Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 Y_RNA.344-201ENST00000365381 112 ntBASIC1.48□□□□□ -2.17
ZNF549Q6P9A3 Y_RNA.362-201ENST00000365518 110 ntBASIC1.48□□□□□ -2.17
ZNF549Q6P9A3 RNU7-73P-201ENST00000458743 63 ntBASIC1.48□□□□□ -2.17
ZNF549Q6P9A3 AC023790.1-201ENST00000482174 347 ntBASIC1.48□□□□□ -2.17
ZNF549Q6P9A3 SNORA77B-201ENST00000578179 125 ntBASIC1.48□□□□□ -2.17
ZNF549Q6P9A3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.48□□□□□ -2.17
ZNF549Q6P9A3 AL020996.3-201ENST00000606617 222 ntBASIC1.48□□□□□ -2.17
ZNF549Q6P9A3 AC106754.2-201ENST00000623006 233 ntBASIC1.48□□□□□ -2.17
ZNF549Q6P9A3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
ZNF549Q6P9A3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 Y_RNA.537-201ENST00000384626 109 ntBASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 RNU6-554P-201ENST00000410466 106 ntBASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 JTBP1-201ENST00000441314 247 ntBASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 MIR1270-201ENST00000459320 83 ntBASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 RNU6-958P-201ENST00000516995 106 ntBASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 AC004812.1-201ENST00000540773 146 ntBASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 AL645939.4-201ENST00000604495 135 ntBASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 AC103810.8-201ENST00000607347 118 ntBASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 RNU6-94P-201ENST00000607728 107 ntBASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 AC243994.1-201ENST00000618627 109 ntBASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.47□□□□□ -2.17
ZNF549Q6P9A3 Y_RNA.140-201ENST00000363474 103 ntBASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 RNY4P6-201ENST00000363667 96 ntBASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 Y_RNA.171-201ENST00000363760 102 ntBASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 Y_RNA.213-201ENST00000364178 111 ntBASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 RNU6-60P-201ENST00000364792 103 ntBASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 Y_RNA.323-201ENST00000365157 109 ntBASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 MIR548D2-201ENST00000384955 97 ntBASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 MIR517C-201ENST00000385103 95 ntBASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 AC107297.1-201ENST00000459991 176 ntBASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 RPS23P4-201ENST00000487908 423 ntBASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 MIR8055-201ENST00000610739 97 ntBASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 AC087741.2-201ENST00000619415 172 ntBASIC1.46□□□□□ -2.18
ZNF549Q6P9A3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 MIR302B-201ENST00000362188 73 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 MIR450A1-201ENST00000362262 91 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 SNORD115-2-201ENST00000362842 82 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 SNORD115-20-201ENST00000365099 82 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 Y_RNA.430-201ENST00000384081 110 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 Y_RNA.531-201ENST00000384589 121 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 SNORD41-201ENST00000386967 70 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 SNORA67.5-201ENST00000391036 107 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 AL354695.1-201ENST00000427935 228 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 RNU7-67P-201ENST00000459003 62 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 RNU6-412P-201ENST00000516434 106 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 RNU7-53P-201ENST00000516705 60 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 SNORA44.1-201ENST00000517031 108 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 AC015688.6-201ENST00000577737 104 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 MIR4764-201ENST00000580680 88 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 AP000942.3-201ENST00000603702 160 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 MIR6717-201ENST00000622747 73 ntBASIC1.45□□□□□ -2.18
ZNF549Q6P9A3 RNU6-661P-201ENST00000362409 107 ntBASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 SNORA63.5-201ENST00000363548 123 ntBASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 RNU6-414P-201ENST00000363705 104 ntBASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 RNU1-42P-201ENST00000364033 160 ntBASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 RNU6-1014P-201ENST00000383940 103 ntBASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 SNORA70.7-201ENST00000384159 133 ntBASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 Y_RNA.470-201ENST00000384307 117 ntBASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 RNA5SP89-201ENST00000410300 108 ntBASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 HMGN1P33-201ENST00000432945 451 ntBASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 RNA5SP61-201ENST00000516453 100 ntBASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 RNU7-43P-201ENST00000516554 64 ntBASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 MIR3163-201ENST00000581592 73 ntBASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.44□□□□□ -2.18
ZNF549Q6P9A3 SNORA22.1-201ENST00000362701 134 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 Y_RNA.163-201ENST00000363702 113 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 U8.6-201ENST00000364939 135 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 RNU6-997P-201ENST00000384725 107 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 MIR513A1-201ENST00000385138 129 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 AL022718.1-201ENST00000412004 84 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 RPL39P34-201ENST00000477141 156 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 AC008834.1-201ENST00000511612 175 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 RNU7-41P-201ENST00000515917 61 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 SNORD53B-201ENST00000577887 78 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 MIR4303-201ENST00000581299 66 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 AC008133.2-201ENST00000624540 351 ntBASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
ZNF549Q6P9A3 SNORD115-19-201ENST00000363098 82 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 SNORD115-18-201ENST00000363293 82 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 SNORD115-17-201ENST00000364612 82 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 Y_RNA.328-201ENST00000365208 113 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 SNORA51.10-201ENST00000384418 136 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 SNORA67.6-201ENST00000391093 99 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 AC108667.1-201ENST00000428618 249 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 AL603825.1-201ENST00000438481 80 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 AL031737.1-201ENST00000450125 223 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 snoU13.16-201ENST00000459350 104 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 AC113410.1-201ENST00000505029 247 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 RNU6-168P-201ENST00000516189 101 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 RNU6-537P-201ENST00000517277 103 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 AC068339.1-201ENST00000526965 141 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 MIR3198-2-201ENST00000577868 80 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 Y_RNA.773-201ENST00000607168 90 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 AL589743.1-201ENST00000551932 2712 ntBASIC1.42□□□□□ -2.18
ZNF549Q6P9A3 MIR302D-201ENST00000362275 68 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 MIR520C-201ENST00000385005 87 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 194.9 ms