Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 SNORD13-201ENST00000459299 104 ntBASIC1.6□□□□□ -2.15
ATP13A4Q4VNC1 AC021443.1-201ENST00000604478 211 ntBASIC1.6□□□□□ -2.15
ATP13A4Q4VNC1 MIR6841-201ENST00000637129 72 ntBASIC1.6□□□□□ -2.15
ATP13A4Q4VNC1 RNU6-235P-201ENST00000362644 107 ntBASIC1.59□□□□□ -2.15
ATP13A4Q4VNC1 SNORD26-201ENST00000384147 75 ntBASIC1.59□□□□□ -2.15
ATP13A4Q4VNC1 RNU6-959P-201ENST00000384671 107 ntBASIC1.59□□□□□ -2.15
ATP13A4Q4VNC1 SNORA67.5-201ENST00000391036 107 ntBASIC1.59□□□□□ -2.15
ATP13A4Q4VNC1 MIR1304-201ENST00000408243 91 ntBASIC1.59□□□□□ -2.15
ATP13A4Q4VNC1 RNA5SP458-201ENST00000516188 119 ntBASIC1.59□□□□□ -2.15
ATP13A4Q4VNC1 RNU6-406P-201ENST00000516470 107 ntBASIC1.59□□□□□ -2.15
ATP13A4Q4VNC1 MIR2115-201ENST00000516657 100 ntBASIC1.59□□□□□ -2.15
ATP13A4Q4VNC1 MIR4305-201ENST00000583252 102 ntBASIC1.59□□□□□ -2.15
ATP13A4Q4VNC1 AL137067.1-201ENST00000615933 120 ntBASIC1.59□□□□□ -2.15
ATP13A4Q4VNC1 SNORA22.1-201ENST00000362701 134 ntBASIC1.58□□□□□ -2.16
ATP13A4Q4VNC1 Y_RNA.354-201ENST00000365448 111 ntBASIC1.58□□□□□ -2.16
ATP13A4Q4VNC1 RNU6-80P-201ENST00000384195 107 ntBASIC1.58□□□□□ -2.16
ATP13A4Q4VNC1 SNORD38B-201ENST00000384690 67 ntBASIC1.58□□□□□ -2.16
ATP13A4Q4VNC1 MIR320A-201ENST00000385302 82 ntBASIC1.58□□□□□ -2.16
ATP13A4Q4VNC1 SNORA17.3-201ENST00000391159 129 ntBASIC1.58□□□□□ -2.16
ATP13A4Q4VNC1 RNA5SP144-201ENST00000410846 116 ntBASIC1.58□□□□□ -2.16
ATP13A4Q4VNC1 RNU6-602P-201ENST00000411155 105 ntBASIC1.58□□□□□ -2.16
ATP13A4Q4VNC1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.58□□□□□ -2.16
ATP13A4Q4VNC1 SNORD38B-202ENST00000625943 69 ntBASIC1.58□□□□□ -2.16
ATP13A4Q4VNC1 AL022718.1-201ENST00000412004 84 ntBASIC1.57□□□□□ -2.16
ATP13A4Q4VNC1 POLR2J4-204ENST00000418424 324 ntBASIC1.57□□□□□ -2.16
ATP13A4Q4VNC1 RN7SKP19-201ENST00000516016 252 ntBASIC1.57□□□□□ -2.16
ATP13A4Q4VNC1 BX248123.2-201ENST00000606318 124 ntBASIC1.57□□□□□ -2.16
ATP13A4Q4VNC1 MIR6516-201ENST00000630554 81 ntBASIC1.57□□□□□ -2.16
ATP13A4Q4VNC1 Y_RNA.218-201ENST00000364218 104 ntBASIC1.56□□□□□ -2.16
ATP13A4Q4VNC1 Y_RNA.363-201ENST00000365529 113 ntBASIC1.56□□□□□ -2.16
ATP13A4Q4VNC1 RNU6-910P-201ENST00000390844 107 ntBASIC1.56□□□□□ -2.16
ATP13A4Q4VNC1 Y_RNA.617-201ENST00000410920 90 ntBASIC1.56□□□□□ -2.16
ATP13A4Q4VNC1 RNU7-164P-201ENST00000459221 62 ntBASIC1.56□□□□□ -2.16
