Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 AC091932.4-201ENST00000623386 200 ntBASIC1.62□□□□□ -2.15
USP43Q70EL4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.62□□□□□ -2.15
USP43Q70EL4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
USP43Q70EL4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.61□□□□□ -2.15
USP43Q70EL4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
USP43Q70EL4 RNU4-36P-201ENST00000364294 144 ntBASIC1.61□□□□□ -2.15
USP43Q70EL4 RNY1P1-201ENST00000364372 112 ntBASIC1.61□□□□□ -2.15
USP43Q70EL4 SNORD115-35-201ENST00000365122 82 ntBASIC1.61□□□□□ -2.15
USP43Q70EL4 Y_RNA.360-201ENST00000365512 102 ntBASIC1.61□□□□□ -2.15
USP43Q70EL4 Y_RNA.494-201ENST00000384432 111 ntBASIC1.61□□□□□ -2.15
USP43Q70EL4 Y_RNA.531-201ENST00000384589 121 ntBASIC1.61□□□□□ -2.15
USP43Q70EL4 SNORA40.18-201ENST00000391200 128 ntBASIC1.61□□□□□ -2.15
USP43Q70EL4 MIR1283-2-201ENST00000408621 87 ntBASIC1.61□□□□□ -2.15
USP43Q70EL4 RNA5SP450-201ENST00000411206 102 ntBASIC1.61□□□□□ -2.15
USP43Q70EL4 BX510359.4-201ENST00000423750 193 ntBASIC1.61□□□□□ -2.15
USP43Q70EL4 MIR1270-201ENST00000459320 83 ntBASIC1.61□□□□□ -2.15
USP43Q70EL4 RPS23P4-201ENST00000487908 423 ntBASIC1.61□□□□□ -2.15
USP43Q70EL4 MIR4694-201ENST00000578534 80 ntBASIC1.61□□□□□ -2.15
USP43Q70EL4 MIR5588-201ENST00000581890 63 ntBASIC1.61□□□□□ -2.15
USP43Q70EL4 AL773524.1-201ENST00000614065 229 ntBASIC1.61□□□□□ -2.15
USP43Q70EL4 RNU6-661P-201ENST00000362409 107 ntBASIC1.6□□□□□ -2.15
USP43Q70EL4 RNU1-58P-201ENST00000362413 163 ntBASIC1.6□□□□□ -2.15
USP43Q70EL4 RNU6-23P-201ENST00000363283 107 ntBASIC1.6□□□□□ -2.15
USP43Q70EL4 Y_RNA.242-201ENST00000364473 110 ntBASIC1.6□□□□□ -2.15
USP43Q70EL4 Y_RNA.351-201ENST00000365436 96 ntBASIC1.6□□□□□ -2.15
USP43Q70EL4 RNU6-679P-201ENST00000391003 106 ntBASIC1.6□□□□□ -2.15
USP43Q70EL4 RNU6-402P-201ENST00000410678 103 ntBASIC1.6□□□□□ -2.15
USP43Q70EL4 RNA5SP144-201ENST00000410846 116 ntBASIC1.6□□□□□ -2.15
USP43Q70EL4 POLR2J4-204ENST00000418424 324 ntBASIC1.6□□□□□ -2.15
USP43Q70EL4 AC244636.1-201ENST00000421152 228 ntBASIC1.6□□□□□ -2.15
USP43Q70EL4 RNU7-171P-201ENST00000459581 62 ntBASIC1.6□□□□□ -2.15
USP43Q70EL4 RNU6-1258P-201ENST00000516911 111 ntBASIC1.6□□□□□ -2.15
USP43Q70EL4 Y_RNA.714-201ENST00000517065 90 ntBASIC1.6□□□□□ -2.15
USP43Q70EL4 AP003484.1-201ENST00000530974 250 ntBASIC1.6□□□□□ -2.15
USP43Q70EL4 AC005786.1-201ENST00000588553 154 ntBASIC1.6□□□□□ -2.15
USP43Q70EL4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.6□□□□□ -2.15
USP43Q70EL4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
USP43Q70EL4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
USP43Q70EL4 MIR337-201ENST00000362281 93 ntBASIC1.59□□□□□ -2.15
USP43Q70EL4 RNU6-60P-201ENST00000364792 103 ntBASIC1.59□□□□□ -2.15
USP43Q70EL4 MIR29C-201ENST00000385231 88 ntBASIC1.59□□□□□ -2.15
USP43Q70EL4 RNA5SP212-201ENST00000391223 107 ntBASIC1.59□□□□□ -2.15
USP43Q70EL4 RNU6-857P-201ENST00000515893 110 ntBASIC1.59□□□□□ -2.15
USP43Q70EL4 AC004812.1-201ENST00000540773 146 ntBASIC1.59□□□□□ -2.15
USP43Q70EL4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.59□□□□□ -2.15
USP43Q70EL4 IGLL4P-201ENST00000614590 133 ntBASIC1.59□□□□□ -2.15
USP43Q70EL4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
USP43Q70EL4 RNU4-16P-201ENST00000364737 141 ntBASIC1.58□□□□□ -2.16
USP43Q70EL4 RNU6-442P-201ENST00000383968 104 ntBASIC1.58□□□□□ -2.16
USP43Q70EL4 MIR597-201ENST00000384968 97 ntBASIC1.58□□□□□ -2.16
USP43Q70EL4 RNA5SP482-201ENST00000391269 118 ntBASIC1.58□□□□□ -2.16
USP43Q70EL4 AC245047.3-201ENST00000429428 127 ntBASIC1.58□□□□□ -2.16
USP43Q70EL4 AC087499.4-201ENST00000448505 178 ntBASIC1.58□□□□□ -2.16
USP43Q70EL4 AC139453.2-201ENST00000487255 133 ntBASIC1.58□□□□□ -2.16
USP43Q70EL4 SNORD45.4-201ENST00000516629 73 ntBASIC1.58□□□□□ -2.16
USP43Q70EL4 RNU7-28P-201ENST00000516759 62 ntBASIC1.58□□□□□ -2.16
USP43Q70EL4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.58□□□□□ -2.16
USP43Q70EL4 SNORD68-201ENST00000363214 84 ntBASIC1.57□□□□□ -2.16
USP43Q70EL4 Y_RNA.226-201ENST00000364337 114 ntBASIC1.57□□□□□ -2.16
USP43Q70EL4 RNU4-67P-201ENST00000364569 141 ntBASIC1.57□□□□□ -2.16
USP43Q70EL4 RNA5SP109-201ENST00000391010 116 ntBASIC1.57□□□□□ -2.16
USP43Q70EL4 RNU6-733P-201ENST00000410759 104 ntBASIC1.57□□□□□ -2.16
USP43Q70EL4 Y_RNA.620-201ENST00000411009 88 ntBASIC1.57□□□□□ -2.16
USP43Q70EL4 AC108667.1-201ENST00000428618 249 ntBASIC1.57□□□□□ -2.16
USP43Q70EL4 RNU2-11P-201ENST00000459191 187 ntBASIC1.57□□□□□ -2.16
USP43Q70EL4 RNU7-80P-201ENST00000459562 61 ntBASIC1.57□□□□□ -2.16
USP43Q70EL4 RPL23AP63-201ENST00000498752 471 ntBASIC1.57□□□□□ -2.16
USP43Q70EL4 AL513534.2-201ENST00000603836 250 ntBASIC1.57□□□□□ -2.16
USP43Q70EL4 snoU13.31-201ENST00000607291 104 ntBASIC1.57□□□□□ -2.16
USP43Q70EL4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.57□□□□□ -2.16
USP43Q70EL4 MIRLET7C-201ENST00000362160 84 ntBASIC1.56□□□□□ -2.16
USP43Q70EL4 MIR378A-201ENST00000362177 66 ntBASIC1.56□□□□□ -2.16
USP43Q70EL4 Y_RNA.10-201ENST00000362371 110 ntBASIC1.56□□□□□ -2.16
USP43Q70EL4 SNORD115-13-201ENST00000363358 82 ntBASIC1.56□□□□□ -2.16
USP43Q70EL4 SNORD115-16-201ENST00000363887 82 ntBASIC1.56□□□□□ -2.16
USP43Q70EL4 SNORD14E-201ENST00000364009 85 ntBASIC1.56□□□□□ -2.16
USP43Q70EL4 RNU6-1019P-201ENST00000364424 107 ntBASIC1.56□□□□□ -2.16
USP43Q70EL4 SNORD115-1-201ENST00000364961 82 ntBASIC1.56□□□□□ -2.16
USP43Q70EL4 Y_RNA.336-201ENST00000365307 109 ntBASIC1.56□□□□□ -2.16
USP43Q70EL4 Y_RNA.377-201ENST00000365644 108 ntBASIC1.56□□□□□ -2.16
USP43Q70EL4 RNU6-1296P-201ENST00000383879 107 ntBASIC1.56□□□□□ -2.16
USP43Q70EL4 Y_RNA.454-201ENST00000384224 113 ntBASIC1.56□□□□□ -2.16
USP43Q70EL4 RNU6-1201P-201ENST00000384227 107 ntBASIC1.56□□□□□ -2.16
USP43Q70EL4 Y_RNA.467-201ENST00000384297 102 ntBASIC1.56□□□□□ -2.16
USP43Q70EL4 AL627390.1-201ENST00000396055 340 ntBASIC1.56□□□□□ -2.16
USP43Q70EL4 RN7SKP200-201ENST00000410564 320 ntBASIC1.56□□□□□ -2.16
USP43Q70EL4 AC069257.2-201ENST00000441819 155 ntBASIC1.56□□□□□ -2.16
USP43Q70EL4 SNORA31.10-201ENST00000516482 106 ntBASIC1.56□□□□□ -2.16
USP43Q70EL4 MIR4781-201ENST00000585250 76 ntBASIC1.56□□□□□ -2.16
USP43Q70EL4 MIR8054-201ENST00000620877 86 ntBASIC1.56□□□□□ -2.16
USP43Q70EL4 SNORD115-2-201ENST00000362842 82 ntBASIC1.55□□□□□ -2.16
USP43Q70EL4 Y_RNA.95-201ENST00000363079 95 ntBASIC1.55□□□□□ -2.16
USP43Q70EL4 Y_RNA.171-201ENST00000363760 102 ntBASIC1.55□□□□□ -2.16
USP43Q70EL4 snoU2-30.1-201ENST00000365012 70 ntBASIC1.55□□□□□ -2.16
USP43Q70EL4 SNORD115-20-201ENST00000365099 82 ntBASIC1.55□□□□□ -2.16
USP43Q70EL4 RNU6-409P-201ENST00000384114 104 ntBASIC1.55□□□□□ -2.16
USP43Q70EL4 RNU6-242P-201ENST00000384359 107 ntBASIC1.55□□□□□ -2.16
USP43Q70EL4 RNU6-24P-201ENST00000384440 107 ntBASIC1.55□□□□□ -2.16
USP43Q70EL4 Y_RNA.507-201ENST00000384500 99 ntBASIC1.55□□□□□ -2.16
USP43Q70EL4 SNORA67.5-201ENST00000391036 107 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms