Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 AP000648.3-201ENST00000623539 4507 ntBASIC2.6□□□□□ -1.99
VTI1AQ96AJ9 Y_RNA.107-201ENST00000363190 121 ntBASIC2.6□□□□□ -1.99
VTI1AQ96AJ9 RNU6-1067P-201ENST00000384752 107 ntBASIC2.6□□□□□ -1.99
VTI1AQ96AJ9 SNORA7.5-201ENST00000410672 110 ntBASIC2.6□□□□□ -1.99
VTI1AQ96AJ9 RNU6-548P-201ENST00000517083 115 ntBASIC2.6□□□□□ -1.99
VTI1AQ96AJ9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.6□□□□□ -1.99
VTI1AQ96AJ9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.6□□□□□ -1.99
VTI1AQ96AJ9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.6□□□□□ -1.99
VTI1AQ96AJ9 AL353997.5-201ENST00000618886 171 ntBASIC2.6□□□□□ -1.99
VTI1AQ96AJ9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
VTI1AQ96AJ9 RNU6-832P-201ENST00000363319 107 ntBASIC2.59□□□□□ -1.99
VTI1AQ96AJ9 SNORA1.1-201ENST00000364671 133 ntBASIC2.59□□□□□ -1.99
VTI1AQ96AJ9 SNORD77B-201ENST00000391112 67 ntBASIC2.59□□□□□ -1.99
VTI1AQ96AJ9 AL161935.2-201ENST00000414627 60 ntBASIC2.59□□□□□ -1.99
VTI1AQ96AJ9 AL096840.1-201ENST00000603287 93 ntBASIC2.59□□□□□ -1.99
VTI1AQ96AJ9 MALAT1.1-201ENST00000618249 95 ntBASIC2.59□□□□□ -1.99
VTI1AQ96AJ9 AC005336.3-201ENST00000623833 2679 ntBASIC2.59□□□□□ -2
VTI1AQ96AJ9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
VTI1AQ96AJ9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
VTI1AQ96AJ9 AL596028.1-201ENST00000326971 197 ntBASIC2.58□□□□□ -2
VTI1AQ96AJ9 Y_RNA.342-201ENST00000365352 113 ntBASIC2.58□□□□□ -2
VTI1AQ96AJ9 RNU6-439P-201ENST00000384188 106 ntBASIC2.58□□□□□ -2
VTI1AQ96AJ9 RNU6-342P-201ENST00000384521 104 ntBASIC2.58□□□□□ -2
VTI1AQ96AJ9 MIR520C-201ENST00000385005 87 ntBASIC2.58□□□□□ -2
VTI1AQ96AJ9 Y_RNA.601-201ENST00000410500 113 ntBASIC2.58□□□□□ -2
VTI1AQ96AJ9 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.58□□□□□ -2
VTI1AQ96AJ9 RNA5SP402-201ENST00000517148 110 ntBASIC2.58□□□□□ -2
VTI1AQ96AJ9 MIR8065-201ENST00000620577 100 ntBASIC2.58□□□□□ -2
VTI1AQ96AJ9 MIR2052-201ENST00000636055 55 ntBASIC2.58□□□□□ -2
VTI1AQ96AJ9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
VTI1AQ96AJ9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
VTI1AQ96AJ9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
VTI1AQ96AJ9 MIR21-201ENST00000362134 72 ntBASIC2.57□□□□□ -2
VTI1AQ96AJ9 MIR653-201ENST00000385279 96 ntBASIC2.57□□□□□ -2
VTI1AQ96AJ9 AL023284.1-201ENST00000403956 276 ntBASIC2.57□□□□□ -2
VTI1AQ96AJ9 MIR1302-4-201ENST00000408701 150 ntBASIC2.57□□□□□ -2
VTI1AQ96AJ9 MIR514B-201ENST00000516774 80 ntBASIC2.57□□□□□ -2
VTI1AQ96AJ9 RNU6-762P-201ENST00000517107 102 ntBASIC2.57□□□□□ -2
VTI1AQ96AJ9 MIR4713-201ENST00000582691 75 ntBASIC2.57□□□□□ -2
VTI1AQ96AJ9 FAM71BP1-201ENST00000604431 523 ntBASIC2.57□□□□□ -2
VTI1AQ96AJ9 AC012531.4-201ENST00000616509 177 ntBASIC2.57□□□□□ -2
VTI1AQ96AJ9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.57□□□□□ -2
VTI1AQ96AJ9 Z97988.1-201ENST00000637697 135 ntBASIC2.57□□□□□ -2
VTI1AQ96AJ9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VTI1AQ96AJ9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.56□□□□□ -2
VTI1AQ96AJ9 SNORA67.3-201ENST00000384366 140 ntBASIC2.56□□□□□ -2
VTI1AQ96AJ9 RPL23AP42-201ENST00000471152 471 ntBASIC2.56□□□□□ -2
VTI1AQ96AJ9 RNU7-41P-201ENST00000515917 61 ntBASIC2.56□□□□□ -2
VTI1AQ96AJ9 RNU6-795P-201ENST00000516323 103 ntBASIC2.56□□□□□ -2
VTI1AQ96AJ9 RNU6-521P-201ENST00000516663 105 ntBASIC2.56□□□□□ -2
