Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 RNU6-530P-201ENST00000391180 107 ntBASIC-1.03□□□□□ -2.57
UBR4Q5T4S7 RNU2-28P-201ENST00000410457 189 ntBASIC-1.03□□□□□ -2.57
UBR4Q5T4S7 RNU6-325P-201ENST00000411132 105 ntBASIC-1.03□□□□□ -2.57
UBR4Q5T4S7 UBE2D3P4-201ENST00000441973 436 ntBASIC-1.03□□□□□ -2.57
UBR4Q5T4S7 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.03□□□□□ -2.57
UBR4Q5T4S7 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.03□□□□□ -2.57
UBR4Q5T4S7 AC007012.1-201ENST00000567192 175 ntBASIC-1.03□□□□□ -2.57
UBR4Q5T4S7 AL078596.1-201ENST00000624856 447 ntBASIC-1.03□□□□□ -2.57
UBR4Q5T4S7 RNU4-85P-201ENST00000364675 123 ntBASIC-1.03□□□□□ -2.57
UBR4Q5T4S7 SUMO1P1-201ENST00000497904 306 ntBASIC-1.03□□□□□ -2.57
UBR4Q5T4S7 AC021451.1-201ENST00000523498 1129 ntBASIC-1.03□□□□□ -2.57
UBR4Q5T4S7 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.03□□□□□ -2.57
UBR4Q5T4S7 AC005972.2-201ENST00000604690 348 ntBASIC-1.03□□□□□ -2.57
UBR4Q5T4S7 AL133215.3-201ENST00000609801 448 ntBASIC-1.03□□□□□ -2.57
UBR4Q5T4S7 MIR521-2-201ENST00000384818 87 ntBASIC-1.03□□□□□ -2.57
UBR4Q5T4S7 MIR579-201ENST00000385221 98 ntBASIC-1.03□□□□□ -2.57
UBR4Q5T4S7 AC138393.2-201ENST00000414742 246 ntBASIC-1.03□□□□□ -2.57
UBR4Q5T4S7 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-1.03□□□□□ -2.57
UBR4Q5T4S7 RNU6-527P-201ENST00000363425 104 ntBASIC-1.03□□□□□ -2.58
UBR4Q5T4S7 AC231657.1-201ENST00000624313 397 ntBASIC-1.03□□□□□ -2.58
UBR4Q5T4S7 AC124864.2-201ENST00000624736 186 ntBASIC-1.03□□□□□ -2.58
UBR4Q5T4S7 Y_RNA.22-201ENST00000362492 102 ntBASIC-1.04□□□□□ -2.58
UBR4Q5T4S7 RNU6-961P-201ENST00000363893 105 ntBASIC-1.04□□□□□ -2.58
UBR4Q5T4S7 RNU6-309P-201ENST00000364573 106 ntBASIC-1.04□□□□□ -2.58
UBR4Q5T4S7 SNORD12C-201ENST00000386307 89 ntBASIC-1.04□□□□□ -2.58
UBR4Q5T4S7 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-1.04□□□□□ -2.58
UBR4Q5T4S7 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.04□□□□□ -2.58
UBR4Q5T4S7 RNU6-456P-201ENST00000384493 107 ntBASIC-1.04□□□□□ -2.58
UBR4Q5T4S7 U6.42-201ENST00000618440 107 ntBASIC-1.04□□□□□ -2.58
UBR4Q5T4S7 RNA5SP133-201ENST00000363368 119 ntBASIC-1.04□□□□□ -2.58
UBR4Q5T4S7 RNU6-531P-201ENST00000516694 104 ntBASIC-1.04□□□□□ -2.58
UBR4Q5T4S7 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.04□□□□□ -2.58
UBR4Q5T4S7 MIR548AC-201ENST00000585049 88 ntBASIC-1.04□□□□□ -2.58
UBR4Q5T4S7 RNU2-62P-201ENST00000410868 191 ntBASIC-1.04□□□□□ -2.58
UBR4Q5T4S7 AC093899.1-201ENST00000457984 376 ntBASIC-1.04□□□□□ -2.58
UBR4Q5T4S7 AL049829.1-201ENST00000465411 156 ntBASIC-1.04□□□□□ -2.58
UBR4Q5T4S7 AL133153.1-201ENST00000557756 303 ntBASIC-1.04□□□□□ -2.58
UBR4Q5T4S7 SNORA63.6-201ENST00000364921 119 ntBASIC-1.05□□□□□ -2.58
UBR4Q5T4S7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-1.05□□□□□ -2.58
UBR4Q5T4S7 RNU6-550P-201ENST00000391057 101 ntBASIC-1.05□□□□□ -2.58
UBR4Q5T4S7 MTCYBP4-201ENST00000401524 249 ntBASIC-1.05□□□□□ -2.58
UBR4Q5T4S7 SNORD115-39-201ENST00000363694 82 ntBASIC-1.05□□□□□ -2.58
UBR4Q5T4S7 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.05□□□□□ -2.58
UBR4Q5T4S7 RPL39P6-201ENST00000448289 150 ntBASIC-1.05□□□□□ -2.58
UBR4Q5T4S7 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.05□□□□□ -2.58
UBR4Q5T4S7 AC109479.2-201ENST00000517842 174 ntBASIC-1.05□□□□□ -2.58
UBR4Q5T4S7 MIR8055-201ENST00000610739 97 ntBASIC-1.05□□□□□ -2.58
UBR4Q5T4S7 SNORA72-201ENST00000384339 132 ntBASIC-1.05□□□□□ -2.58
UBR4Q5T4S7 SNORD116-23-201ENST00000384645 92 ntBASIC-1.05□□□□□ -2.58
UBR4Q5T4S7 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.05□□□□□ -2.58
