Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 USP9YP23-201ENST00000455085 407 ntBASIC-1.4□□□□□ -2.63
VPS13DQ5THJ4 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.4□□□□□ -2.63
VPS13DQ5THJ4 RNU6-192P-201ENST00000391253 100 ntBASIC-1.4□□□□□ -2.63
VPS13DQ5THJ4 MIR548O-201ENST00000408583 114 ntBASIC-1.4□□□□□ -2.63
VPS13DQ5THJ4 AC113618.1-201ENST00000416747 285 ntBASIC-1.4□□□□□ -2.63
VPS13DQ5THJ4 PISRT1.1-201ENST00000616930 107 ntBASIC-1.4□□□□□ -2.63
VPS13DQ5THJ4 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.4□□□□□ -2.63
VPS13DQ5THJ4 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.41□□□□□ -2.63
VPS13DQ5THJ4 RNU6-434P-201ENST00000384376 107 ntBASIC-1.41□□□□□ -2.63
VPS13DQ5THJ4 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.41□□□□□ -2.63
VPS13DQ5THJ4 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-1.41□□□□□ -2.63
VPS13DQ5THJ4 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.41□□□□□ -2.63
VPS13DQ5THJ4 RNU7-137P-201ENST00000516788 62 ntBASIC-1.41□□□□□ -2.63
VPS13DQ5THJ4 MIR3920-201ENST00000581751 86 ntBASIC-1.41□□□□□ -2.63
VPS13DQ5THJ4 SNORD113-7-201ENST00000363762 77 ntBASIC-1.41□□□□□ -2.64
VPS13DQ5THJ4 MTCO2P29-201ENST00000465212 189 ntBASIC-1.41□□□□□ -2.64
VPS13DQ5THJ4 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.41□□□□□ -2.64
VPS13DQ5THJ4 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.41□□□□□ -2.64
VPS13DQ5THJ4 AC007494.3-201ENST00000624660 743 ntBASIC-1.41□□□□□ -2.64
VPS13DQ5THJ4 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.41□□□□□ -2.64
VPS13DQ5THJ4 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.41□□□□□ -2.64
VPS13DQ5THJ4 MIR548E-201ENST00000408287 88 ntBASIC-1.41□□□□□ -2.64
VPS13DQ5THJ4 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.41□□□□□ -2.64
VPS13DQ5THJ4 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.41□□□□□ -2.64
VPS13DQ5THJ4 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.41□□□□□ -2.64
VPS13DQ5THJ4 RNU6-597P-201ENST00000365620 102 ntBASIC-1.42□□□□□ -2.64
VPS13DQ5THJ4 AC009961.2-201ENST00000435771 251 ntBASIC-1.42□□□□□ -2.64
VPS13DQ5THJ4 AL009048.1-201ENST00000450437 298 ntBASIC-1.42□□□□□ -2.64
VPS13DQ5THJ4 RNU7-45P-201ENST00000459460 63 ntBASIC-1.42□□□□□ -2.64
VPS13DQ5THJ4 AC144568.1-201ENST00000520139 137 ntBASIC-1.42□□□□□ -2.64
VPS13DQ5THJ4 AC141846.1-201ENST00000568348 142 ntBASIC-1.42□□□□□ -2.64
VPS13DQ5THJ4 uc_338.11-201ENST00000619132 160 ntBASIC-1.42□□□□□ -2.64
VPS13DQ5THJ4 MIR410-201ENST00000362222 80 ntBASIC-1.42□□□□□ -2.64
VPS13DQ5THJ4 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.42□□□□□ -2.64
VPS13DQ5THJ4 RNU6-336P-201ENST00000364891 107 ntBASIC-1.42□□□□□ -2.64
VPS13DQ5THJ4 MTND1P12-201ENST00000455231 147 ntBASIC-1.42□□□□□ -2.64
VPS13DQ5THJ4 RNU6-150P-201ENST00000516237 95 ntBASIC-1.42□□□□□ -2.64
VPS13DQ5THJ4 RNU6-762P-201ENST00000517107 102 ntBASIC-1.42□□□□□ -2.64
VPS13DQ5THJ4 CPDP1-201ENST00000579660 283 ntBASIC-1.42□□□□□ -2.64
VPS13DQ5THJ4 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.42□□□□□ -2.64
VPS13DQ5THJ4 MTCO3P42-201ENST00000509488 518 ntBASIC-1.42□□□□□ -2.64
VPS13DQ5THJ4 MTATP6P24-201ENST00000576835 677 ntBASIC-1.42□□□□□ -2.64
VPS13DQ5THJ4 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.43□□□□□ -2.64
VPS13DQ5THJ4 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.43□□□□□ -2.64
VPS13DQ5THJ4 MTCO3P23-201ENST00000561363 289 ntBASIC-1.43□□□□□ -2.64
VPS13DQ5THJ4 AC018638.8-201ENST00000588755 281 ntBASIC-1.43□□□□□ -2.64
VPS13DQ5THJ4 RNU6-393P-201ENST00000384475 107 ntBASIC-1.43□□□□□ -2.64
VPS13DQ5THJ4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.43□□□□□ -2.64
VPS13DQ5THJ4 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.43□□□□□ -2.64
VPS13DQ5THJ4 RNU6-102P-201ENST00000384485 104 ntBASIC-1.43□□□□□ -2.64
VPS13DQ5THJ4 AC002044.1-201ENST00000606707 158 ntBASIC-1.43□□□□□ -2.64
VPS13DQ5THJ4 RNU6-353P-201ENST00000364266 108 ntBASIC-1.43□□□□□ -2.64
VPS13DQ5THJ4 SNORD63B-201ENST00000411005 70 ntBASIC-1.43□□□□□ -2.64
VPS13DQ5THJ4 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.43□□□□□ -2.64
VPS13DQ5THJ4 RNU7-35P-201ENST00000517174 62 ntBASIC-1.43□□□□□ -2.64
VPS13DQ5THJ4 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.43□□□□□ -2.64
VPS13DQ5THJ4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-1.44□□□□□ -2.64
VPS13DQ5THJ4 AL080274.1-201ENST00000605565 220 ntBASIC-1.44□□□□□ -2.64
VPS13DQ5THJ4 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-1.44□□□□□ -2.64
VPS13DQ5THJ4 RNU6-560P-201ENST00000364007 108 ntBASIC-1.44□□□□□ -2.64
VPS13DQ5THJ4 RNU6-282P-201ENST00000365357 103 ntBASIC-1.44□□□□□ -2.64
VPS13DQ5THJ4 MIR558-201ENST00000384920 94 ntBASIC-1.44□□□□□ -2.64
VPS13DQ5THJ4 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.44□□□□□ -2.64
VPS13DQ5THJ4 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.44□□□□□ -2.64
VPS13DQ5THJ4 AC005828.6-201ENST00000606610 232 ntBASIC-1.44□□□□□ -2.64
VPS13DQ5THJ4 RNU6-79P-201ENST00000362511 107 ntBASIC-1.44□□□□□ -2.64
VPS13DQ5THJ4 RNU6-235P-201ENST00000362644 107 ntBASIC-1.44□□□□□ -2.64
VPS13DQ5THJ4 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.44□□□□□ -2.64
VPS13DQ5THJ4 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.45□□□□□ -2.64
VPS13DQ5THJ4 RNU7-48P-201ENST00000458875 63 ntBASIC-1.45□□□□□ -2.64
VPS13DQ5THJ4 RNU6-641P-201ENST00000384006 107 ntBASIC-1.45□□□□□ -2.64
VPS13DQ5THJ4 Z82188.1-201ENST00000436709 154 ntBASIC-1.45□□□□□ -2.64
VPS13DQ5THJ4 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.45□□□□□ -2.64
VPS13DQ5THJ4 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.45□□□□□ -2.64
VPS13DQ5THJ4 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.45□□□□□ -2.64
VPS13DQ5THJ4 SNORD115-7-201ENST00000365306 82 ntBASIC-1.45□□□□□ -2.64
VPS13DQ5THJ4 Y_RNA.576-201ENST00000384781 102 ntBASIC-1.45□□□□□ -2.64
VPS13DQ5THJ4 SNORA36B-201ENST00000410438 131 ntBASIC-1.45□□□□□ -2.64
VPS13DQ5THJ4 RNU7-140P-201ENST00000459546 60 ntBASIC-1.45□□□□□ -2.64
VPS13DQ5THJ4 RNU5B-1-201ENST00000363286 116 ntBASIC-1.45□□□□□ -2.64
VPS13DQ5THJ4 MIR206-201ENST00000384872 86 ntBASIC-1.45□□□□□ -2.64
VPS13DQ5THJ4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.45□□□□□ -2.64
VPS13DQ5THJ4 MIR3941-201ENST00000582572 103 ntBASIC-1.45□□□□□ -2.64
VPS13DQ5THJ4 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.46□□□□□ -2.64
VPS13DQ5THJ4 RNU6-767P-201ENST00000384132 107 ntBASIC-1.46□□□□□ -2.64
VPS13DQ5THJ4 RNU6-550P-201ENST00000391057 101 ntBASIC-1.46□□□□□ -2.64
VPS13DQ5THJ4 RNU6-519P-201ENST00000410590 108 ntBASIC-1.46□□□□□ -2.64
VPS13DQ5THJ4 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.46□□□□□ -2.64
VPS13DQ5THJ4 RNU6-524P-201ENST00000384270 107 ntBASIC-1.46□□□□□ -2.64
VPS13DQ5THJ4 RNU6-630P-201ENST00000391258 106 ntBASIC-1.46□□□□□ -2.64
VPS13DQ5THJ4 UBL5P4-201ENST00000562584 236 ntBASIC-1.46□□□□□ -2.64
VPS13DQ5THJ4 AC064836.2-201ENST00000609491 462 ntBASIC-1.46□□□□□ -2.64
VPS13DQ5THJ4 Y_RNA.381-201ENST00000365666 102 ntBASIC-1.46□□□□□ -2.64
VPS13DQ5THJ4 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC-1.46□□□□□ -2.64
VPS13DQ5THJ4 RNU7-195P-201ENST00000458793 62 ntBASIC-1.46□□□□□ -2.64
VPS13DQ5THJ4 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-1.46□□□□□ -2.64
VPS13DQ5THJ4 AC091179.3-201ENST00000474761 144 ntBASIC-1.46□□□□□ -2.64
VPS13DQ5THJ4 RNU6-170P-201ENST00000362832 104 ntBASIC-1.47□□□□□ -2.64
VPS13DQ5THJ4 RNU4-1-201ENST00000363925 141 ntBASIC-1.47□□□□□ -2.64
VPS13DQ5THJ4 RNU6-563P-201ENST00000364872 108 ntBASIC-1.47□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 219.1 ms