Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.58□□□□□ -2
SIX5Q8N196 RNU6-795P-201ENST00000516323 103 ntBASIC2.58□□□□□ -2
SIX5Q8N196 SNORD111.1-201ENST00000516421 86 ntBASIC2.58□□□□□ -2
SIX5Q8N196 SNORA31.11-201ENST00000516528 139 ntBASIC2.58□□□□□ -2
SIX5Q8N196 MIR1273D-201ENST00000577266 86 ntBASIC2.58□□□□□ -2
SIX5Q8N196 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
SIX5Q8N196 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SIX5Q8N196 Y_RNA.377-201ENST00000365644 108 ntBASIC2.57□□□□□ -2
SIX5Q8N196 RNU6-1201P-201ENST00000384227 107 ntBASIC2.57□□□□□ -2
SIX5Q8N196 MIR4287-201ENST00000579398 78 ntBASIC2.57□□□□□ -2
SIX5Q8N196 MIR8065-201ENST00000620577 100 ntBASIC2.57□□□□□ -2
SIX5Q8N196 Z82195.2-201ENST00000612348 18351 ntBASIC2.57□□□□□ -2
SIX5Q8N196 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.56□□□□□ -2
SIX5Q8N196 RNU6-1313P-201ENST00000362622 102 ntBASIC2.56□□□□□ -2
SIX5Q8N196 SNORD114-1-201ENST00000362705 72 ntBASIC2.56□□□□□ -2
SIX5Q8N196 RNU6-1134P-201ENST00000365156 101 ntBASIC2.56□□□□□ -2
SIX5Q8N196 DEFA7P-201ENST00000382676 285 ntBASIC2.56□□□□□ -2
SIX5Q8N196 SNORD38B-201ENST00000384690 67 ntBASIC2.56□□□□□ -2
SIX5Q8N196 RNA5SP181-201ENST00000410246 98 ntBASIC2.56□□□□□ -2
SIX5Q8N196 RNU6-602P-201ENST00000411155 105 ntBASIC2.56□□□□□ -2
SIX5Q8N196 RNA5SP247-201ENST00000411181 105 ntBASIC2.56□□□□□ -2
SIX5Q8N196 AL353813.1-201ENST00000440700 253 ntBASIC2.56□□□□□ -2
SIX5Q8N196 RNU7-61P-201ENST00000515897 61 ntBASIC2.56□□□□□ -2
SIX5Q8N196 RNU7-2P-201ENST00000516096 62 ntBASIC2.56□□□□□ -2
SIX5Q8N196 SNORA9.3-201ENST00000516383 129 ntBASIC2.56□□□□□ -2
SIX5Q8N196 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.56□□□□□ -2
SIX5Q8N196 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.56□□□□□ -2
SIX5Q8N196 MIR548AO-201ENST00000579992 96 ntBASIC2.56□□□□□ -2
SIX5Q8N196 AC012531.4-201ENST00000616509 177 ntBASIC2.56□□□□□ -2
SIX5Q8N196 SNORD38B-202ENST00000625943 69 ntBASIC2.56□□□□□ -2
SIX5Q8N196 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.55□□□□□ -2
SIX5Q8N196 RNA5SP48-201ENST00000363969 126 ntBASIC2.55□□□□□ -2
SIX5Q8N196 SNORD115-35-201ENST00000365122 82 ntBASIC2.55□□□□□ -2
SIX5Q8N196 AL359511.1-201ENST00000402970 211 ntBASIC2.55□□□□□ -2
SIX5Q8N196 RNU6-1086P-201ENST00000410930 100 ntBASIC2.55□□□□□ -2
SIX5Q8N196 AC096949.1-201ENST00000412047 152 ntBASIC2.55□□□□□ -2
SIX5Q8N196 AC108729.3-201ENST00000513484 108 ntBASIC2.55□□□□□ -2
SIX5Q8N196 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.55□□□□□ -2
SIX5Q8N196 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.55□□□□□ -2
SIX5Q8N196 AL353997.5-201ENST00000618886 171 ntBASIC2.55□□□□□ -2
SIX5Q8N196 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
SIX5Q8N196 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
SIX5Q8N196 RNU6-439P-201ENST00000384188 106 ntBASIC2.54□□□□□ -2
SIX5Q8N196 MRPL35P3-201ENST00000421557 364 ntBASIC2.54□□□□□ -2
SIX5Q8N196 RNU7-41P-201ENST00000515917 61 ntBASIC2.54□□□□□ -2
SIX5Q8N196 RNA5SP458-201ENST00000516188 119 ntBASIC2.54□□□□□ -2
SIX5Q8N196 RNU6-922P-201ENST00000516753 99 ntBASIC2.54□□□□□ -2
SIX5Q8N196 RNU6-762P-201ENST00000517107 102 ntBASIC2.54□□□□□ -2
SIX5Q8N196 RNU7-35P-201ENST00000517174 62 ntBASIC2.54□□□□□ -2
SIX5Q8N196 AL357312.1-201ENST00000603879 298 ntBASIC2.54□□□□□ -2
SIX5Q8N196 SNORA6-201ENST00000384033 151 ntBASIC2.53□□□□□ -2
SIX5Q8N196 MIR144-201ENST00000384886 86 ntBASIC2.53□□□□□ -2
SIX5Q8N196 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.53□□□□□ -2
SIX5Q8N196 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.53□□□□□ -2
SIX5Q8N196 RNU6-644P-201ENST00000391155 98 ntBASIC2.53□□□□□ -2
SIX5Q8N196 RNA5SP237-201ENST00000410414 113 ntBASIC2.53□□□□□ -2
SIX5Q8N196 RPL31P63-201ENST00000422565 375 ntBASIC2.53□□□□□ -2
SIX5Q8N196 Y_RNA.95-201ENST00000363079 95 ntBASIC2.52□□□□□ -2.01
SIX5Q8N196 MIR206-201ENST00000384872 86 ntBASIC2.52□□□□□ -2.01
SIX5Q8N196 RNY4P29-201ENST00000410801 97 ntBASIC2.52□□□□□ -2.01
SIX5Q8N196 AL161935.2-201ENST00000414627 60 ntBASIC2.52□□□□□ -2.01
SIX5Q8N196 AC244636.1-201ENST00000421152 228 ntBASIC2.52□□□□□ -2.01
SIX5Q8N196 AC046143.2-201ENST00000609789 160 ntBASIC2.52□□□□□ -2.01
SIX5Q8N196 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
SIX5Q8N196 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
SIX5Q8N196 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
SIX5Q8N196 RNU6-865P-201ENST00000364772 107 ntBASIC2.51□□□□□ -2.01
SIX5Q8N196 RNU6-60P-201ENST00000364792 103 ntBASIC2.51□□□□□ -2.01
SIX5Q8N196 RNU6-1237P-201ENST00000384777 107 ntBASIC2.51□□□□□ -2.01
SIX5Q8N196 RNU7-79P-201ENST00000516082 62 ntBASIC2.51□□□□□ -2.01
SIX5Q8N196 RNA5SP402-201ENST00000517148 110 ntBASIC2.51□□□□□ -2.01
SIX5Q8N196 AC026421.1-201ENST00000519101 163 ntBASIC2.51□□□□□ -2.01
SIX5Q8N196 AC121758.2-201ENST00000553271 193 ntBASIC2.51□□□□□ -2.01
SIX5Q8N196 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.51□□□□□ -2.01
SIX5Q8N196 AL773524.1-201ENST00000614065 229 ntBASIC2.51□□□□□ -2.01
SIX5Q8N196 U7.3-201ENST00000616123 62 ntBASIC2.51□□□□□ -2.01
SIX5Q8N196 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.51□□□□□ -2.01
SIX5Q8N196 AC080100.1-201ENST00000624239 5356 ntBASIC2.51□□□□□ -2.01
SIX5Q8N196 Y_RNA.290-201ENST00000364879 114 ntBASIC2.5□□□□□ -2.01
SIX5Q8N196 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SIX5Q8N196 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.5□□□□□ -2.01
SIX5Q8N196 RPS29P28-201ENST00000446439 141 ntBASIC2.5□□□□□ -2.01
SIX5Q8N196 AC009474.2-201ENST00000451383 136 ntBASIC2.5□□□□□ -2.01
SIX5Q8N196 RNU6-162P-201ENST00000516228 103 ntBASIC2.5□□□□□ -2.01
SIX5Q8N196 SNORD67.1-201ENST00000516618 108 ntBASIC2.5□□□□□ -2.01
SIX5Q8N196 Y_RNA.705-201ENST00000516862 110 ntBASIC2.5□□□□□ -2.01
SIX5Q8N196 AL137847.3-201ENST00000611521 109 ntBASIC2.5□□□□□ -2.01
SIX5Q8N196 MIR6873-201ENST00000622788 63 ntBASIC2.5□□□□□ -2.01
SIX5Q8N196 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
SIX5Q8N196 RPS12P2-201ENST00000439728 269 ntBASIC2.49□□□□□ -2.01
SIX5Q8N196 MIR8074-201ENST00000615081 81 ntBASIC2.49□□□□□ -2.01
SIX5Q8N196 AC091304.10-201ENST00000641554 121 ntBASIC2.49□□□□□ -2.01
SIX5Q8N196 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SIX5Q8N196 WWP1P1-201ENST00000466609 2769 ntBASIC2.49□□□□□ -2.01
SIX5Q8N196 Y_RNA.448-201ENST00000384185 108 ntBASIC2.48□□□□□ -2.01
SIX5Q8N196 MIR450A2-201ENST00000385022 100 ntBASIC2.48□□□□□ -2.01
SIX5Q8N196 SNORD41-201ENST00000386967 70 ntBASIC2.48□□□□□ -2.01
SIX5Q8N196 AC090844.1-201ENST00000422019 156 ntBASIC2.48□□□□□ -2.01
SIX5Q8N196 MIR4713-201ENST00000582691 75 ntBASIC2.48□□□□□ -2.01
SIX5Q8N196 MIR4439-201ENST00000583746 80 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms