Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 MIR548D2-201ENST00000384955 97 ntBASIC1.78□□□□□ -2.12
HIPK4Q8NE63 SNORD12C-201ENST00000386307 89 ntBASIC1.78□□□□□ -2.12
HIPK4Q8NE63 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.78□□□□□ -2.12
HIPK4Q8NE63 AC008834.1-201ENST00000511612 175 ntBASIC1.78□□□□□ -2.12
HIPK4Q8NE63 MIR4419B-201ENST00000577260 68 ntBASIC1.78□□□□□ -2.12
HIPK4Q8NE63 MIR4648-201ENST00000580107 72 ntBASIC1.78□□□□□ -2.12
HIPK4Q8NE63 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
HIPK4Q8NE63 MIR8065-201ENST00000620577 100 ntBASIC1.78□□□□□ -2.12
HIPK4Q8NE63 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HIPK4Q8NE63 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.78□□□□□ -2.13
HIPK4Q8NE63 AP000648.3-201ENST00000623539 4507 ntBASIC1.78□□□□□ -2.13
HIPK4Q8NE63 Y_RNA.85-201ENST00000363014 111 ntBASIC1.77□□□□□ -2.13
HIPK4Q8NE63 RNA5SP126-201ENST00000365092 109 ntBASIC1.77□□□□□ -2.13
HIPK4Q8NE63 Y_RNA.344-201ENST00000365381 112 ntBASIC1.77□□□□□ -2.13
HIPK4Q8NE63 AC019129.1-201ENST00000403786 261 ntBASIC1.77□□□□□ -2.13
HIPK4Q8NE63 MIR1302-7-201ENST00000408841 72 ntBASIC1.77□□□□□ -2.13
HIPK4Q8NE63 RNU6-602P-201ENST00000411155 105 ntBASIC1.77□□□□□ -2.13
HIPK4Q8NE63 AC027119.1-201ENST00000440877 241 ntBASIC1.77□□□□□ -2.13
HIPK4Q8NE63 AC079140.2-201ENST00000506193 142 ntBASIC1.77□□□□□ -2.13
HIPK4Q8NE63 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.77□□□□□ -2.13
HIPK4Q8NE63 MIR3198-2-201ENST00000577868 80 ntBASIC1.77□□□□□ -2.13
HIPK4Q8NE63 ZNF355P-201ENST00000427301 3216 ntBASIC1.77□□□□□ -2.13
HIPK4Q8NE63 MIR1270-201ENST00000459320 83 ntBASIC1.76□□□□□ -2.13
HIPK4Q8NE63 RNU7-6P-201ENST00000516845 62 ntBASIC1.76□□□□□ -2.13
HIPK4Q8NE63 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.76□□□□□ -2.13
HIPK4Q8NE63 MIR548AE2-201ENST00000583456 67 ntBASIC1.76□□□□□ -2.13
HIPK4Q8NE63 AP000942.3-201ENST00000603702 160 ntBASIC1.76□□□□□ -2.13
HIPK4Q8NE63 AC087741.2-201ENST00000619415 172 ntBASIC1.76□□□□□ -2.13
HIPK4Q8NE63 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.75□□□□□ -2.13
HIPK4Q8NE63 RNU4-69P-201ENST00000410677 143 ntBASIC1.75□□□□□ -2.13
HIPK4Q8NE63 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HIPK4Q8NE63 RNU6-412P-201ENST00000516434 106 ntBASIC1.75□□□□□ -2.13
HIPK4Q8NE63 RNA5SP33-201ENST00000516687 98 ntBASIC1.75□□□□□ -2.13
HIPK4Q8NE63 CYP3A52P-201ENST00000563326 91 ntBASIC1.75□□□□□ -2.13
HIPK4Q8NE63 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.75□□□□□ -2.13
HIPK4Q8NE63 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
HIPK4Q8NE63 SNORD33-201ENST00000362761 85 ntBASIC1.74□□□□□ -2.13
HIPK4Q8NE63 SNORA63.5-201ENST00000363548 123 ntBASIC1.74□□□□□ -2.13
HIPK4Q8NE63 RNU6-1107P-201ENST00000364817 104 ntBASIC1.74□□□□□ -2.13
HIPK4Q8NE63 Y_RNA.299-201ENST00000364973 94 ntBASIC1.74□□□□□ -2.13
HIPK4Q8NE63 RNA5SP445-201ENST00000515889 115 ntBASIC1.74□□□□□ -2.13
HIPK4Q8NE63 RNU6-947P-201ENST00000516264 106 ntBASIC1.74□□□□□ -2.13
HIPK4Q8NE63 AP003716.2-201ENST00000528260 108 ntBASIC1.74□□□□□ -2.13
HIPK4Q8NE63 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.74□□□□□ -2.13
HIPK4Q8NE63 AL589743.1-201ENST00000551932 2712 ntBASIC1.73□□□□□ -2.13
HIPK4Q8NE63 SNORA25.3-201ENST00000363205 127 ntBASIC1.73□□□□□ -2.13
HIPK4Q8NE63 SNORD48-201ENST00000364953 64 ntBASIC1.73□□□□□ -2.13
HIPK4Q8NE63 MIR934-201ENST00000401241 83 ntBASIC1.73□□□□□ -2.13
HIPK4Q8NE63 RNU6-165P-201ENST00000517170 99 ntBASIC1.73□□□□□ -2.13
HIPK4Q8NE63 MIR3664-201ENST00000579074 99 ntBASIC1.73□□□□□ -2.13
HIPK4Q8NE63 MIR3937-201ENST00000580135 106 ntBASIC1.73□□□□□ -2.13
HIPK4Q8NE63 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.73□□□□□ -2.13
HIPK4Q8NE63 PRELID3BP2-201ENST00000605362 201 ntBASIC1.73□□□□□ -2.13
HIPK4Q8NE63 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
HIPK4Q8NE63 SNORD115-19-201ENST00000363098 82 ntBASIC1.72□□□□□ -2.13
HIPK4Q8NE63 SNORD115-18-201ENST00000363293 82 ntBASIC1.72□□□□□ -2.13
HIPK4Q8NE63 SNORD115-17-201ENST00000364612 82 ntBASIC1.72□□□□□ -2.13
HIPK4Q8NE63 Y_RNA.773-201ENST00000607168 90 ntBASIC1.72□□□□□ -2.13
HIPK4Q8NE63 uc_338.28-201ENST00000612082 187 ntBASIC1.72□□□□□ -2.13
HIPK4Q8NE63 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
HIPK4Q8NE63 Y_RNA.116-201ENST00000363292 103 ntBASIC1.71□□□□□ -2.14
HIPK4Q8NE63 Y_RNA.323-201ENST00000365157 109 ntBASIC1.71□□□□□ -2.14
HIPK4Q8NE63 Y_RNA.354-201ENST00000365448 111 ntBASIC1.71□□□□□ -2.14
HIPK4Q8NE63 RNU6-106P-201ENST00000384405 107 ntBASIC1.71□□□□□ -2.14
HIPK4Q8NE63 RNU6-1065P-201ENST00000384513 106 ntBASIC1.71□□□□□ -2.14
HIPK4Q8NE63 RNU6-342P-201ENST00000384521 104 ntBASIC1.71□□□□□ -2.14
HIPK4Q8NE63 RNU1-78P-201ENST00000391248 165 ntBASIC1.71□□□□□ -2.14
HIPK4Q8NE63 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.71□□□□□ -2.14
HIPK4Q8NE63 RPS27P16-201ENST00000425758 201 ntBASIC1.71□□□□□ -2.14
HIPK4Q8NE63 AC245047.7-201ENST00000440265 293 ntBASIC1.71□□□□□ -2.14
HIPK4Q8NE63 RPL39P39-201ENST00000455840 151 ntBASIC1.71□□□□□ -2.14
HIPK4Q8NE63 RPL39P34-201ENST00000477141 156 ntBASIC1.71□□□□□ -2.14
HIPK4Q8NE63 RPL30P7-201ENST00000479312 323 ntBASIC1.71□□□□□ -2.14
HIPK4Q8NE63 AL512310.8-201ENST00000550183 120 ntBASIC1.71□□□□□ -2.14
HIPK4Q8NE63 MIR3618-201ENST00000580330 88 ntBASIC1.71□□□□□ -2.14
HIPK4Q8NE63 RNU6-94P-201ENST00000607728 107 ntBASIC1.71□□□□□ -2.14
HIPK4Q8NE63 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HIPK4Q8NE63 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
HIPK4Q8NE63 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.7□□□□□ -2.14
HIPK4Q8NE63 U8.6-201ENST00000364939 135 ntBASIC1.7□□□□□ -2.14
HIPK4Q8NE63 SNORA32-201ENST00000384072 121 ntBASIC1.7□□□□□ -2.14
HIPK4Q8NE63 SNORD38B-201ENST00000384690 67 ntBASIC1.7□□□□□ -2.14
HIPK4Q8NE63 RNU6-554P-201ENST00000410466 106 ntBASIC1.7□□□□□ -2.14
HIPK4Q8NE63 AL445685.2-201ENST00000422551 342 ntBASIC1.7□□□□□ -2.14
HIPK4Q8NE63 AC244023.1-201ENST00000426884 112 ntBASIC1.7□□□□□ -2.14
HIPK4Q8NE63 AL133373.1-201ENST00000497098 94 ntBASIC1.7□□□□□ -2.14
HIPK4Q8NE63 MIR4285-201ENST00000581001 85 ntBASIC1.7□□□□□ -2.14
HIPK4Q8NE63 AC242498.1-201ENST00000604134 111 ntBASIC1.7□□□□□ -2.14
HIPK4Q8NE63 SNORD38B-202ENST00000625943 69 ntBASIC1.7□□□□□ -2.14
HIPK4Q8NE63 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.7□□□□□ -2.14
HIPK4Q8NE63 MIR1255B1-201ENST00000636325 63 ntBASIC1.7□□□□□ -2.14
HIPK4Q8NE63 Y_RNA.49-201ENST00000362714 112 ntBASIC1.69□□□□□ -2.14
HIPK4Q8NE63 RNU6-1014P-201ENST00000383940 103 ntBASIC1.69□□□□□ -2.14
HIPK4Q8NE63 RNU6-147P-201ENST00000383983 107 ntBASIC1.69□□□□□ -2.14
HIPK4Q8NE63 MIR1185-1-201ENST00000408598 86 ntBASIC1.69□□□□□ -2.14
HIPK4Q8NE63 AC068339.1-201ENST00000526965 141 ntBASIC1.69□□□□□ -2.14
HIPK4Q8NE63 AL162726.3-218ENST00000636401 95 ntBASIC1.69□□□□□ -2.14
HIPK4Q8NE63 SNORA18-201ENST00000384416 132 ntBASIC1.68□□□□□ -2.14
HIPK4Q8NE63 AC003989.2-201ENST00000440224 169 ntBASIC1.68□□□□□ -2.14
HIPK4Q8NE63 AC245517.4-201ENST00000448601 281 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 219.6 ms