Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RNA5SP136-201ENST00000410906 107 ntBASIC1.4□□□□□ -2.18
SNED1Q8TER0 RPS29P23-201ENST00000458635 123 ntBASIC1.4□□□□□ -2.18
SNED1Q8TER0 snoU13.9-201ENST00000458927 103 ntBASIC1.4□□□□□ -2.18
SNED1Q8TER0 RNU6-240P-201ENST00000516098 97 ntBASIC1.4□□□□□ -2.18
SNED1Q8TER0 MIR4679-2-201ENST00000578358 77 ntBASIC1.4□□□□□ -2.18
SNED1Q8TER0 AC069114.2-201ENST00000604699 304 ntBASIC1.4□□□□□ -2.18
SNED1Q8TER0 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.4□□□□□ -2.18
SNED1Q8TER0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.4□□□□□ -2.18
SNED1Q8TER0 Y_RNA.351-201ENST00000365436 96 ntBASIC1.4□□□□□ -2.19
SNED1Q8TER0 SNORD38C-201ENST00000384381 69 ntBASIC1.4□□□□□ -2.19
SNED1Q8TER0 RNU6-880P-201ENST00000384526 107 ntBASIC1.4□□□□□ -2.19
SNED1Q8TER0 RNY1P4-201ENST00000384595 115 ntBASIC1.4□□□□□ -2.19
SNED1Q8TER0 RNU1-78P-201ENST00000391248 165 ntBASIC1.4□□□□□ -2.19
SNED1Q8TER0 HMGN2P32-201ENST00000444648 269 ntBASIC1.4□□□□□ -2.19
SNED1Q8TER0 RPS26P48-201ENST00000491713 339 ntBASIC1.4□□□□□ -2.19
SNED1Q8TER0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.4□□□□□ -2.19
SNED1Q8TER0 SNORD36C-201ENST00000516733 66 ntBASIC1.4□□□□□ -2.19
SNED1Q8TER0 SNORA18.7-201ENST00000516910 131 ntBASIC1.4□□□□□ -2.19
SNED1Q8TER0 AP003484.1-201ENST00000530974 250 ntBASIC1.4□□□□□ -2.19
SNED1Q8TER0 AC015726.2-201ENST00000620112 122 ntBASIC1.4□□□□□ -2.19
SNED1Q8TER0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SNED1Q8TER0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SNED1Q8TER0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.39□□□□□ -2.19
SNED1Q8TER0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
SNED1Q8TER0 MIR342-201ENST00000362212 99 ntBASIC1.39□□□□□ -2.19
SNED1Q8TER0 RNU1-133P-201ENST00000364867 167 ntBASIC1.39□□□□□ -2.19
SNED1Q8TER0 RNU6-690P-201ENST00000365242 106 ntBASIC1.39□□□□□ -2.19
SNED1Q8TER0 RNU6-147P-201ENST00000383983 107 ntBASIC1.39□□□□□ -2.19
SNED1Q8TER0 RNU2-7P-201ENST00000410794 178 ntBASIC1.39□□□□□ -2.19
SNED1Q8TER0 CALM2P4-201ENST00000430810 426 ntBASIC1.39□□□□□ -2.19
SNED1Q8TER0 AC069257.2-201ENST00000441819 155 ntBASIC1.39□□□□□ -2.19
SNED1Q8TER0 AC087499.4-201ENST00000448505 178 ntBASIC1.39□□□□□ -2.19
SNED1Q8TER0 SNORA31.10-201ENST00000516482 106 ntBASIC1.39□□□□□ -2.19
SNED1Q8TER0 AC019176.1-201ENST00000518519 225 ntBASIC1.39□□□□□ -2.19
SNED1Q8TER0 AC007012.1-201ENST00000567192 175 ntBASIC1.39□□□□□ -2.19
SNED1Q8TER0 MIR5000-201ENST00000577717 103 ntBASIC1.39□□□□□ -2.19
SNED1Q8TER0 MIR3613-201ENST00000579844 87 ntBASIC1.39□□□□□ -2.19
SNED1Q8TER0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
SNED1Q8TER0 MIRLET7C-201ENST00000362160 84 ntBASIC1.38□□□□□ -2.19
SNED1Q8TER0 RNU6-414P-201ENST00000363705 104 ntBASIC1.38□□□□□ -2.19
SNED1Q8TER0 Y_RNA.440-201ENST00000384120 114 ntBASIC1.38□□□□□ -2.19
SNED1Q8TER0 MIR759-201ENST00000390224 91 ntBASIC1.38□□□□□ -2.19
SNED1Q8TER0 AL034345.1-201ENST00000407768 123 ntBASIC1.38□□□□□ -2.19
SNED1Q8TER0 RNU6-938P-201ENST00000411285 103 ntBASIC1.38□□□□□ -2.19
SNED1Q8TER0 AC015922.2-201ENST00000435593 184 ntBASIC1.38□□□□□ -2.19
SNED1Q8TER0 RNU7-80P-201ENST00000459562 61 ntBASIC1.38□□□□□ -2.19
SNED1Q8TER0 COX6CP6-201ENST00000490840 228 ntBASIC1.38□□□□□ -2.19
SNED1Q8TER0 RNU6-412P-201ENST00000516434 106 ntBASIC1.38□□□□□ -2.19
SNED1Q8TER0 SNORA31.17-201ENST00000516953 127 ntBASIC1.38□□□□□ -2.19
SNED1Q8TER0 MIR4778-201ENST00000577635 80 ntBASIC1.38□□□□□ -2.19
SNED1Q8TER0 AC027279.3-201ENST00000625055 122 ntBASIC1.38□□□□□ -2.19
SNED1Q8TER0 RNU6-349P-201ENST00000362402 107 ntBASIC1.37□□□□□ -2.19
SNED1Q8TER0 RNU6-950P-201ENST00000384651 107 ntBASIC1.37□□□□□ -2.19
SNED1Q8TER0 MIR570-201ENST00000384917 97 ntBASIC1.37□□□□□ -2.19
SNED1Q8TER0 U8.16-201ENST00000391279 133 ntBASIC1.37□□□□□ -2.19
SNED1Q8TER0 U8.17-201ENST00000391292 132 ntBASIC1.37□□□□□ -2.19
SNED1Q8TER0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.37□□□□□ -2.19
SNED1Q8TER0 RNU7-12P-201ENST00000516030 62 ntBASIC1.37□□□□□ -2.19
SNED1Q8TER0 RNA5SP168-201ENST00000516642 112 ntBASIC1.37□□□□□ -2.19
SNED1Q8TER0 AL596211.1-201ENST00000569873 2277 ntBASIC1.37□□□□□ -2.19
SNED1Q8TER0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SNED1Q8TER0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SNED1Q8TER0 SNORA4.2-201ENST00000365313 147 ntBASIC1.36□□□□□ -2.19
SNED1Q8TER0 RNY1P6-201ENST00000384193 109 ntBASIC1.36□□□□□ -2.19
SNED1Q8TER0 Y_RNA.454-201ENST00000384224 113 ntBASIC1.36□□□□□ -2.19
SNED1Q8TER0 RNU6-424P-201ENST00000384367 105 ntBASIC1.36□□□□□ -2.19
SNED1Q8TER0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
SNED1Q8TER0 RNU6-360P-201ENST00000390944 104 ntBASIC1.36□□□□□ -2.19
SNED1Q8TER0 SNX2P2-201ENST00000424553 323 ntBASIC1.36□□□□□ -2.19
SNED1Q8TER0 HSPE1P9-201ENST00000440046 311 ntBASIC1.36□□□□□ -2.19
SNED1Q8TER0 AC021443.1-201ENST00000604478 211 ntBASIC1.36□□□□□ -2.19
SNED1Q8TER0 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.35□□□□□ -2.19
SNED1Q8TER0 RNU6-833P-201ENST00000363486 107 ntBASIC1.35□□□□□ -2.19
SNED1Q8TER0 Y_RNA.198-201ENST00000364013 98 ntBASIC1.35□□□□□ -2.19
SNED1Q8TER0 Y_RNA.241-201ENST00000364470 117 ntBASIC1.35□□□□□ -2.19
SNED1Q8TER0 RNU6-1107P-201ENST00000364817 104 ntBASIC1.35□□□□□ -2.19
SNED1Q8TER0 RNU6-997P-201ENST00000384725 107 ntBASIC1.35□□□□□ -2.19
SNED1Q8TER0 AL031737.1-201ENST00000450125 223 ntBASIC1.35□□□□□ -2.19
SNED1Q8TER0 RNU7-164P-201ENST00000459221 62 ntBASIC1.35□□□□□ -2.19
SNED1Q8TER0 RNY4P20-201ENST00000516678 93 ntBASIC1.35□□□□□ -2.19
SNED1Q8TER0 SUMO2P16-201ENST00000519475 264 ntBASIC1.35□□□□□ -2.19
SNED1Q8TER0 HSPE1P19-201ENST00000603327 295 ntBASIC1.35□□□□□ -2.19
SNED1Q8TER0 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.35□□□□□ -2.19
SNED1Q8TER0 MIR302B-201ENST00000362188 73 ntBASIC1.34□□□□□ -2.19
SNED1Q8TER0 MIR450A1-201ENST00000362262 91 ntBASIC1.34□□□□□ -2.19
SNED1Q8TER0 RNU6-1298P-201ENST00000362456 101 ntBASIC1.34□□□□□ -2.19
SNED1Q8TER0 Y_RNA.68-201ENST00000362881 102 ntBASIC1.34□□□□□ -2.19
SNED1Q8TER0 RNU6-112P-201ENST00000363599 104 ntBASIC1.34□□□□□ -2.19
SNED1Q8TER0 RNY4P6-201ENST00000363667 96 ntBASIC1.34□□□□□ -2.19
SNED1Q8TER0 SNORA63D-201ENST00000364359 132 ntBASIC1.34□□□□□ -2.19
SNED1Q8TER0 Y_RNA.281-201ENST00000364774 94 ntBASIC1.34□□□□□ -2.19
SNED1Q8TER0 SNORA27-201ENST00000384323 126 ntBASIC1.34□□□□□ -2.19
SNED1Q8TER0 Y_RNA.549-201ENST00000384657 102 ntBASIC1.34□□□□□ -2.19
SNED1Q8TER0 RNU6-1031P-201ENST00000384773 107 ntBASIC1.34□□□□□ -2.19
SNED1Q8TER0 MIR520A-201ENST00000384862 85 ntBASIC1.34□□□□□ -2.19
SNED1Q8TER0 SNORD12C-201ENST00000386307 89 ntBASIC1.34□□□□□ -2.19
SNED1Q8TER0 MIR1267-201ENST00000408723 78 ntBASIC1.34□□□□□ -2.19
SNED1Q8TER0 RNA5SP89-201ENST00000410300 108 ntBASIC1.34□□□□□ -2.19
SNED1Q8TER0 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.34□□□□□ -2.19
SNED1Q8TER0 AC087343.1-201ENST00000477341 475 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 214.6 ms