VTI1AQ96AJ9 AC022254.1-201ENST00000567857 235 ntBASIC2.56□□□□□ -2
VTI1AQ96AJ9 MIR548AO-201ENST00000579992 96 ntBASIC2.56□□□□□ -2
VTI1AQ96AJ9 MIR5694-201ENST00000581190 76 ntBASIC2.56□□□□□ -2
VTI1AQ96AJ9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.56□□□□□ -2
VTI1AQ96AJ9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.56□□□□□ -2
VTI1AQ96AJ9 SNORA64-201ENST00000384674 134 ntBASIC2.55□□□□□ -2
VTI1AQ96AJ9 RNU6-602P-201ENST00000411155 105 ntBASIC2.55□□□□□ -2
VTI1AQ96AJ9 AC090844.1-201ENST00000422019 156 ntBASIC2.55□□□□□ -2
VTI1AQ96AJ9 RNU6-844P-201ENST00000517175 102 ntBASIC2.55□□□□□ -2
VTI1AQ96AJ9 MIR4299-201ENST00000577899 72 ntBASIC2.55□□□□□ -2
VTI1AQ96AJ9 MIR5007-201ENST00000583098 95 ntBASIC2.55□□□□□ -2
VTI1AQ96AJ9 MIR548Z-201ENST00000584743 97 ntBASIC2.55□□□□□ -2
VTI1AQ96AJ9 AL442128.1-201ENST00000615151 90 ntBASIC2.55□□□□□ -2
VTI1AQ96AJ9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
VTI1AQ96AJ9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VTI1AQ96AJ9 Y_RNA.220-201ENST00000364244 109 ntBASIC2.54□□□□□ -2
VTI1AQ96AJ9 Y_RNA.558-201ENST00000384685 113 ntBASIC2.54□□□□□ -2
VTI1AQ96AJ9 MIR221-201ENST00000385135 110 ntBASIC2.54□□□□□ -2
VTI1AQ96AJ9 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.54□□□□□ -2
VTI1AQ96AJ9 AC245047.7-201ENST00000440265 293 ntBASIC2.54□□□□□ -2
VTI1AQ96AJ9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.54□□□□□ -2
VTI1AQ96AJ9 Y_RNA.10-201ENST00000362371 110 ntBASIC2.53□□□□□ -2
VTI1AQ96AJ9 RNU6-1201P-201ENST00000384227 107 ntBASIC2.53□□□□□ -2
VTI1AQ96AJ9 AC091304.10-201ENST00000641554 121 ntBASIC2.53□□□□□ -2
VTI1AQ96AJ9 RNU6-170P-201ENST00000362832 104 ntBASIC2.52□□□□□ -2.01
VTI1AQ96AJ9 RNA5SP259-201ENST00000365541 109 ntBASIC2.52□□□□□ -2.01
VTI1AQ96AJ9 SNORA18-201ENST00000384416 132 ntBASIC2.52□□□□□ -2.01
VTI1AQ96AJ9 MIR513A1-201ENST00000385138 129 ntBASIC2.52□□□□□ -2.01
VTI1AQ96AJ9 JTBP1-201ENST00000441314 247 ntBASIC2.52□□□□□ -2.01
VTI1AQ96AJ9 RNU7-61P-201ENST00000515897 61 ntBASIC2.52□□□□□ -2.01
VTI1AQ96AJ9 SNORA44.1-201ENST00000517031 108 ntBASIC2.52□□□□□ -2.01
VTI1AQ96AJ9 RNU7-35P-201ENST00000517174 62 ntBASIC2.52□□□□□ -2.01
VTI1AQ96AJ9 MIR4251-201ENST00000635819 61 ntBASIC2.52□□□□□ -2.01
VTI1AQ96AJ9 MIR219B-201ENST00000637023 88 ntBASIC2.52□□□□□ -2.01
VTI1AQ96AJ9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
VTI1AQ96AJ9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
VTI1AQ96AJ9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
VTI1AQ96AJ9 Y_RNA.377-201ENST00000365644 108 ntBASIC2.51□□□□□ -2.01
VTI1AQ96AJ9 SNORD41-201ENST00000386967 70 ntBASIC2.51□□□□□ -2.01
VTI1AQ96AJ9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
VTI1AQ96AJ9 RNU6-1307P-201ENST00000391012 103 ntBASIC2.51□□□□□ -2.01
VTI1AQ96AJ9 AC019129.1-201ENST00000403786 261 ntBASIC2.51□□□□□ -2.01
VTI1AQ96AJ9 RNY4P29-201ENST00000410801 97 ntBASIC2.51□□□□□ -2.01
VTI1AQ96AJ9 AC004941.2-201ENST00000427009 228 ntBASIC2.51□□□□□ -2.01
VTI1AQ96AJ9 RNU6-1018P-201ENST00000516577 106 ntBASIC2.51□□□□□ -2.01
VTI1AQ96AJ9 AL137847.3-201ENST00000611521 109 ntBASIC2.51□□□□□ -2.01
VTI1AQ96AJ9 MIRLET7G-201ENST00000362280 84 ntBASIC2.5□□□□□ -2.01
VTI1AQ96AJ9 Y_RNA.290-201ENST00000364879 114 ntBASIC2.5□□□□□ -2.01
VTI1AQ96AJ9 Y_RNA.388-201ENST00000383919 113 ntBASIC2.5□□□□□ -2.01
VTI1AQ96AJ9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms