Protein–RNA interactions for Protein: Q53GS9

USP39, U4/U6.U5 tri-snRNP-associated protein 2, humanhuman

Known RBP Predictions only

Length 565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP39Q53GS9 RNU6-832P-201ENST00000363319 107 ntBASIC2.03□□□□□ -2.08
USP39Q53GS9 RNU4-67P-201ENST00000364569 141 ntBASIC2.03□□□□□ -2.08
USP39Q53GS9 SNORD115-20-201ENST00000365099 82 ntBASIC2.03□□□□□ -2.08
USP39Q53GS9 MIR518A2-201ENST00000384966 87 ntBASIC2.03□□□□□ -2.08
USP39Q53GS9 MIR597-201ENST00000384968 97 ntBASIC2.03□□□□□ -2.08
USP39Q53GS9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
USP39Q53GS9 RNU6-1319P-201ENST00000390855 104 ntBASIC2.03□□□□□ -2.08
USP39Q53GS9 RNU6-747P-201ENST00000390928 104 ntBASIC2.03□□□□□ -2.08
USP39Q53GS9 RNU6-241P-201ENST00000391148 104 ntBASIC2.03□□□□□ -2.08
USP39Q53GS9 SNORA26.6-201ENST00000391256 115 ntBASIC2.03□□□□□ -2.08
USP39Q53GS9 MIR1283-2-201ENST00000408621 87 ntBASIC2.03□□□□□ -2.08
USP39Q53GS9 RNU6-177P-201ENST00000411257 104 ntBASIC2.03□□□□□ -2.08
USP39Q53GS9 AC096949.1-201ENST00000412047 152 ntBASIC2.03□□□□□ -2.08
USP39Q53GS9 AL445685.2-201ENST00000422551 342 ntBASIC2.03□□□□□ -2.08
USP39Q53GS9 AC079804.2-201ENST00000490376 200 ntBASIC2.03□□□□□ -2.08
USP39Q53GS9 RNU2-13P-201ENST00000515909 113 ntBASIC2.03□□□□□ -2.08
USP39Q53GS9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.03□□□□□ -2.08
USP39Q53GS9 MIR548Z-201ENST00000584743 97 ntBASIC2.03□□□□□ -2.08
USP39Q53GS9 MIR6841-201ENST00000637129 72 ntBASIC2.03□□□□□ -2.08
USP39Q53GS9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
USP39Q53GS9 RNA5SP276-201ENST00000362580 94 ntBASIC2.02□□□□□ -2.09
USP39Q53GS9 Y_RNA.470-201ENST00000384307 117 ntBASIC2.02□□□□□ -2.09
USP39Q53GS9 Y_RNA.507-201ENST00000384500 99 ntBASIC2.02□□□□□ -2.09
USP39Q53GS9 MIR676-201ENST00000390702 67 ntBASIC2.02□□□□□ -2.09
USP39Q53GS9 RNU6-679P-201ENST00000391003 106 ntBASIC2.02□□□□□ -2.09
USP39Q53GS9 RNU4-69P-201ENST00000410677 143 ntBASIC2.02□□□□□ -2.09
USP39Q53GS9 RNU6-733P-201ENST00000410759 104 ntBASIC2.02□□□□□ -2.09
USP39Q53GS9 AC025033.1-201ENST00000463883 194 ntBASIC2.02□□□□□ -2.09
USP39Q53GS9 RNU6-795P-201ENST00000516323 103 ntBASIC2.02□□□□□ -2.09
USP39Q53GS9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.02□□□□□ -2.09
USP39Q53GS9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
USP39Q53GS9 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.01□□□□□ -2.09
USP39Q53GS9 RNU6-170P-201ENST00000362832 104 ntBASIC2.01□□□□□ -2.09
USP39Q53GS9 Y_RNA.155-201ENST00000363632 101 ntBASIC2.01□□□□□ -2.09
USP39Q53GS9 RNA5SP160-201ENST00000364866 120 ntBASIC2.01□□□□□ -2.09
USP39Q53GS9 RNU6-1134P-201ENST00000365156 101 ntBASIC2.01□□□□□ -2.09
USP39Q53GS9 SNORA24-201ENST00000384096 131 ntBASIC2.01□□□□□ -2.09
USP39Q53GS9 RNU6-409P-201ENST00000384114 104 ntBASIC2.01□□□□□ -2.09
USP39Q53GS9 RNU6-1031P-201ENST00000384773 107 ntBASIC2.01□□□□□ -2.09
USP39Q53GS9 MIR516B2-201ENST00000385190 85 ntBASIC2.01□□□□□ -2.09
USP39Q53GS9 RNU6-644P-201ENST00000391155 98 ntBASIC2.01□□□□□ -2.09
USP39Q53GS9 AL034345.1-201ENST00000407768 123 ntBASIC2.01□□□□□ -2.09
USP39Q53GS9 HMGN2P19-201ENST00000425149 265 ntBASIC2.01□□□□□ -2.09
USP39Q53GS9 AC004941.2-201ENST00000427009 228 ntBASIC2.01□□□□□ -2.09
USP39Q53GS9 RNU7-61P-201ENST00000515897 61 ntBASIC2.01□□□□□ -2.09
USP39Q53GS9 RNU6-1053P-201ENST00000515930 101 ntBASIC2.01□□□□□ -2.09
USP39Q53GS9 RNU7-12P-201ENST00000516030 62 ntBASIC2.01□□□□□ -2.09
USP39Q53GS9 AC091304.10-201ENST00000641554 121 ntBASIC2.01□□□□□ -2.09
USP39Q53GS9 Y_RNA.17-201ENST00000362433 111 ntBASIC2□□□□□ -2.09
USP39Q53GS9 Y_RNA.299-201ENST00000364973 94 ntBASIC2□□□□□ -2.09
USP39Q53GS9 RNA5SP338-201ENST00000410495 85 ntBASIC2□□□□□ -2.09
USP39Q53GS9 RNU6-1190P-201ENST00000410811 104 ntBASIC2□□□□□ -2.09
USP39Q53GS9 RPL23AP6-201ENST00000446637 472 ntBASIC2□□□□□ -2.09
USP39Q53GS9 AC093850.1-201ENST00000454121 251 ntBASIC2□□□□□ -2.09
USP39Q53GS9 RNU7-113P-201ENST00000459273 62 ntBASIC2□□□□□ -2.09
USP39Q53GS9 RNVU1-2-201ENST00000516326 135 ntBASIC2□□□□□ -2.09
USP39Q53GS9 RNU6-638P-201ENST00000516582 104 ntBASIC2□□□□□ -2.09
USP39Q53GS9 RNU1-40P-201ENST00000516816 164 ntBASIC2□□□□□ -2.09
USP39Q53GS9 RNU1-97P-201ENST00000516872 164 ntBASIC2□□□□□ -2.09
USP39Q53GS9 MIR4498-201ENST00000577599 66 ntBASIC2□□□□□ -2.09
USP39Q53GS9 MIR548AE2-201ENST00000583456 67 ntBASIC2□□□□□ -2.09
USP39Q53GS9 MIR4777-201ENST00000583710 86 ntBASIC2□□□□□ -2.09
USP39Q53GS9 AL773524.1-201ENST00000614065 229 ntBASIC2□□□□□ -2.09
USP39Q53GS9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
USP39Q53GS9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
USP39Q53GS9 Y_RNA.10-201ENST00000362371 110 ntBASIC1.99□□□□□ -2.09
USP39Q53GS9 Y_RNA.370-201ENST00000365589 108 ntBASIC1.99□□□□□ -2.09
USP39Q53GS9 RNU6-616P-201ENST00000384353 107 ntBASIC1.99□□□□□ -2.09
USP39Q53GS9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
USP39Q53GS9 RNU11-3P-201ENST00000391111 133 ntBASIC1.99□□□□□ -2.09
USP39Q53GS9 AC069257.2-201ENST00000441819 155 ntBASIC1.99□□□□□ -2.09
USP39Q53GS9 RNA5SP437-201ENST00000517249 129 ntBASIC1.99□□□□□ -2.09
USP39Q53GS9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.99□□□□□ -2.09
USP39Q53GS9 FAM71BP1-201ENST00000604431 523 ntBASIC1.99□□□□□ -2.09
USP39Q53GS9 U7.3-201ENST00000616123 62 ntBASIC1.99□□□□□ -2.09
USP39Q53GS9 SNORA22.1-201ENST00000362701 134 ntBASIC1.98□□□□□ -2.09
USP39Q53GS9 RNA5SP138-201ENST00000365098 114 ntBASIC1.98□□□□□ -2.09
USP39Q53GS9 MIR526A1-201ENST00000384897 85 ntBASIC1.98□□□□□ -2.09
USP39Q53GS9 RNU6-913P-201ENST00000390913 95 ntBASIC1.98□□□□□ -2.09
USP39Q53GS9 SNORD28B-201ENST00000390993 75 ntBASIC1.98□□□□□ -2.09
USP39Q53GS9 RNU2-40P-201ENST00000410833 196 ntBASIC1.98□□□□□ -2.09
USP39Q53GS9 AC244636.1-201ENST00000421152 228 ntBASIC1.98□□□□□ -2.09
USP39Q53GS9 RPL23AP63-201ENST00000498752 471 ntBASIC1.98□□□□□ -2.09
USP39Q53GS9 RNU6-162P-201ENST00000516228 103 ntBASIC1.98□□□□□ -2.09
USP39Q53GS9 Y_RNA.685-201ENST00000516532 108 ntBASIC1.98□□□□□ -2.09
USP39Q53GS9 RNU6-958P-201ENST00000516995 106 ntBASIC1.98□□□□□ -2.09
USP39Q53GS9 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.98□□□□□ -2.09
USP39Q53GS9 MIR548AR-201ENST00000582191 57 ntBASIC1.98□□□□□ -2.09
USP39Q53GS9 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.98□□□□□ -2.09
USP39Q53GS9 SNORA1.2-201ENST00000365189 134 ntBASIC1.97□□□□□ -2.09
USP39Q53GS9 Y_RNA.377-201ENST00000365644 108 ntBASIC1.97□□□□□ -2.09
USP39Q53GS9 Y_RNA.430-201ENST00000384081 110 ntBASIC1.97□□□□□ -2.09
USP39Q53GS9 RNU6-296P-201ENST00000384608 107 ntBASIC1.97□□□□□ -2.09
USP39Q53GS9 RNU6-950P-201ENST00000384651 107 ntBASIC1.97□□□□□ -2.09
USP39Q53GS9 MIR452-201ENST00000385020 85 ntBASIC1.97□□□□□ -2.09
USP39Q53GS9 SNORA7.5-201ENST00000410672 110 ntBASIC1.97□□□□□ -2.09
USP39Q53GS9 AC108667.1-201ENST00000428618 249 ntBASIC1.97□□□□□ -2.09
USP39Q53GS9 RPS29P29-201ENST00000456396 171 ntBASIC1.97□□□□□ -2.09
USP39Q53GS9 AC099513.1-201ENST00000490423 301 ntBASIC1.97□□□□□ -2.09
USP39Q53GS9 RNA5SP33-201ENST00000516687 98 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 205 ms