Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 Y_RNA.81-201ENST00000362997 102 ntBASIC1.85□□□□□ -2.11
ERCC4Q92889 MIR548A3-201ENST00000385297 97 ntBASIC1.85□□□□□ -2.11
ERCC4Q92889 MT-TI-201ENST00000387365 69 ntBASIC1.85□□□□□ -2.11
ERCC4Q92889 snoU13.9-201ENST00000458927 103 ntBASIC1.85□□□□□ -2.11
ERCC4Q92889 Y_RNA.649-201ENST00000459077 103 ntBASIC1.85□□□□□ -2.11
ERCC4Q92889 RNU7-41P-201ENST00000515917 61 ntBASIC1.85□□□□□ -2.11
ERCC4Q92889 MIR6717-201ENST00000622747 73 ntBASIC1.85□□□□□ -2.11
ERCC4Q92889 RNU6-1190P-201ENST00000410811 104 ntBASIC1.84□□□□□ -2.11
ERCC4Q92889 RNU1-98P-201ENST00000458992 160 ntBASIC1.84□□□□□ -2.11
ERCC4Q92889 RNU6-922P-201ENST00000516753 99 ntBASIC1.84□□□□□ -2.11
ERCC4Q92889 MTND5P34-201ENST00000568888 325 ntBASIC1.84□□□□□ -2.11
ERCC4Q92889 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.84□□□□□ -2.11
ERCC4Q92889 SNORD1A-201ENST00000364968 72 ntBASIC1.83□□□□□ -2.12
ERCC4Q92889 RNU6-1104P-201ENST00000384723 104 ntBASIC1.83□□□□□ -2.12
ERCC4Q92889 RNY4P18-201ENST00000391107 89 ntBASIC1.83□□□□□ -2.12
ERCC4Q92889 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.83□□□□□ -2.12
ERCC4Q92889 RNA5SP261-201ENST00000410536 106 ntBASIC1.83□□□□□ -2.12
ERCC4Q92889 AL035461.1-201ENST00000421490 332 ntBASIC1.83□□□□□ -2.12
ERCC4Q92889 SNORD111.1-201ENST00000516421 86 ntBASIC1.83□□□□□ -2.12
ERCC4Q92889 RNU6-1258P-201ENST00000516911 111 ntBASIC1.83□□□□□ -2.12
ERCC4Q92889 Y_RNA.709-201ENST00000516952 92 ntBASIC1.83□□□□□ -2.12
ERCC4Q92889 AL357312.1-201ENST00000603879 298 ntBASIC1.83□□□□□ -2.12
ERCC4Q92889 GHRLOS.1-201ENST00000610995 70 ntBASIC1.83□□□□□ -2.12
ERCC4Q92889 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.83□□□□□ -2.12
ERCC4Q92889 Z97988.1-201ENST00000637697 135 ntBASIC1.83□□□□□ -2.12
ERCC4Q92889 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
ERCC4Q92889 SNORD115-2-201ENST00000362842 82 ntBASIC1.82□□□□□ -2.12
ERCC4Q92889 SNORD115-20-201ENST00000365099 82 ntBASIC1.82□□□□□ -2.12
ERCC4Q92889 SNORD116-21-201ENST00000384507 92 ntBASIC1.82□□□□□ -2.12
ERCC4Q92889 AC063976.4-201ENST00000421971 163 ntBASIC1.82□□□□□ -2.12
ERCC4Q92889 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.82□□□□□ -2.12
ERCC4Q92889 RNU6-893P-201ENST00000458841 100 ntBASIC1.82□□□□□ -2.12
ERCC4Q92889 MIR3152-201ENST00000579801 74 ntBASIC1.82□□□□□ -2.12
ERCC4Q92889 AL121890.5-201ENST00000620848 304 ntBASIC1.82□□□□□ -2.12
ERCC4Q92889 Y_RNA.35-201ENST00000362601 101 ntBASIC1.81□□□□□ -2.12
ERCC4Q92889 AL022718.1-201ENST00000412004 84 ntBASIC1.81□□□□□ -2.12
ERCC4Q92889 AL512326.2-201ENST00000426359 151 ntBASIC1.81□□□□□ -2.12
ERCC4Q92889 AC004812.1-201ENST00000540773 146 ntBASIC1.81□□□□□ -2.12
ERCC4Q92889 AC022523.2-201ENST00000561045 150 ntBASIC1.81□□□□□ -2.12
ERCC4Q92889 MIR4679-2-201ENST00000578358 77 ntBASIC1.81□□□□□ -2.12
ERCC4Q92889 MIR3192-201ENST00000584920 77 ntBASIC1.81□□□□□ -2.12
ERCC4Q92889 AL096861.1-201ENST00000610899 123 ntBASIC1.81□□□□□ -2.12
ERCC4Q92889 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.81□□□□□ -2.12
ERCC4Q92889 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.81□□□□□ -2.12
ERCC4Q92889 MIR4251-201ENST00000635819 61 ntBASIC1.81□□□□□ -2.12
ERCC4Q92889 SNORA22.1-201ENST00000362701 134 ntBASIC1.8□□□□□ -2.12
ERCC4Q92889 RNU6-880P-201ENST00000384526 107 ntBASIC1.8□□□□□ -2.12
ERCC4Q92889 Y_RNA.531-201ENST00000384589 121 ntBASIC1.8□□□□□ -2.12
ERCC4Q92889 MIR548A1-201ENST00000385041 97 ntBASIC1.8□□□□□ -2.12
ERCC4Q92889 AC027119.1-201ENST00000440877 241 ntBASIC1.8□□□□□ -2.12
