Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 MIR3192-201ENST00000584920 77 ntBASIC1.52□□□□□ -2.17
SFTPA1Q8IWL2 GHRLOS.1-201ENST00000610995 70 ntBASIC1.52□□□□□ -2.17
SFTPA1Q8IWL2 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SFTPA1Q8IWL2 MIR3914-2-201ENST00000637339 95 ntBASIC1.52□□□□□ -2.17
SFTPA1Q8IWL2 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SFTPA1Q8IWL2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.51□□□□□ -2.17
SFTPA1Q8IWL2 RNY1P10-201ENST00000363268 113 ntBASIC1.51□□□□□ -2.17
SFTPA1Q8IWL2 SNORA24-201ENST00000384096 131 ntBASIC1.51□□□□□ -2.17
SFTPA1Q8IWL2 MIR1263-201ENST00000408324 86 ntBASIC1.51□□□□□ -2.17
SFTPA1Q8IWL2 RNU6-1190P-201ENST00000410811 104 ntBASIC1.51□□□□□ -2.17
SFTPA1Q8IWL2 AC008834.1-201ENST00000511612 175 ntBASIC1.51□□□□□ -2.17
SFTPA1Q8IWL2 Y_RNA.712-201ENST00000517011 92 ntBASIC1.51□□□□□ -2.17
SFTPA1Q8IWL2 RNU1-92P-201ENST00000517017 135 ntBASIC1.51□□□□□ -2.17
SFTPA1Q8IWL2 AL096861.1-201ENST00000610899 123 ntBASIC1.51□□□□□ -2.17
SFTPA1Q8IWL2 MIR4251-201ENST00000635819 61 ntBASIC1.51□□□□□ -2.17
SFTPA1Q8IWL2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SFTPA1Q8IWL2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SFTPA1Q8IWL2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SFTPA1Q8IWL2 MIR337-201ENST00000362281 93 ntBASIC1.5□□□□□ -2.17
SFTPA1Q8IWL2 RNA5SP363-201ENST00000365072 115 ntBASIC1.5□□□□□ -2.17
SFTPA1Q8IWL2 SNORD20-201ENST00000384550 80 ntBASIC1.5□□□□□ -2.17
SFTPA1Q8IWL2 MIR517C-201ENST00000385103 95 ntBASIC1.5□□□□□ -2.17
SFTPA1Q8IWL2 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.5□□□□□ -2.17
SFTPA1Q8IWL2 MIR1304-201ENST00000408243 91 ntBASIC1.5□□□□□ -2.17
SFTPA1Q8IWL2 RN7SKP179-201ENST00000516126 217 ntBASIC1.5□□□□□ -2.17
SFTPA1Q8IWL2 RNU6-113P-201ENST00000516653 101 ntBASIC1.5□□□□□ -2.17
SFTPA1Q8IWL2 SNORA31.24-201ENST00000517232 57 ntBASIC1.5□□□□□ -2.17
SFTPA1Q8IWL2 AL357312.1-201ENST00000603879 298 ntBASIC1.5□□□□□ -2.17
SFTPA1Q8IWL2 AL137067.1-201ENST00000615933 120 ntBASIC1.5□□□□□ -2.17
SFTPA1Q8IWL2 MIR7111-201ENST00000619751 72 ntBASIC1.5□□□□□ -2.17
SFTPA1Q8IWL2 ZNF209P-201ENST00000593450 2304 ntBASIC1.5□□□□□ -2.17
SFTPA1Q8IWL2 Y_RNA.353-201ENST00000365440 108 ntBASIC1.49□□□□□ -2.17
SFTPA1Q8IWL2 RNU6-1065P-201ENST00000384513 106 ntBASIC1.49□□□□□ -2.17
SFTPA1Q8IWL2 RNU6-429P-201ENST00000384582 108 ntBASIC1.49□□□□□ -2.17
SFTPA1Q8IWL2 HMGN1P33-201ENST00000432945 451 ntBASIC1.49□□□□□ -2.17
SFTPA1Q8IWL2 AC027119.1-201ENST00000440877 241 ntBASIC1.49□□□□□ -2.17
SFTPA1Q8IWL2 RNU7-73P-201ENST00000458743 63 ntBASIC1.49□□□□□ -2.17
SFTPA1Q8IWL2 MTND5P34-201ENST00000568888 325 ntBASIC1.49□□□□□ -2.17
SFTPA1Q8IWL2 AC021443.1-201ENST00000604478 211 ntBASIC1.49□□□□□ -2.17
SFTPA1Q8IWL2 AC012493.3-201ENST00000604494 112 ntBASIC1.49□□□□□ -2.17
SFTPA1Q8IWL2 MIR6129-201ENST00000616087 109 ntBASIC1.49□□□□□ -2.17
SFTPA1Q8IWL2 SNORD33-201ENST00000362761 85 ntBASIC1.48□□□□□ -2.17
SFTPA1Q8IWL2 RNU6-392P-201ENST00000364926 101 ntBASIC1.48□□□□□ -2.17
SFTPA1Q8IWL2 RNU6-53P-201ENST00000365367 106 ntBASIC1.48□□□□□ -2.17
SFTPA1Q8IWL2 MIR499A-201ENST00000384903 122 ntBASIC1.48□□□□□ -2.17
SFTPA1Q8IWL2 Y_RNA.629-201ENST00000411368 105 ntBASIC1.48□□□□□ -2.17
SFTPA1Q8IWL2 snoU13.16-201ENST00000459350 104 ntBASIC1.48□□□□□ -2.17
SFTPA1Q8IWL2 RNY4P20-201ENST00000516678 93 ntBASIC1.48□□□□□ -2.17
SFTPA1Q8IWL2 MIR3122-201ENST00000577243 73 ntBASIC1.48□□□□□ -2.17
SFTPA1Q8IWL2 MIR548AO-201ENST00000579992 96 ntBASIC1.48□□□□□ -2.17
SFTPA1Q8IWL2 AC025166.1-201ENST00000612411 163 ntBASIC1.48□□□□□ -2.17
SFTPA1Q8IWL2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
SFTPA1Q8IWL2 AC021613.1-201ENST00000623880 111 ntBASIC1.48□□□□□ -2.17
SFTPA1Q8IWL2 SNORA25.3-201ENST00000363205 127 ntBASIC1.47□□□□□ -2.17
SFTPA1Q8IWL2 Y_RNA.273-201ENST00000364703 102 ntBASIC1.47□□□□□ -2.17
SFTPA1Q8IWL2 SNORA25.9-201ENST00000365087 128 ntBASIC1.47□□□□□ -2.17
SFTPA1Q8IWL2 Y_RNA.563-201ENST00000384707 108 ntBASIC1.47□□□□□ -2.17
SFTPA1Q8IWL2 MIRLET7F2-201ENST00000385277 83 ntBASIC1.47□□□□□ -2.17
SFTPA1Q8IWL2 RPS27P16-201ENST00000425758 201 ntBASIC1.47□□□□□ -2.17
SFTPA1Q8IWL2 RPL39P39-201ENST00000455840 151 ntBASIC1.47□□□□□ -2.17
SFTPA1Q8IWL2 AL020996.3-201ENST00000606617 222 ntBASIC1.47□□□□□ -2.17
SFTPA1Q8IWL2 AL157834.3-201ENST00000615543 103 ntBASIC1.47□□□□□ -2.17
SFTPA1Q8IWL2 AL161722.3-201ENST00000605789 2983 ntBASIC1.47□□□□□ -2.17
SFTPA1Q8IWL2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
SFTPA1Q8IWL2 MTND5P18-201ENST00000445624 1801 ntBASIC1.46□□□□□ -2.18
SFTPA1Q8IWL2 RNU6-1325P-201ENST00000364905 105 ntBASIC1.46□□□□□ -2.18
SFTPA1Q8IWL2 Y_RNA.528-201ENST00000384575 108 ntBASIC1.46□□□□□ -2.18
SFTPA1Q8IWL2 RNU6-476P-201ENST00000384726 107 ntBASIC1.46□□□□□ -2.18
SFTPA1Q8IWL2 RNU1-78P-201ENST00000391248 165 ntBASIC1.46□□□□□ -2.18
SFTPA1Q8IWL2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.46□□□□□ -2.18
SFTPA1Q8IWL2 snoU13.25-201ENST00000458945 104 ntBASIC1.46□□□□□ -2.18
SFTPA1Q8IWL2 RNU7-164P-201ENST00000459221 62 ntBASIC1.46□□□□□ -2.18
SFTPA1Q8IWL2 AL512310.8-201ENST00000550183 120 ntBASIC1.46□□□□□ -2.18
SFTPA1Q8IWL2 AC022523.2-201ENST00000561045 150 ntBASIC1.46□□□□□ -2.18
SFTPA1Q8IWL2 MIR3664-201ENST00000579074 99 ntBASIC1.46□□□□□ -2.18
SFTPA1Q8IWL2 MIR4305-201ENST00000583252 102 ntBASIC1.46□□□□□ -2.18
SFTPA1Q8IWL2 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SFTPA1Q8IWL2 RNA5SP48-201ENST00000363969 126 ntBASIC1.45□□□□□ -2.18
SFTPA1Q8IWL2 RNU6-215P-201ENST00000365169 102 ntBASIC1.45□□□□□ -2.18
SFTPA1Q8IWL2 MT-TI-201ENST00000387365 69 ntBASIC1.45□□□□□ -2.18
SFTPA1Q8IWL2 RNU6-1319P-201ENST00000390855 104 ntBASIC1.45□□□□□ -2.18
SFTPA1Q8IWL2 RNU6-747P-201ENST00000390928 104 ntBASIC1.45□□□□□ -2.18
SFTPA1Q8IWL2 RNU6-241P-201ENST00000391148 104 ntBASIC1.45□□□□□ -2.18
SFTPA1Q8IWL2 SNORA26.6-201ENST00000391256 115 ntBASIC1.45□□□□□ -2.18
SFTPA1Q8IWL2 MIR1276-201ENST00000408707 83 ntBASIC1.45□□□□□ -2.18
SFTPA1Q8IWL2 RNU6-1064P-201ENST00000410626 104 ntBASIC1.45□□□□□ -2.18
SFTPA1Q8IWL2 RNU6-177P-201ENST00000411257 104 ntBASIC1.45□□□□□ -2.18
SFTPA1Q8IWL2 AC090844.1-201ENST00000422019 156 ntBASIC1.45□□□□□ -2.18
SFTPA1Q8IWL2 RNA5SP445-201ENST00000515889 115 ntBASIC1.45□□□□□ -2.18
SFTPA1Q8IWL2 RNU7-123P-201ENST00000515911 60 ntBASIC1.45□□□□□ -2.18
SFTPA1Q8IWL2 RNU2-35P-201ENST00000516446 142 ntBASIC1.45□□□□□ -2.18
SFTPA1Q8IWL2 MIR6717-201ENST00000622747 73 ntBASIC1.45□□□□□ -2.18
SFTPA1Q8IWL2 SNORA1.1-201ENST00000364671 133 ntBASIC1.44□□□□□ -2.18
SFTPA1Q8IWL2 RNU6-1144P-201ENST00000384247 104 ntBASIC1.44□□□□□ -2.18
SFTPA1Q8IWL2 RNU6-1104P-201ENST00000384723 104 ntBASIC1.44□□□□□ -2.18
SFTPA1Q8IWL2 MIR548A1-201ENST00000385041 97 ntBASIC1.44□□□□□ -2.18
SFTPA1Q8IWL2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SFTPA1Q8IWL2 RNA5SP144-201ENST00000410846 116 ntBASIC1.44□□□□□ -2.18
SFTPA1Q8IWL2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.44□□□□□ -2.18
SFTPA1Q8IWL2 RPL30P7-201ENST00000479312 323 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 223.4 ms