ATP13A4Q4VNC1 AC023790.1-201ENST00000482174 347 ntBASIC1.56□□□□□ -2.16
ATP13A4Q4VNC1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.56□□□□□ -2.16
ATP13A4Q4VNC1 AL645939.4-201ENST00000604495 135 ntBASIC1.56□□□□□ -2.16
ATP13A4Q4VNC1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.56□□□□□ -2.16
ATP13A4Q4VNC1 SEPT14P17-201ENST00000617978 177 ntBASIC1.56□□□□□ -2.16
ATP13A4Q4VNC1 Y_RNA.71-201ENST00000362892 104 ntBASIC1.55□□□□□ -2.16
ATP13A4Q4VNC1 AC108667.1-201ENST00000428618 249 ntBASIC1.55□□□□□ -2.16
ATP13A4Q4VNC1 RNU2-35P-201ENST00000516446 142 ntBASIC1.55□□□□□ -2.16
ATP13A4Q4VNC1 RNU6-1234P-201ENST00000516877 103 ntBASIC1.55□□□□□ -2.16
ATP13A4Q4VNC1 IGKV1-22-201ENST00000524313 326 ntBASIC1.55□□□□□ -2.16
ATP13A4Q4VNC1 RNU1-42P-201ENST00000364033 160 ntBASIC1.54□□□□□ -2.16
ATP13A4Q4VNC1 RNU6-60P-201ENST00000364792 103 ntBASIC1.54□□□□□ -2.16
ATP13A4Q4VNC1 Y_RNA.298-201ENST00000364960 107 ntBASIC1.54□□□□□ -2.16
ATP13A4Q4VNC1 SNORA80D-201ENST00000384488 135 ntBASIC1.54□□□□□ -2.16
ATP13A4Q4VNC1 MT-TN-201ENST00000387400 73 ntBASIC1.54□□□□□ -2.16
ATP13A4Q4VNC1 SNORA75.2-201ENST00000391138 150 ntBASIC1.54□□□□□ -2.16
ATP13A4Q4VNC1 SNORA75.3-201ENST00000391231 150 ntBASIC1.54□□□□□ -2.16
ATP13A4Q4VNC1 RNU6-613P-201ENST00000410412 108 ntBASIC1.54□□□□□ -2.16
ATP13A4Q4VNC1 SNORA70.22-201ENST00000517160 124 ntBASIC1.54□□□□□ -2.16
ATP13A4Q4VNC1 MIR4264-201ENST00000583520 66 ntBASIC1.54□□□□□ -2.16
ATP13A4Q4VNC1 AP000753.3-201ENST00000604083 169 ntBASIC1.54□□□□□ -2.16
ATP13A4Q4VNC1 RNU6-654P-201ENST00000364373 107 ntBASIC1.53□□□□□ -2.16
ATP13A4Q4VNC1 AL591704.2-201ENST00000421658 181 ntBASIC1.53□□□□□ -2.16
ATP13A4Q4VNC1 AC244023.1-201ENST00000426884 112 ntBASIC1.53□□□□□ -2.16
ATP13A4Q4VNC1 RNU7-123P-201ENST00000515911 60 ntBASIC1.53□□□□□ -2.16
ATP13A4Q4VNC1 RNA5SP61-201ENST00000516453 100 ntBASIC1.53□□□□□ -2.16
ATP13A4Q4VNC1 RNU6-1061P-201ENST00000516530 99 ntBASIC1.53□□□□□ -2.16
ATP13A4Q4VNC1 SNORD53B-201ENST00000577887 78 ntBASIC1.53□□□□□ -2.16
ATP13A4Q4VNC1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
ATP13A4Q4VNC1 AC242498.1-201ENST00000604134 111 ntBASIC1.53□□□□□ -2.16
ATP13A4Q4VNC1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
ATP13A4Q4VNC1 Y_RNA.140-201ENST00000363474 103 ntBASIC1.52□□□□□ -2.17
ATP13A4Q4VNC1 Y_RNA.171-201ENST00000363760 102 ntBASIC1.52□□□□□ -2.17
ATP13A4Q4VNC1 Y_RNA.330-201ENST00000365230 109 ntBASIC1.52□□□□□ -2.17
ATP13A4Q4VNC1 SNORD113-1-201ENST00000365321 69 ntBASIC1.52□□□□□ -2.17
ATP13A4Q4VNC1 SNORD116-14-201ENST00000383894 92 ntBASIC1.52□□□□□ -2.17
ATP13A4Q4VNC1 SNORD116-17-201ENST00000383929 92 ntBASIC1.52□□□□□ -2.17
ATP13A4Q4VNC1 SNORD116-15-201ENST00000384445 92 ntBASIC1.52□□□□□ -2.17
ATP13A4Q4VNC1 RNU6-1117P-201ENST00000384525 104 ntBASIC1.52□□□□□ -2.17
ATP13A4Q4VNC1 SNORD116-19-201ENST00000384729 92 ntBASIC1.52□□□□□ -2.17
ATP13A4Q4VNC1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.52□□□□□ -2.17
ATP13A4Q4VNC1 AL354695.1-201ENST00000427935 228 ntBASIC1.52□□□□□ -2.17
ATP13A4Q4VNC1 RNU1-98P-201ENST00000458992 160 ntBASIC1.52□□□□□ -2.17
ATP13A4Q4VNC1 RNU7-107P-201ENST00000459121 61 ntBASIC1.52□□□□□ -2.17
ATP13A4Q4VNC1 RNU7-113P-201ENST00000459273 62 ntBASIC1.52□□□□□ -2.17
ATP13A4Q4VNC1 SNORD79.1-201ENST00000516069 84 ntBASIC1.52□□□□□ -2.17
ATP13A4Q4VNC1 RN7SKP179-201ENST00000516126 217 ntBASIC1.52□□□□□ -2.17
ATP13A4Q4VNC1 RNU6-781P-201ENST00000516377 101 ntBASIC1.52□□□□□ -2.17
ATP13A4Q4VNC1 RNY4P20-201ENST00000516678 93 ntBASIC1.52□□□□□ -2.17
ATP13A4Q4VNC1 RNU6-1258P-201ENST00000516911 111 ntBASIC1.52□□□□□ -2.17
ATP13A4Q4VNC1 MIR377-201ENST00000362145 69 ntBASIC1.51□□□□□ -2.17
ATP13A4Q4VNC1 RNA5SP327-201ENST00000362494 101 ntBASIC1.51□□□□□ -2.17
ATP13A4Q4VNC1 MIR517C-201ENST00000385103 95 ntBASIC1.51□□□□□ -2.17
ATP13A4Q4VNC1 SNORD12C-201ENST00000386307 89 ntBASIC1.51□□□□□ -2.17
ATP13A4Q4VNC1 RNA5SP136-201ENST00000410906 107 ntBASIC1.51□□□□□ -2.17
ATP13A4Q4VNC1 AL512326.2-201ENST00000426359 151 ntBASIC1.51□□□□□ -2.17
ATP13A4Q4VNC1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.51□□□□□ -2.17
ATP13A4Q4VNC1 RNU7-21P-201ENST00000459430 62 ntBASIC1.51□□□□□ -2.17
ATP13A4Q4VNC1 AC113410.1-201ENST00000505029 247 ntBASIC1.51□□□□□ -2.17
ATP13A4Q4VNC1 RNU6-772P-201ENST00000516042 105 ntBASIC1.51□□□□□ -2.17
ATP13A4Q4VNC1 AC004812.1-201ENST00000540773 146 ntBASIC1.51□□□□□ -2.17
ATP13A4Q4VNC1 MIR4303-201ENST00000581299 66 ntBASIC1.51□□□□□ -2.17
ATP13A4Q4VNC1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
ATP13A4Q4VNC1 Y_RNA.127-201ENST00000363386 109 ntBASIC1.5□□□□□ -2.17
ATP13A4Q4VNC1 SNORD58C-201ENST00000365223 64 ntBASIC1.5□□□□□ -2.17
ATP13A4Q4VNC1 Y_RNA.531-201ENST00000384589 121 ntBASIC1.5□□□□□ -2.17
ATP13A4Q4VNC1 SNORD12-201ENST00000391002 90 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 338.3 ms