Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 RNU2-13P-201ENST00000515909 113 ntBASIC1.16□□□□□ -2.22
APLFQ8IW19 RNA5SP236-201ENST00000516169 116 ntBASIC1.16□□□□□ -2.22
APLFQ8IW19 AP001328.1-201ENST00000528550 176 ntBASIC1.16□□□□□ -2.22
APLFQ8IW19 MIR4295-201ENST00000585286 85 ntBASIC1.16□□□□□ -2.22
APLFQ8IW19 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.16□□□□□ -2.22
APLFQ8IW19 AL096861.1-201ENST00000610899 123 ntBASIC1.16□□□□□ -2.22
APLFQ8IW19 AC091932.4-201ENST00000623386 200 ntBASIC1.16□□□□□ -2.22
APLFQ8IW19 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.16□□□□□ -2.22
APLFQ8IW19 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
APLFQ8IW19 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
APLFQ8IW19 RNA5SP48-201ENST00000363969 126 ntBASIC1.15□□□□□ -2.23
APLFQ8IW19 RNU1-133P-201ENST00000364867 167 ntBASIC1.15□□□□□ -2.23
APLFQ8IW19 SNORD50.2-201ENST00000365465 70 ntBASIC1.15□□□□□ -2.23
APLFQ8IW19 SNORA24-201ENST00000384096 131 ntBASIC1.15□□□□□ -2.23
APLFQ8IW19 Y_RNA.454-201ENST00000384224 113 ntBASIC1.15□□□□□ -2.23
APLFQ8IW19 RNU6-257P-201ENST00000410238 98 ntBASIC1.15□□□□□ -2.23
APLFQ8IW19 AL035398.1-201ENST00000430869 322 ntBASIC1.15□□□□□ -2.23
APLFQ8IW19 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.15□□□□□ -2.23
APLFQ8IW19 Y_RNA.690-201ENST00000516603 95 ntBASIC1.15□□□□□ -2.23
APLFQ8IW19 RNU7-53P-201ENST00000516705 60 ntBASIC1.15□□□□□ -2.23
APLFQ8IW19 RNU6-958P-201ENST00000516995 106 ntBASIC1.15□□□□□ -2.23
APLFQ8IW19 MIR3664-201ENST00000579074 99 ntBASIC1.15□□□□□ -2.23
APLFQ8IW19 MIR3192-201ENST00000584920 77 ntBASIC1.15□□□□□ -2.23
APLFQ8IW19 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.15□□□□□ -2.23
APLFQ8IW19 MIR4251-201ENST00000635819 61 ntBASIC1.15□□□□□ -2.23
APLFQ8IW19 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
APLFQ8IW19 MIR302B-201ENST00000362188 73 ntBASIC1.14□□□□□ -2.23
APLFQ8IW19 RNU6-508P-201ENST00000363231 103 ntBASIC1.14□□□□□ -2.23
APLFQ8IW19 RNU6-704P-201ENST00000364162 103 ntBASIC1.14□□□□□ -2.23
APLFQ8IW19 SNORA40-201ENST00000388090 126 ntBASIC1.14□□□□□ -2.23
APLFQ8IW19 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
APLFQ8IW19 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.14□□□□□ -2.23
APLFQ8IW19 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.14□□□□□ -2.23
APLFQ8IW19 MTND4LP9-201ENST00000427694 174 ntBASIC1.14□□□□□ -2.23
APLFQ8IW19 RNU5E-3P-201ENST00000515913 68 ntBASIC1.14□□□□□ -2.23
APLFQ8IW19 AL121890.5-201ENST00000620848 304 ntBASIC1.14□□□□□ -2.23
APLFQ8IW19 MIR6734-201ENST00000621166 68 ntBASIC1.14□□□□□ -2.23
APLFQ8IW19 AP001340.1-201ENST00000624405 217 ntBASIC1.14□□□□□ -2.23
APLFQ8IW19 AL603914.1-201ENST00000401964 204 ntBASIC1.13□□□□□ -2.23
APLFQ8IW19 RN7SKP88-201ENST00000516847 250 ntBASIC1.13□□□□□ -2.23
APLFQ8IW19 RNU6-165P-201ENST00000517170 99 ntBASIC1.13□□□□□ -2.23
APLFQ8IW19 RNU6-902P-201ENST00000517212 91 ntBASIC1.13□□□□□ -2.23
APLFQ8IW19 AL022345.2-201ENST00000606307 135 ntBASIC1.13□□□□□ -2.23
APLFQ8IW19 7SK.8-201ENST00000612110 250 ntBASIC1.13□□□□□ -2.23
APLFQ8IW19 7SK.11-201ENST00000615477 250 ntBASIC1.13□□□□□ -2.23
APLFQ8IW19 7SK.13-201ENST00000622040 250 ntBASIC1.13□□□□□ -2.23
APLFQ8IW19 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
APLFQ8IW19 RNU6-309P-201ENST00000364573 106 ntBASIC1.12□□□□□ -2.23
APLFQ8IW19 RNY1P6-201ENST00000384193 109 ntBASIC1.12□□□□□ -2.23
APLFQ8IW19 Y_RNA.540-201ENST00000384638 111 ntBASIC1.12□□□□□ -2.23
APLFQ8IW19 Y_RNA.586-201ENST00000391146 98 ntBASIC1.12□□□□□ -2.23
APLFQ8IW19 RNU4-61P-201ENST00000411243 107 ntBASIC1.12□□□□□ -2.23
APLFQ8IW19 AL392103.1-201ENST00000447000 198 ntBASIC1.12□□□□□ -2.23
APLFQ8IW19 RNU7-73P-201ENST00000458743 63 ntBASIC1.12□□□□□ -2.23
APLFQ8IW19 snoU13.16-201ENST00000459350 104 ntBASIC1.12□□□□□ -2.23
APLFQ8IW19 Y_RNA.692-201ENST00000516627 105 ntBASIC1.12□□□□□ -2.23
APLFQ8IW19 U7.2-201ENST00000607576 63 ntBASIC1.12□□□□□ -2.23
APLFQ8IW19 AC011603.4-201ENST00000611325 277 ntBASIC1.12□□□□□ -2.23
APLFQ8IW19 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.12□□□□□ -2.23
APLFQ8IW19 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
APLFQ8IW19 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
APLFQ8IW19 SNORA25.3-201ENST00000363205 127 ntBASIC1.11□□□□□ -2.23
APLFQ8IW19 RNU4-16P-201ENST00000364737 141 ntBASIC1.11□□□□□ -2.23
APLFQ8IW19 Y_RNA.294-201ENST00000364916 102 ntBASIC1.11□□□□□ -2.23
APLFQ8IW19 MIR222-201ENST00000384992 110 ntBASIC1.11□□□□□ -2.23
APLFQ8IW19 RNU6-913P-201ENST00000390913 95 ntBASIC1.11□□□□□ -2.23
APLFQ8IW19 TMSB4XP3-201ENST00000445144 114 ntBASIC1.11□□□□□ -2.23
APLFQ8IW19 Y_RNA.651-201ENST00000459380 103 ntBASIC1.11□□□□□ -2.23
APLFQ8IW19 RNU7-45P-201ENST00000459460 63 ntBASIC1.11□□□□□ -2.23
APLFQ8IW19 AC019288.1-201ENST00000557918 224 ntBASIC1.11□□□□□ -2.23
APLFQ8IW19 CYP3A52P-201ENST00000563326 91 ntBASIC1.11□□□□□ -2.23
APLFQ8IW19 Y_RNA.757-201ENST00000578934 114 ntBASIC1.11□□□□□ -2.23
APLFQ8IW19 MIR548AO-201ENST00000579992 96 ntBASIC1.11□□□□□ -2.23
APLFQ8IW19 AC022709.1-201ENST00000615967 87 ntBASIC1.11□□□□□ -2.23
APLFQ8IW19 TUG1_4.1-201ENST00000619464 181 ntBASIC1.11□□□□□ -2.23
APLFQ8IW19 snoU13.25-201ENST00000458945 104 ntBASIC1.1□□□□□ -2.23
APLFQ8IW19 SNORA31.4-201ENST00000516049 129 ntBASIC1.1□□□□□ -2.23
APLFQ8IW19 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
APLFQ8IW19 RNU6-690P-201ENST00000365242 106 ntBASIC1.09□□□□□ -2.23
APLFQ8IW19 MIR520E-201ENST00000384867 87 ntBASIC1.09□□□□□ -2.23
APLFQ8IW19 RNU6-1190P-201ENST00000410811 104 ntBASIC1.09□□□□□ -2.23
APLFQ8IW19 HMGN1P33-201ENST00000432945 451 ntBASIC1.09□□□□□ -2.23
APLFQ8IW19 RNU6-1211P-201ENST00000459179 105 ntBASIC1.09□□□□□ -2.23
APLFQ8IW19 AC087343.1-201ENST00000477341 475 ntBASIC1.09□□□□□ -2.23
APLFQ8IW19 RNU6-240P-201ENST00000516098 97 ntBASIC1.09□□□□□ -2.23
APLFQ8IW19 MIR3121-201ENST00000579680 77 ntBASIC1.09□□□□□ -2.23
APLFQ8IW19 MIR3910-1-201ENST00000580936 111 ntBASIC1.09□□□□□ -2.23
APLFQ8IW19 HSPE1P19-201ENST00000603327 295 ntBASIC1.09□□□□□ -2.23
APLFQ8IW19 AL020996.3-201ENST00000606617 222 ntBASIC1.09□□□□□ -2.23
APLFQ8IW19 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
APLFQ8IW19 MIR103A2-201ENST00000362154 78 ntBASIC1.08□□□□□ -2.24
APLFQ8IW19 RNU6-349P-201ENST00000362402 107 ntBASIC1.08□□□□□ -2.24
APLFQ8IW19 SNORA1.1-201ENST00000364671 133 ntBASIC1.08□□□□□ -2.24
APLFQ8IW19 AL133373.1-201ENST00000497098 94 ntBASIC1.08□□□□□ -2.24
APLFQ8IW19 SNORA31.2-201ENST00000516019 134 ntBASIC1.08□□□□□ -2.24
APLFQ8IW19 RNU6-113P-201ENST00000516653 101 ntBASIC1.08□□□□□ -2.24
APLFQ8IW19 RNU6-971P-201ENST00000516920 106 ntBASIC1.08□□□□□ -2.24
APLFQ8IW19 AC021613.1-201ENST00000623880 111 ntBASIC1.08□□□□□ -2.24
APLFQ8IW19 Y_RNA.114-201ENST00000363265 113 ntBASIC1.07□□□□□ -2.24
APLFQ8IW19 SNORD114-27-201ENST00000363766 70 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms