Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 RNU6-602P-201ENST00000411155 105 ntBASIC1.12□□□□□ -2.23
ZC3HC1Q86WB0 RNU6-177P-201ENST00000411257 104 ntBASIC1.12□□□□□ -2.23
ZC3HC1Q86WB0 AC244023.1-201ENST00000426884 112 ntBASIC1.12□□□□□ -2.23
ZC3HC1Q86WB0 AC242498.1-201ENST00000604134 111 ntBASIC1.12□□□□□ -2.23
ZC3HC1Q86WB0 AC021613.1-201ENST00000623880 111 ntBASIC1.12□□□□□ -2.23
ZC3HC1Q86WB0 RNU6-746P-201ENST00000384112 109 ntBASIC1.11□□□□□ -2.23
ZC3HC1Q86WB0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
ZC3HC1Q86WB0 RNU7-40P-201ENST00000516397 64 ntBASIC1.11□□□□□ -2.23
ZC3HC1Q86WB0 MIR2115-201ENST00000516657 100 ntBASIC1.11□□□□□ -2.23
ZC3HC1Q86WB0 Y_RNA.703-201ENST00000516846 111 ntBASIC1.11□□□□□ -2.23
ZC3HC1Q86WB0 AL353997.5-201ENST00000618886 171 ntBASIC1.11□□□□□ -2.23
ZC3HC1Q86WB0 RNU4-16P-201ENST00000364737 141 ntBASIC1.1□□□□□ -2.23
ZC3HC1Q86WB0 Y_RNA.330-201ENST00000365230 109 ntBASIC1.1□□□□□ -2.23
ZC3HC1Q86WB0 Y_RNA.568-201ENST00000384742 113 ntBASIC1.1□□□□□ -2.23
ZC3HC1Q86WB0 MIR222-201ENST00000384992 110 ntBASIC1.1□□□□□ -2.23
ZC3HC1Q86WB0 RNU6-613P-201ENST00000410412 108 ntBASIC1.1□□□□□ -2.23
ZC3HC1Q86WB0 AP1B1P2-201ENST00000416196 106 ntBASIC1.1□□□□□ -2.23
ZC3HC1Q86WB0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.1□□□□□ -2.23
ZC3HC1Q86WB0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.1□□□□□ -2.23
ZC3HC1Q86WB0 MIR3121-201ENST00000579680 77 ntBASIC1.1□□□□□ -2.23
ZC3HC1Q86WB0 AC027335.2-201ENST00000624030 375 ntBASIC1.1□□□□□ -2.23
ZC3HC1Q86WB0 MIR6841-201ENST00000637129 72 ntBASIC1.1□□□□□ -2.23
ZC3HC1Q86WB0 AC010332.2-201ENST00000613083 1904 ntBASIC1.09□□□□□ -2.23
ZC3HC1Q86WB0 Y_RNA.343-201ENST00000365354 112 ntBASIC1.09□□□□□ -2.23
ZC3HC1Q86WB0 Y_RNA.430-201ENST00000384081 110 ntBASIC1.09□□□□□ -2.23
ZC3HC1Q86WB0 RNU6-939P-201ENST00000384634 107 ntBASIC1.09□□□□□ -2.23
ZC3HC1Q86WB0 SNORD38B-201ENST00000384690 67 ntBASIC1.09□□□□□ -2.23
ZC3HC1Q86WB0 SNORD12-201ENST00000391002 90 ntBASIC1.09□□□□□ -2.23
ZC3HC1Q86WB0 RNA5SP95-201ENST00000410319 137 ntBASIC1.09□□□□□ -2.23
ZC3HC1Q86WB0 RNA5SP261-201ENST00000410536 106 ntBASIC1.09□□□□□ -2.23
ZC3HC1Q86WB0 RPS3AP1-201ENST00000413190 320 ntBASIC1.09□□□□□ -2.23
ZC3HC1Q86WB0 BTF3P4-201ENST00000418852 495 ntBASIC1.09□□□□□ -2.23
ZC3HC1Q86WB0 AC002429.1-201ENST00000437672 148 ntBASIC1.09□□□□□ -2.23
ZC3HC1Q86WB0 RPS29P28-201ENST00000446439 141 ntBASIC1.09□□□□□ -2.23
ZC3HC1Q86WB0 AP001328.1-201ENST00000528550 176 ntBASIC1.09□□□□□ -2.23
ZC3HC1Q86WB0 MIR3152-201ENST00000579801 74 ntBASIC1.09□□□□□ -2.23
ZC3HC1Q86WB0 AC011603.4-201ENST00000611325 277 ntBASIC1.09□□□□□ -2.23
ZC3HC1Q86WB0 SNORD38B-202ENST00000625943 69 ntBASIC1.09□□□□□ -2.23
ZC3HC1Q86WB0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
ZC3HC1Q86WB0 AC008163.1-202ENST00000636004 2889 ntBASIC1.08□□□□□ -2.24
ZC3HC1Q86WB0 RNU6-187P-201ENST00000384139 106 ntBASIC1.08□□□□□ -2.24
ZC3HC1Q86WB0 MT-TN-201ENST00000387400 73 ntBASIC1.08□□□□□ -2.24
ZC3HC1Q86WB0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.08□□□□□ -2.24
ZC3HC1Q86WB0 RNU7-90P-201ENST00000459216 62 ntBASIC1.08□□□□□ -2.24
ZC3HC1Q86WB0 AC036111.3-201ENST00000526389 112 ntBASIC1.08□□□□□ -2.24
ZC3HC1Q86WB0 AL157834.3-201ENST00000615543 103 ntBASIC1.08□□□□□ -2.24
ZC3HC1Q86WB0 RNU6-690P-201ENST00000365242 106 ntBASIC1.07□□□□□ -2.24
ZC3HC1Q86WB0 RNU6-257P-201ENST00000410238 98 ntBASIC1.07□□□□□ -2.24
ZC3HC1Q86WB0 POLR2J4-204ENST00000418424 324 ntBASIC1.07□□□□□ -2.24
ZC3HC1Q86WB0 MTND4LP9-201ENST00000427694 174 ntBASIC1.07□□□□□ -2.24
ZC3HC1Q86WB0 SUMO1P3-201ENST00000439961 304 ntBASIC1.07□□□□□ -2.24
ZC3HC1Q86WB0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.07□□□□□ -2.24
ZC3HC1Q86WB0 RNU6-240P-201ENST00000516098 97 ntBASIC1.07□□□□□ -2.24
ZC3HC1Q86WB0 Y_RNA.692-201ENST00000516627 105 ntBASIC1.07□□□□□ -2.24
ZC3HC1Q86WB0 RNU6-113P-201ENST00000516653 101 ntBASIC1.07□□□□□ -2.24
ZC3HC1Q86WB0 RNU6-1258P-201ENST00000516911 111 ntBASIC1.07□□□□□ -2.24
ZC3HC1Q86WB0 RNA5SP404-201ENST00000517118 132 ntBASIC1.07□□□□□ -2.24
ZC3HC1Q86WB0 MIR4264-201ENST00000583520 66 ntBASIC1.07□□□□□ -2.24
ZC3HC1Q86WB0 AC108081.1-201ENST00000604358 221 ntBASIC1.07□□□□□ -2.24
ZC3HC1Q86WB0 SNORA22.1-201ENST00000362701 134 ntBASIC1.06□□□□□ -2.24
ZC3HC1Q86WB0 RNU1-124P-201ENST00000363861 145 ntBASIC1.06□□□□□ -2.24
ZC3HC1Q86WB0 RNA5SP99-201ENST00000364020 114 ntBASIC1.06□□□□□ -2.24
ZC3HC1Q86WB0 Y_RNA.294-201ENST00000364916 102 ntBASIC1.06□□□□□ -2.24
ZC3HC1Q86WB0 RNU6-580P-201ENST00000365159 107 ntBASIC1.06□□□□□ -2.24
ZC3HC1Q86WB0 SNORD12C-201ENST00000386307 89 ntBASIC1.06□□□□□ -2.24
ZC3HC1Q86WB0 RNU6-205P-201ENST00000390858 107 ntBASIC1.06□□□□□ -2.24
ZC3HC1Q86WB0 MIR548M-201ENST00000408260 86 ntBASIC1.06□□□□□ -2.24
ZC3HC1Q86WB0 RNA5SP144-201ENST00000410846 116 ntBASIC1.06□□□□□ -2.24
ZC3HC1Q86WB0 AC063976.4-201ENST00000421971 163 ntBASIC1.06□□□□□ -2.24
ZC3HC1Q86WB0 RNU5E-3P-201ENST00000515913 68 ntBASIC1.06□□□□□ -2.24
ZC3HC1Q86WB0 Y_RNA.757-201ENST00000578934 114 ntBASIC1.06□□□□□ -2.24
ZC3HC1Q86WB0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
ZC3HC1Q86WB0 MIR377-201ENST00000362145 69 ntBASIC1.05□□□□□ -2.24
ZC3HC1Q86WB0 Y_RNA.114-201ENST00000363265 113 ntBASIC1.05□□□□□ -2.24
ZC3HC1Q86WB0 Y_RNA.280-201ENST00000364765 112 ntBASIC1.05□□□□□ -2.24
ZC3HC1Q86WB0 SNORD50.2-201ENST00000365465 70 ntBASIC1.05□□□□□ -2.24
ZC3HC1Q86WB0 SNORA40-201ENST00000388090 126 ntBASIC1.05□□□□□ -2.24
ZC3HC1Q86WB0 MRPL35P3-201ENST00000421557 364 ntBASIC1.05□□□□□ -2.24
ZC3HC1Q86WB0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.05□□□□□ -2.24
ZC3HC1Q86WB0 RPS23P4-201ENST00000487908 423 ntBASIC1.05□□□□□ -2.24
ZC3HC1Q86WB0 AC133485.4-201ENST00000561835 220 ntBASIC1.05□□□□□ -2.24
ZC3HC1Q86WB0 AC023827.1-201ENST00000569247 97 ntBASIC1.05□□□□□ -2.24
ZC3HC1Q86WB0 AC138907.4-201ENST00000570107 226 ntBASIC1.05□□□□□ -2.24
ZC3HC1Q86WB0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.05□□□□□ -2.24
ZC3HC1Q86WB0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.05□□□□□ -2.24
ZC3HC1Q86WB0 AP000753.3-201ENST00000604083 169 ntBASIC1.05□□□□□ -2.24
ZC3HC1Q86WB0 SNORD114-21-201ENST00000606412 72 ntBASIC1.05□□□□□ -2.24
ZC3HC1Q86WB0 U7.2-201ENST00000607576 63 ntBASIC1.05□□□□□ -2.24
ZC3HC1Q86WB0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
ZC3HC1Q86WB0 Y_RNA.168-201ENST00000363740 102 ntBASIC1.04□□□□□ -2.24
ZC3HC1Q86WB0 Y_RNA.171-201ENST00000363760 102 ntBASIC1.04□□□□□ -2.24
ZC3HC1Q86WB0 SNORD113.3-201ENST00000364630 78 ntBASIC1.04□□□□□ -2.24
ZC3HC1Q86WB0 Y_RNA.354-201ENST00000365448 111 ntBASIC1.04□□□□□ -2.24
ZC3HC1Q86WB0 Y_RNA.366-201ENST00000365540 102 ntBASIC1.04□□□□□ -2.24
ZC3HC1Q86WB0 MIR19B1-201ENST00000384829 87 ntBASIC1.04□□□□□ -2.24
ZC3HC1Q86WB0 MIR613-201ENST00000385248 95 ntBASIC1.04□□□□□ -2.24
ZC3HC1Q86WB0 snoU13.2-201ENST00000459201 104 ntBASIC1.04□□□□□ -2.24
ZC3HC1Q86WB0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.04□□□□□ -2.24
ZC3HC1Q86WB0 MIR4305-201ENST00000583252 102 ntBASIC1.04□□□□□ -2.24
ZC3HC1Q86WB0 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms