201ENST00000391223 107 ntBASIC2.49□□□□□ -2.01
IFT43Q96FT9 AC008413.1-201ENST00000511864 177 ntBASIC2.49□□□□□ -2.01
IFT43Q96FT9 RNU1-41P-201ENST00000516161 162 ntBASIC2.49□□□□□ -2.01
IFT43Q96FT9 RNU1-48P-201ENST00000516400 162 ntBASIC2.49□□□□□ -2.01
IFT43Q96FT9 SNORD67.1-201ENST00000516618 108 ntBASIC2.49□□□□□ -2.01
IFT43Q96FT9 RNU6-267P-201ENST00000516714 103 ntBASIC2.49□□□□□ -2.01
IFT43Q96FT9 MIR548AO-201ENST00000579992 96 ntBASIC2.49□□□□□ -2.01
IFT43Q96FT9 MIR4251-201ENST00000635819 61 ntBASIC2.49□□□□□ -2.01
IFT43Q96FT9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
IFT43Q96FT9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
IFT43Q96FT9 MIR34C-201ENST00000384831 77 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 192.8 ms