ERCC4Q92889 HSPE1P24-201ENST00000450782 238 ntBASIC1.8□□□□□ -2.12
ERCC4Q92889 snoU13.25-201ENST00000458945 104 ntBASIC1.8□□□□□ -2.12
ERCC4Q92889 Y_RNA.676-201ENST00000516393 96 ntBASIC1.8□□□□□ -2.12
ERCC4Q92889 SNORA25.15-201ENST00000516487 89 ntBASIC1.8□□□□□ -2.12
ERCC4Q92889 MIR548AO-201ENST00000579992 96 ntBASIC1.8□□□□□ -2.12
ERCC4Q92889 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.8□□□□□ -2.12
ERCC4Q92889 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
ERCC4Q92889 RNA5SP48-201ENST00000363969 126 ntBASIC1.79□□□□□ -2.12
ERCC4Q92889 Y_RNA.213-201ENST00000364178 111 ntBASIC1.79□□□□□ -2.12
ERCC4Q92889 Y_RNA.281-201ENST00000364774 94 ntBASIC1.79□□□□□ -2.12
ERCC4Q92889 RNU6-44P-201ENST00000384045 107 ntBASIC1.79□□□□□ -2.12
ERCC4Q92889 MTATP6P29-201ENST00000415057 132 ntBASIC1.79□□□□□ -2.12
ERCC4Q92889 HMGN1P33-201ENST00000432945 451 ntBASIC1.79□□□□□ -2.12
ERCC4Q92889 RPS23P4-201ENST00000487908 423 ntBASIC1.79□□□□□ -2.12
ERCC4Q92889 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.79□□□□□ -2.12
ERCC4Q92889 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.79□□□□□ -2.12
ERCC4Q92889 MIR4255-201ENST00000579351 72 ntBASIC1.79□□□□□ -2.12
ERCC4Q92889 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
ERCC4Q92889 MIR8063-201ENST00000621930 81 ntBASIC1.79□□□□□ -2.12
ERCC4Q92889 AP000648.3-201ENST00000623539 4507 ntBASIC1.78□□□□□ -2.12
ERCC4Q92889 SNORD33-201ENST00000362761 85 ntBASIC1.78□□□□□ -2.12
ERCC4Q92889 RNU6-755P-201ENST00000364400 103 ntBASIC1.78□□□□□ -2.12
ERCC4Q92889 MIR1302-7-201ENST00000408841 72 ntBASIC1.78□□□□□ -2.12
ERCC4Q92889 AC079140.2-201ENST00000506193 142 ntBASIC1.78□□□□□ -2.12
ERCC4Q92889 AP003716.2-201ENST00000528260 108 ntBASIC1.78□□□□□ -2.12
ERCC4Q92889 AC007012.1-201ENST00000567192 175 ntBASIC1.78□□□□□ -2.12
ERCC4Q92889 MIR4422-201ENST00000581938 83 ntBASIC1.78□□□□□ -2.12
ERCC4Q92889 MIR8065-201ENST00000620577 100 ntBASIC1.78□□□□□ -2.12
ERCC4Q92889 RNY4P6-201ENST00000363667 96 ntBASIC1.77□□□□□ -2.13
ERCC4Q92889 Y_RNA.171-201ENST00000363760 102 ntBASIC1.77□□□□□ -2.13
ERCC4Q92889 RNA5SP99-201ENST00000364020 114 ntBASIC1.77□□□□□ -2.13
ERCC4Q92889 MIR1323-201ENST00000408090 73 ntBASIC1.77□□□□□ -2.13
ERCC4Q92889 RPS3AP1-201ENST00000413190 320 ntBASIC1.77□□□□□ -2.13
ERCC4Q92889 AC009474.2-201ENST00000451383 136 ntBASIC1.77□□□□□ -2.13
ERCC4Q92889 AC113410.1-201ENST00000505029 247 ntBASIC1.77□□□□□ -2.13
ERCC4Q92889 RNU1-17P-201ENST00000363022 152 ntBASIC1.76□□□□□ -2.13
ERCC4Q92889 SNORA1.1-201ENST00000364671 133 ntBASIC1.76□□□□□ -2.13
ERCC4Q92889 MIR320A-201ENST00000385302 82 ntBASIC1.76□□□□□ -2.13
ERCC4Q92889 RNU1-78P-201ENST00000391248 165 ntBASIC1.76□□□□□ -2.13
ERCC4Q92889 RNU6-602P-201ENST00000411155 105 ntBASIC1.76□□□□□ -2.13
ERCC4Q92889 AC090844.1-201ENST00000422019 156 ntBASIC1.76□□□□□ -2.13
ERCC4Q92889 MIR3163-201ENST00000581592 73 ntBASIC1.76□□□□□ -2.13
ERCC4Q92889 AP000942.3-201ENST00000603702 160 ntBASIC1.76□□□□□ -2.13
ERCC4Q92889 MIR502-201ENST00000606349 86 ntBASIC1.76□□□□□ -2.13
ERCC4Q92889 RNA5SP190-201ENST00000365222 118 ntBASIC1.75□□□□□ -2.13
ERCC4Q92889 Y_RNA.470-201ENST00000384307 117 ntBASIC1.75□□□□□ -2.13
ERCC4Q92889 Y_RNA.549-201ENST00000384657 102 ntBASIC1.75□□□□□ -2.13
ERCC4Q92889 RNU7-113P-201ENST00000459273 62 ntBASIC1.75□□□□□ -2.13
ERCC4Q92889 AL035470.1-201ENST00000622571 220 ntBASIC1.75□□□□□ -2.13
ERCC4Q92889 Y_RNA.299-201ENST00000364973 94 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 187.7 ms