Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 RNU6-165P-201ENST00000517170 99 ntBASIC1.39□□□□□ -2.19
TTC39AQ5SRH9 AL512310.8-201ENST00000550183 120 ntBASIC1.39□□□□□ -2.19
TTC39AQ5SRH9 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.39□□□□□ -2.19
TTC39AQ5SRH9 AL357312.1-201ENST00000603879 298 ntBASIC1.39□□□□□ -2.19
TTC39AQ5SRH9 AC011603.4-201ENST00000611325 277 ntBASIC1.39□□□□□ -2.19
TTC39AQ5SRH9 AP001340.1-201ENST00000624405 217 ntBASIC1.39□□□□□ -2.19
TTC39AQ5SRH9 MIR4251-201ENST00000635819 61 ntBASIC1.39□□□□□ -2.19
TTC39AQ5SRH9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TTC39AQ5SRH9 MIR302B-201ENST00000362188 73 ntBASIC1.38□□□□□ -2.19
TTC39AQ5SRH9 SNORA25.3-201ENST00000363205 127 ntBASIC1.38□□□□□ -2.19
TTC39AQ5SRH9 SNORA24-201ENST00000384096 131 ntBASIC1.38□□□□□ -2.19
TTC39AQ5SRH9 RNU6-1067P-201ENST00000384752 107 ntBASIC1.38□□□□□ -2.19
TTC39AQ5SRH9 RNU6-1190P-201ENST00000410811 104 ntBASIC1.38□□□□□ -2.19
TTC39AQ5SRH9 RNU6-1211P-201ENST00000459179 105 ntBASIC1.38□□□□□ -2.19
TTC39AQ5SRH9 RNU6-971P-201ENST00000516920 106 ntBASIC1.38□□□□□ -2.19
TTC39AQ5SRH9 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.38□□□□□ -2.19
TTC39AQ5SRH9 RNU4-16P-201ENST00000364737 141 ntBASIC1.37□□□□□ -2.19
TTC39AQ5SRH9 SNORA70.7-201ENST00000384159 133 ntBASIC1.37□□□□□ -2.19
TTC39AQ5SRH9 RNU6-939P-201ENST00000384634 107 ntBASIC1.37□□□□□ -2.19
TTC39AQ5SRH9 MIR618-201ENST00000385287 98 ntBASIC1.37□□□□□ -2.19
TTC39AQ5SRH9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
TTC39AQ5SRH9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.37□□□□□ -2.19
TTC39AQ5SRH9 HMGN1P33-201ENST00000432945 451 ntBASIC1.37□□□□□ -2.19
TTC39AQ5SRH9 MTATP6P21-201ENST00000440681 189 ntBASIC1.37□□□□□ -2.19
TTC39AQ5SRH9 TMSB4XP3-201ENST00000445144 114 ntBASIC1.37□□□□□ -2.19
TTC39AQ5SRH9 Y_RNA.692-201ENST00000516627 105 ntBASIC1.37□□□□□ -2.19
TTC39AQ5SRH9 MIR3121-201ENST00000579680 77 ntBASIC1.37□□□□□ -2.19
TTC39AQ5SRH9 MIR548AO-201ENST00000579992 96 ntBASIC1.37□□□□□ -2.19
TTC39AQ5SRH9 U7.2-201ENST00000607576 63 ntBASIC1.37□□□□□ -2.19
TTC39AQ5SRH9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.37□□□□□ -2.19
TTC39AQ5SRH9 Y_RNA.454-201ENST00000384224 113 ntBASIC1.36□□□□□ -2.19
TTC39AQ5SRH9 CYP3A52P-201ENST00000563326 91 ntBASIC1.36□□□□□ -2.19
TTC39AQ5SRH9 MIR4452-201ENST00000583004 71 ntBASIC1.36□□□□□ -2.19
TTC39AQ5SRH9 MIR4295-201ENST00000585286 85 ntBASIC1.36□□□□□ -2.19
TTC39AQ5SRH9 AC108081.1-201ENST00000604358 221 ntBASIC1.36□□□□□ -2.19
TTC39AQ5SRH9 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
TTC39AQ5SRH9 MIR7111-201ENST00000619751 72 ntBASIC1.36□□□□□ -2.19
TTC39AQ5SRH9 RNU6-349P-201ENST00000362402 107 ntBASIC1.35□□□□□ -2.19
TTC39AQ5SRH9 Y_RNA.114-201ENST00000363265 113 ntBASIC1.35□□□□□ -2.19
TTC39AQ5SRH9 Y_RNA.118-201ENST00000363300 101 ntBASIC1.35□□□□□ -2.19
TTC39AQ5SRH9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.35□□□□□ -2.19
TTC39AQ5SRH9 AL591704.2-201ENST00000421658 181 ntBASIC1.35□□□□□ -2.19
TTC39AQ5SRH9 RPL39P39-201ENST00000455840 151 ntBASIC1.35□□□□□ -2.19
TTC39AQ5SRH9 RNU6-240P-201ENST00000516098 97 ntBASIC1.35□□□□□ -2.19
TTC39AQ5SRH9 RNU7-53P-201ENST00000516705 60 ntBASIC1.35□□□□□ -2.19
TTC39AQ5SRH9 RN7SKP88-201ENST00000516847 250 ntBASIC1.35□□□□□ -2.19
TTC39AQ5SRH9 7SK.8-201ENST00000612110 250 ntBASIC1.35□□□□□ -2.19
TTC39AQ5SRH9 7SK.11-201ENST00000615477 250 ntBASIC1.35□□□□□ -2.19
TTC39AQ5SRH9 TUG1_4.1-201ENST00000619464 181 ntBASIC1.35□□□□□ -2.19
TTC39AQ5SRH9 7SK.13-201ENST00000622040 250 ntBASIC1.35□□□□□ -2.19
TTC39AQ5SRH9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
TTC39AQ5SRH9 RNU6-235P-201ENST00000362644 107 ntBASIC1.34□□□□□ -2.19
TTC39AQ5SRH9 RNU6-690P-201ENST00000365242 106 ntBASIC1.34□□□□□ -2.19
TTC39AQ5SRH9 RNY1P6-201ENST00000384193 109 ntBASIC1.34□□□□□ -2.19
TTC39AQ5SRH9 RNU7-73P-201ENST00000458743 63 ntBASIC1.34□□□□□ -2.19
TTC39AQ5SRH9 snoU13.16-201ENST00000459350 104 ntBASIC1.34□□□□□ -2.19
TTC39AQ5SRH9 snoU13.18-201ENST00000459483 104 ntBASIC1.34□□□□□ -2.19
TTC39AQ5SRH9 AC087343.1-201ENST00000477341 475 ntBASIC1.34□□□□□ -2.19
TTC39AQ5SRH9 RN7SKP179-201ENST00000516126 217 ntBASIC1.34□□□□□ -2.19
TTC39AQ5SRH9 AC090844.1-201ENST00000422019 156 ntBASIC1.33□□□□□ -2.2
TTC39AQ5SRH9 RNU6-1234P-201ENST00000516877 103 ntBASIC1.33□□□□□ -2.2
TTC39AQ5SRH9 Y_RNA.757-201ENST00000578934 114 ntBASIC1.33□□□□□ -2.2
TTC39AQ5SRH9 AL020996.3-201ENST00000606617 222 ntBASIC1.33□□□□□ -2.2
TTC39AQ5SRH9 RNA5SP48-201ENST00000363969 126 ntBASIC1.32□□□□□ -2.2
TTC39AQ5SRH9 SNORA25.8-201ENST00000364831 128 ntBASIC1.32□□□□□ -2.2
TTC39AQ5SRH9 Y_RNA.366-201ENST00000365540 102 ntBASIC1.32□□□□□ -2.2
TTC39AQ5SRH9 MIR1302-7-201ENST00000408841 72 ntBASIC1.32□□□□□ -2.2
TTC39AQ5SRH9 AC048334.1-201ENST00000477975 159 ntBASIC1.32□□□□□ -2.2
TTC39AQ5SRH9 AC021613.1-201ENST00000623880 111 ntBASIC1.32□□□□□ -2.2
TTC39AQ5SRH9 AC132825.6-201ENST00000638861 357 ntBASIC1.32□□□□□ -2.2
TTC39AQ5SRH9 AL157777.2-201ENST00000258070 137 ntBASIC1.31□□□□□ -2.2
TTC39AQ5SRH9 SNORD114-27-201ENST00000363766 70 ntBASIC1.31□□□□□ -2.2
TTC39AQ5SRH9 Y_RNA.218-201ENST00000364218 104 ntBASIC1.31□□□□□ -2.2
TTC39AQ5SRH9 Y_RNA.525-201ENST00000384570 113 ntBASIC1.31□□□□□ -2.2
TTC39AQ5SRH9 SNORA26.6-201ENST00000391256 115 ntBASIC1.31□□□□□ -2.2
TTC39AQ5SRH9 MIR1285-1-201ENST00000408593 84 ntBASIC1.31□□□□□ -2.2
TTC39AQ5SRH9 AL158147.1-201ENST00000443970 75 ntBASIC1.31□□□□□ -2.2
TTC39AQ5SRH9 IGKV1-22-201ENST00000524313 326 ntBASIC1.31□□□□□ -2.2
TTC39AQ5SRH9 AC019288.1-201ENST00000557918 224 ntBASIC1.31□□□□□ -2.2
TTC39AQ5SRH9 MIR8055-201ENST00000610739 97 ntBASIC1.31□□□□□ -2.2
TTC39AQ5SRH9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.31□□□□□ -2.2
TTC39AQ5SRH9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
TTC39AQ5SRH9 Y_RNA.280-201ENST00000364765 112 ntBASIC1.3□□□□□ -2.2
TTC39AQ5SRH9 RNU6-81P-201ENST00000365608 104 ntBASIC1.3□□□□□ -2.2
TTC39AQ5SRH9 MIR539-201ENST00000365690 78 ntBASIC1.3□□□□□ -2.2
TTC39AQ5SRH9 RNU6-959P-201ENST00000384671 107 ntBASIC1.3□□□□□ -2.2
TTC39AQ5SRH9 MIR1185-1-201ENST00000408598 86 ntBASIC1.3□□□□□ -2.2
TTC39AQ5SRH9 AL133373.1-201ENST00000497098 94 ntBASIC1.3□□□□□ -2.2
TTC39AQ5SRH9 SNORA31.2-201ENST00000516019 134 ntBASIC1.3□□□□□ -2.2
TTC39AQ5SRH9 AC133485.4-201ENST00000561835 220 ntBASIC1.3□□□□□ -2.2
TTC39AQ5SRH9 AC138907.4-201ENST00000570107 226 ntBASIC1.3□□□□□ -2.2
TTC39AQ5SRH9 SNORA4-201ENST00000584302 138 ntBASIC1.3□□□□□ -2.2
TTC39AQ5SRH9 PRELID3BP2-201ENST00000605362 201 ntBASIC1.3□□□□□ -2.2
TTC39AQ5SRH9 MIR6717-201ENST00000622747 73 ntBASIC1.3□□□□□ -2.2
TTC39AQ5SRH9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.29□□□□□ -2.2
TTC39AQ5SRH9 SNORA1.1-201ENST00000364671 133 ntBASIC1.29□□□□□ -2.2
TTC39AQ5SRH9 RNU7-107P-201ENST00000459121 61 ntBASIC1.29□□□□□ -2.2
TTC39AQ5SRH9 RNU6-406P-201ENST00000516470 107 ntBASIC1.29□□□□□ -2.2
TTC39AQ5SRH9 RNU6-789P-201ENST00000517105 102 ntBASIC1.29□□□□□ -2.2
TTC39AQ5SRH9 AC021443.1-201ENST00000604478 211 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms