Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 MIR6717-201ENST00000622747 73 ntBASIC0.24□□□□□ -2.37
RAB40BQ12829 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
RAB40BQ12829 MIR103A1-201ENST00000362165 78 ntBASIC0.23□□□□□ -2.37
RAB40BQ12829 RNU6-740P-201ENST00000364734 105 ntBASIC0.23□□□□□ -2.37
RAB40BQ12829 RNU6-1327P-201ENST00000365302 105 ntBASIC0.23□□□□□ -2.37
RAB40BQ12829 SNORA1-201ENST00000384107 130 ntBASIC0.23□□□□□ -2.37
RAB40BQ12829 MIR616-201ENST00000385293 97 ntBASIC0.23□□□□□ -2.37
RAB40BQ12829 SNORD93-201ENST00000408813 74 ntBASIC0.23□□□□□ -2.37
RAB40BQ12829 AC022523.2-201ENST00000561045 150 ntBASIC0.23□□□□□ -2.37
RAB40BQ12829 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.23□□□□□ -2.37
RAB40BQ12829 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
RAB40BQ12829 snoU2_19.4-201ENST00000364329 80 ntBASIC0.22□□□□□ -2.37
RAB40BQ12829 RNU6-1228P-201ENST00000391014 107 ntBASIC0.22□□□□□ -2.37
RAB40BQ12829 SNORA26.6-201ENST00000391256 115 ntBASIC0.22□□□□□ -2.37
RAB40BQ12829 RNU6-985P-201ENST00000410182 104 ntBASIC0.22□□□□□ -2.37
RAB40BQ12829 RNA5SP237-201ENST00000410414 113 ntBASIC0.22□□□□□ -2.37
RAB40BQ12829 TRBVB-201ENST00000477100 408 ntBASIC0.22□□□□□ -2.37
RAB40BQ12829 RNU6-453P-201ENST00000516819 85 ntBASIC0.22□□□□□ -2.37
RAB40BQ12829 MIR3678-201ENST00000578455 94 ntBASIC0.22□□□□□ -2.37
RAB40BQ12829 SNORA25.18-201ENST00000607153 114 ntBASIC0.22□□□□□ -2.37
RAB40BQ12829 AP001282.2-201ENST00000616149 309 ntBASIC0.22□□□□□ -2.37
RAB40BQ12829 Y_RNA.23-201ENST00000362496 106 ntBASIC0.21□□□□□ -2.38
RAB40BQ12829 Y_RNA.36-201ENST00000362602 112 ntBASIC0.21□□□□□ -2.38
RAB40BQ12829 RNU6-653P-201ENST00000363074 106 ntBASIC0.21□□□□□ -2.38
RAB40BQ12829 Y_RNA.237-201ENST00000364439 102 ntBASIC0.21□□□□□ -2.38
RAB40BQ12829 RNY1P4-201ENST00000384595 115 ntBASIC0.21□□□□□ -2.38
RAB40BQ12829 RNU6-713P-201ENST00000384761 107 ntBASIC0.21□□□□□ -2.38
RAB40BQ12829 RNU4-83P-201ENST00000410863 133 ntBASIC0.21□□□□□ -2.38
RAB40BQ12829 SNRPGP12-201ENST00000449481 213 ntBASIC0.21□□□□□ -2.38
RAB40BQ12829 SNORD2.1-201ENST00000458762 69 ntBASIC0.21□□□□□ -2.38
RAB40BQ12829 RNU7-80P-201ENST00000459562 61 ntBASIC0.21□□□□□ -2.38
RAB40BQ12829 AL356055.1-201ENST00000602528 446 ntBASIC0.21□□□□□ -2.38
RAB40BQ12829 U2.14-201ENST00000615943 113 ntBASIC0.21□□□□□ -2.38
RAB40BQ12829 SNORD44.1-201ENST00000363202 61 ntBASIC0.2□□□□□ -2.38
RAB40BQ12829 Y_RNA.454-201ENST00000384224 113 ntBASIC0.2□□□□□ -2.38
RAB40BQ12829 SNORA8.2-201ENST00000384372 139 ntBASIC0.2□□□□□ -2.38
RAB40BQ12829 Y_RNA.542-201ENST00000384641 111 ntBASIC0.2□□□□□ -2.38
RAB40BQ12829 Y_RNA.567-201ENST00000384736 106 ntBASIC0.2□□□□□ -2.38
RAB40BQ12829 Y_RNA.590-201ENST00000410140 107 ntBASIC0.2□□□□□ -2.38
RAB40BQ12829 RNU6-651P-201ENST00000411040 105 ntBASIC0.2□□□□□ -2.38
RAB40BQ12829 AC108740.1-201ENST00000498629 225 ntBASIC0.2□□□□□ -2.38
RAB40BQ12829 Y_RNA.679-201ENST00000516416 91 ntBASIC0.2□□□□□ -2.38
RAB40BQ12829 MIR3129-201ENST00000581095 76 ntBASIC0.2□□□□□ -2.38
RAB40BQ12829 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
RAB40BQ12829 MIR376A2-201ENST00000636782 80 ntBASIC0.2□□□□□ -2.38
RAB40BQ12829 Y_RNA.82-201ENST00000363000 102 ntBASIC0.19□□□□□ -2.38
RAB40BQ12829 Y_RNA.92-201ENST00000363043 102 ntBASIC0.19□□□□□ -2.38
RAB40BQ12829 RNA5SP62-201ENST00000363457 110 ntBASIC0.19□□□□□ -2.38
RAB40BQ12829 Y_RNA.235-201ENST00000364412 102 ntBASIC0.19□□□□□ -2.38
RAB40BQ12829 Y_RNA.306-201ENST00000365015 102 ntBASIC0.19□□□□□ -2.38
RAB40BQ12829 Y_RNA.312-201ENST00000365089 102 ntBASIC0.19□□□□□ -2.38
RAB40BQ12829 Y_RNA.322-201ENST00000365151 102 ntBASIC0.19□□□□□ -2.38
RAB40BQ12829 RNU6-639P-201ENST00000384074 107 ntBASIC0.19□□□□□ -2.38
RAB40BQ12829 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
RAB40BQ12829 SNORA79-201ENST00000408376 140 ntBASIC0.19□□□□□ -2.38
RAB40BQ12829 Y_RNA.650-201ENST00000459002 102 ntBASIC0.19□□□□□ -2.38
RAB40BQ12829 Y_RNA.777-201ENST00000516982 102 ntBASIC0.19□□□□□ -2.38
RAB40BQ12829 AC133485.4-201ENST00000561835 220 ntBASIC0.19□□□□□ -2.38
RAB40BQ12829 MIR5197-201ENST00000583721 112 ntBASIC0.19□□□□□ -2.38
RAB40BQ12829 Y_RNA.771-201ENST00000598668 102 ntBASIC0.19□□□□□ -2.38
RAB40BQ12829 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.19□□□□□ -2.38
RAB40BQ12829 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.19□□□□□ -2.38
RAB40BQ12829 MIR8066-201ENST00000617280 78 ntBASIC0.19□□□□□ -2.38
RAB40BQ12829 AL662814.1-201ENST00000617364 121 ntBASIC0.19□□□□□ -2.38
RAB40BQ12829 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.19□□□□□ -2.38
RAB40BQ12829 Y_RNA.789-201ENST00000622480 102 ntBASIC0.19□□□□□ -2.38
RAB40BQ12829 AC091932.4-201ENST00000623386 200 ntBASIC0.19□□□□□ -2.38
RAB40BQ12829 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.19□□□□□ -2.38
RAB40BQ12829 AL596211.1-201ENST00000569873 2277 ntBASIC0.18□□□□□ -2.38
RAB40BQ12829 SNORD118-201ENST00000363593 134 ntBASIC0.18□□□□□ -2.38
RAB40BQ12829 SNORA33.2-201ENST00000365413 134 ntBASIC0.18□□□□□ -2.38
RAB40BQ12829 MIR193B-201ENST00000384907 83 ntBASIC0.18□□□□□ -2.38
RAB40BQ12829 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.18□□□□□ -2.38
RAB40BQ12829 RNU6-469P-201ENST00000516253 101 ntBASIC0.18□□□□□ -2.38
RAB40BQ12829 MIR3152-201ENST00000579801 74 ntBASIC0.18□□□□□ -2.38
RAB40BQ12829 RNU6-349P-201ENST00000362402 107 ntBASIC0.17□□□□□ -2.38
RAB40BQ12829 Y_RNA.42-201ENST00000362660 108 ntBASIC0.17□□□□□ -2.38
RAB40BQ12829 SNORD114-26-201ENST00000363543 72 ntBASIC0.17□□□□□ -2.38
RAB40BQ12829 RNU6-597P-201ENST00000365620 102 ntBASIC0.17□□□□□ -2.38
RAB40BQ12829 Y_RNA.430-201ENST00000384081 110 ntBASIC0.17□□□□□ -2.38
RAB40BQ12829 Y_RNA.540-201ENST00000384638 111 ntBASIC0.17□□□□□ -2.38
RAB40BQ12829 SNORA20-201ENST00000384662 132 ntBASIC0.17□□□□□ -2.38
RAB40BQ12829 Y_RNA.617-201ENST00000410920 90 ntBASIC0.17□□□□□ -2.38
RAB40BQ12829 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.17□□□□□ -2.38
RAB40BQ12829 AP003327.1-201ENST00000529684 127 ntBASIC0.17□□□□□ -2.38
RAB40BQ12829 AL365265.1-201ENST00000621045 234 ntBASIC0.17□□□□□ -2.38
RAB40BQ12829 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.17□□□□□ -2.38
RAB40BQ12829 RNU6-403P-201ENST00000363163 104 ntBASIC0.16□□□□□ -2.38
RAB40BQ12829 Y_RNA.176-201ENST00000363815 109 ntBASIC0.16□□□□□ -2.38
RAB40BQ12829 RNU6-728P-201ENST00000365375 104 ntBASIC0.16□□□□□ -2.38
RAB40BQ12829 RNU6-1109P-201ENST00000391187 107 ntBASIC0.16□□□□□ -2.38
RAB40BQ12829 RNU6-381P-201ENST00000391259 108 ntBASIC0.16□□□□□ -2.38
RAB40BQ12829 Y_RNA.618-201ENST00000410949 107 ntBASIC0.16□□□□□ -2.38
RAB40BQ12829 RNU6-561P-201ENST00000516222 102 ntBASIC0.16□□□□□ -2.38
RAB40BQ12829 RNU7-70P-201ENST00000516941 66 ntBASIC0.16□□□□□ -2.38
RAB40BQ12829 AL442663.2-201ENST00000554385 511 ntBASIC0.16□□□□□ -2.38
RAB40BQ12829 MIR924-201ENST00000638017 53 ntBASIC0.16□□□□□ -2.38
RAB40BQ12829 MIR335-201ENST00000362173 94 ntBASIC0.15□□□□□ -2.39
RAB40BQ12829 Y_RNA.13-201ENST00000362403 112 ntBASIC0.15□□□□□ -2.39
RAB40BQ12829 RNU4-17P-201ENST00000365598 141 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 541.1 ms