UBR4Q5T4S7 AL137792.2-201ENST00000443484 235 ntBASIC-1.05□□□□□ -2.58
UBR4Q5T4S7 MIR1270-201ENST00000459320 83 ntBASIC-1.05□□□□□ -2.58
UBR4Q5T4S7 SNRPGP7-201ENST00000469016 106 ntBASIC-1.05□□□□□ -2.58
UBR4Q5T4S7 MTND2P32-201ENST00000521584 1038 ntBASIC-1.05□□□□□ -2.58
UBR4Q5T4S7 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.05□□□□□ -2.58
UBR4Q5T4S7 RNU4-58P-201ENST00000363192 141 ntBASIC-1.05□□□□□ -2.58
UBR4Q5T4S7 RNU6-832P-201ENST00000363319 107 ntBASIC-1.05□□□□□ -2.58
UBR4Q5T4S7 RNU6-361P-201ENST00000364454 107 ntBASIC-1.05□□□□□ -2.58
UBR4Q5T4S7 RNU6-522P-201ENST00000364497 107 ntBASIC-1.05□□□□□ -2.58
UBR4Q5T4S7 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.05□□□□□ -2.58
UBR4Q5T4S7 AC073415.1-201ENST00000449240 153 ntBASIC-1.05□□□□□ -2.58
UBR4Q5T4S7 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.06□□□□□ -2.58
UBR4Q5T4S7 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.06□□□□□ -2.58
UBR4Q5T4S7 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.06□□□□□ -2.58
UBR4Q5T4S7 MTND1P24-201ENST00000552175 861 ntBASIC-1.06□□□□□ -2.58
UBR4Q5T4S7 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.06□□□□□ -2.58
UBR4Q5T4S7 RNU6-422P-201ENST00000384632 107 ntBASIC-1.06□□□□□ -2.58
UBR4Q5T4S7 RNU6-246P-201ENST00000384702 107 ntBASIC-1.06□□□□□ -2.58
UBR4Q5T4S7 HIF1AP1-201ENST00000553642 175 ntBASIC-1.06□□□□□ -2.58
UBR4Q5T4S7 VN1R91P-201ENST00000594377 169 ntBASIC-1.06□□□□□ -2.58
UBR4Q5T4S7 AC087752.4-201ENST00000605911 462 ntBASIC-1.06□□□□□ -2.58
UBR4Q5T4S7 AC091931.1-201ENST00000623488 728 ntBASIC-1.06□□□□□ -2.58
UBR4Q5T4S7 RNU6-108P-201ENST00000365558 107 ntBASIC-1.06□□□□□ -2.58
UBR4Q5T4S7 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.06□□□□□ -2.58
UBR4Q5T4S7 MIR599-201ENST00000385069 95 ntBASIC-1.06□□□□□ -2.58
UBR4Q5T4S7 Y_RNA.578-201ENST00000390903 88 ntBASIC-1.06□□□□□ -2.58
UBR4Q5T4S7 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.06□□□□□ -2.58
UBR4Q5T4S7 TRAJ51-201ENST00000504127 63 ntBASIC-1.06□□□□□ -2.58
UBR4Q5T4S7 RNU7-53P-201ENST00000516705 60 ntBASIC-1.06□□□□□ -2.58
UBR4Q5T4S7 RNU7-151P-201ENST00000516930 53 ntBASIC-1.06□□□□□ -2.58
UBR4Q5T4S7 AC072039.2-201ENST00000608883 439 ntBASIC-1.06□□□□□ -2.58
UBR4Q5T4S7 RNU6-478P-201ENST00000363904 110 ntBASIC-1.07□□□□□ -2.58
UBR4Q5T4S7 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-1.07□□□□□ -2.58
UBR4Q5T4S7 AC133794.1-201ENST00000602731 914 ntBASIC-1.07□□□□□ -2.58
UBR4Q5T4S7 AC109347.2-201ENST00000610220 349 ntBASIC-1.07□□□□□ -2.58
UBR4Q5T4S7 RNU6-645P-201ENST00000364649 106 ntBASIC-1.07□□□□□ -2.58
UBR4Q5T4S7 SNORD60-201ENST00000383903 83 ntBASIC-1.07□□□□□ -2.58
UBR4Q5T4S7 MIR1254-1-201ENST00000408257 97 ntBASIC-1.07□□□□□ -2.58
UBR4Q5T4S7 AC097635.1-201ENST00000450678 155 ntBASIC-1.07□□□□□ -2.58
UBR4Q5T4S7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-1.07□□□□□ -2.58
UBR4Q5T4S7 MIR548AG1-201ENST00000579932 66 ntBASIC-1.07□□□□□ -2.58
UBR4Q5T4S7 AC008873.1-201ENST00000625051 138 ntBASIC-1.07□□□□□ -2.58
UBR4Q5T4S7 RNU6-543P-201ENST00000362576 108 ntBASIC-1.07□□□□□ -2.58
UBR4Q5T4S7 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.07□□□□□ -2.58
UBR4Q5T4S7 CYCSP46-201ENST00000423569 204 ntBASIC-1.07□□□□□ -2.58
UBR4Q5T4S7 MIR4637-201ENST00000582405 84 ntBASIC-1.07□□□□□ -2.58
UBR4Q5T4S7 AC027807.2-201ENST00000616099 408 ntBASIC-1.07□□□□□ -2.58
UBR4Q5T4S7 SCOCP1-201ENST00000554676 349 ntBASIC-1.07□□□□□ -2.58
UBR4Q5T4S7 SNORD50B-201ENST00000364995 70 ntBASIC-1.08□□□□□ -2.58
UBR4Q5T4S7 RNU6-481P-201ENST00000384194 107 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms